Os09g0348800

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Revision as of 07:22, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0348800| Description = Conserved hypothetical protein| Version = NM_001069485.1 GI:115478712 GeneID:4346816| Length = 3674 bp| Definition ...")
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Gene Name

Os09g0348800

Description

Conserved hypothetical protein

Version

NM_001069485.1 GI:115478712 GeneID:4346816

Length

3674 bp

Definition

Oryza sativa Japonica Group Os09g0348800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:11543314..11546987

Sequence Coding Region

11543618..11543707,11543818..11543892,11544033..11544500,11544830..11544940,11545024..11545200
,11545284..11545481,11545652..11545865,11545941..11546191

Expression

GEO Profiles:Os09g0348800

Genome Context

<gbrowseImage1> name=NC_008402:11543314..11546987 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:11543314..11546987 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcggcgcttgagcttaggcaatagggaggcttccaattgttcagatcaggcagtgagtggtgctaccttgcccagatgcagtacaaggtcctcatgttcccaacaacctaatcattctcctaatttggatgaggagattttggaggaggaagaaacatctgaggaaatctggtttcgtggtcctacacgtgtgccaccacaacctacccgagaggaggacaaacctgtgctgactccagtaggagacaggcaatggcgagcaaatgattatggaggcaacattagggtccccaatagcatcctgacattacttcttaaacaatggttccctggcattgtcacattgaagggtaaagaggagccagcatggagttggaaacattacaggatagcgccggatactccaagaagcaatcaaatacggctgccaagctgtctccatcgtgttgaggaagacttctggctttacttcaggtgggcagagggaaaagaacaagaagctagaaaggttgtccacaattgtgtcaagggccttgttgatcgcttgttttatgaaactcgcatcctagctgtgcttaattaccaaaggaaaatcctgaaggtgaacacttccagagaaatcgcatgcagaacttatcttacagagagcgagtacctaaaggtagaaccatggtggttcctgaattcagaaaatgcatggcgggagttgatacgattgcggtggtgtaatccaaaatggcaggctgtctcacgtgctcataggatacggagggagaaaatgaaagggccatctcaccgccaaggcagtgctaacttgagccgttaccaaaaaaatttggagaagaagaaaaagcggccagttgctccactagaggcctacacagaaggaaggagggaaaatcgagaggatggacaattcagctgtgacccgcgtgtagctgagaagcttgaggcctatgctgcagcttatgttcagttgcatgggccagaaaatgattggcgcacttctcccattgatcctgtcgctgtgcacatggctggtggtggaaagaaacatggccgtttcatgattggtgatggactcattgactcatcagcagtgtttggtgataattcgcgtgatgatcaacgccctcgcagaagattgaggacagatcatgacaacacaaaccaggttgaagaccttctgcggcaactacaagaggagcgcgaggcaagggagcgagagcgtgaagagagggagcgtgagaaggagagggagcggcaggagaaggagcaggagaaggagtgtgagcgtgaagagagggcgcgagagaaggagcaggagcgtaaggagagggaggaagagcgcaaggagagggagttggaaaagatagcctctcaacagaaatcagcattctttgaagctgctttaagggtgatacaaagtaagctgaacatagacttgtcagcttcaggcacacctcccttacctgtcatgttgactcacctagcttcgtctggacctgtggcttcgaatggaaactcaggccccaaccatgttggggttggtgctgcatctggtgcaattgtcaacttttag</cdnaseq>

Protein Sequence

<aaseq>MRRLSLGNREASNCSDQAVSGATLPRCSTRSSCSQQPNHSPNLD EEILEEEETSEEIWFRGPTRVPPQPTREEDKPVLTPVGDRQWRANDYGGNIRVPNSIL TLLLKQWFPGIVTLKGKEEPAWSWKHYRIAPDTPRSNQIRLPSCLHRVEEDFWLYFRW AEGKEQEARKVVHNCVKGLVDRLFYETRILAVLNYQRKILKVNTSREIACRTYLTESE YLKVEPWWFLNSENAWRELIRLRWCNPKWQAVSRAHRIRREKMKGPSHRQGSANLSRY QKNLEKKKKRPVAPLEAYTEGRRENREDGQFSCDPRVAEKLEAYAAAYVQLHGPENDW RTSPIDPVAVHMAGGGKKHGRFMIGDGLIDSSAVFGDNSRDDQRPRRRLRTDHDNTNQ VEDLLRQLQEEREAREREREEREREKERERQEKEQEKECEREERAREKEQERKEREEE RKERELEKIASQQKSAFFEAALRVIQSKLNIDLSASGTPPLPVMLTHLASSGPVASNG NSGPNHVGVGAASGAIVNF</aaseq>

Gene Sequence

<dnaseqindica>3281..3370#3096..3170#2488..2955#2048..2158#1788..1964#1507..1704#1123..1336#797..1047#agtccccatccccacccccgccgcttcacttctcccctctcggtctctccgttcacggccggccgtgcgtccccggctaggccggcgagggtggcagcgcgtccccggtcgacgaggggtcgcatcccactccatctacgaggccctgtacgtccacgtccatccaggcatccactgcgctgaccagtacatcctcgtcaagctgtgcagcaaggctccccagtccccgatcaagaagcaactgagcagggtgaggtattacacagctacatcctcctatccggcgtggtgtgtgagtggttcttgaatcttatgcaatgatggttcttgattctgggaaatagacgtccttttctttctgaatccagaaagagttcgttgtctgatttatatggactgcatctcagttgaaaatctagtttatatcaacaccatgatcgctatgaaataagctgcagtgctgtgtaaataaaaaagcaaaccctgataactacaaaatgatgtgggtgagagtccttgtagcgtcagactaaacggttttcaaatttttgtacatgtcaatagatgcatattattggttaggctgagagttagccacgtccctacttgtttagcttgttgctggatgttgaatggggatgattcgttccatattttgtgatcatctgaactgctacattgtttgtaaccttatatgtacattttattataccatgaaccatgttgctgcggcactgctatgtactgccatttgatctgtttcatataatacttcaaaccttaattttctaggaatatgcggcgcttgagcttaggcaatagggaggcttccaattgttcagatcaggcagtgagtggtgctaccttgcccagatgcagtacaaggtcctcatgttcccaacaacctaatcattctcctaatttggatgaggagattttggaggaggaagaaacatctgaggaaatctggtttcgtggtcctacacgtgtgccaccacaacctacccgagaggaggacaaacctgtgctgactccagtaggagacaggtaaaaaggctatttttgtattttccattatgttgaatatgaaggactgatctacctgtttgttgatatgcacaggcaatggcgagcaaatgattatggaggcaacattagggtccccaatagcatcctgacattacttcttaaacaatggttccctggcattgtcacattgaagggtaaagaggagccagcatggagttggaaacattacaggatagcgccggatactccaagaagcaatcaaatacggctgccaagctgtctccatcgtgttgaggaagacttctgggtttgtttgtgaacatttccttctctaatttggagtacatcgcacattttattatatctgtatttttcctagtttagggcctgtttggatagtaaaatatcgatatgccacaatatttgaataccatagtttttagtgtcaagcaggcctttaacttttcatagctgcagctttacttcaggtgggcagagggaaaagaacaagaagctagaaaggttgtccacaattgtgtcaagggccttgttgatcgcttgttttatgaaactcgcatcctagctgtgcttaattaccaaaggaaaatcctgaaggtgaacacttccagagaaatcgcatgcagaacttatcttacagagagcgagtacctaaaggtgatatgattgaacatttataatttattgttgtttgctaaatagattagtaattaatgaatatgtctgtgcttctcctataggtagaaccatggtggttcctgaattcagaaaatgcatggcgggagttgatacgattgcggtggtgtaatccaaaatggcaggctgtctcacgtgctcataggatacggagggagaaaatgaaagggccatctcaccgccaaggcagtgctaacttgagccgttaccaaaaaaatttggtatgtgcatctctgtttaaacatgtaggagattctggccaaagaaaatctgacataatttatattctatctatgtcatataggagaagaagaaaaagcggccagttgctccactagaggcctacacagaaggaaggagggaaaatcgagaggatggacaattcagctgtgacccgcgtgtagctgagaagcttgtaagtgctaaatattttgtggtgcaaatcagatagtgtcttttacttatcatgattatgtgttgtcagtaatggttgtcaaaacacttatgcatgaatagctagcaatgagccccaaaaatggtgatacacttggaaattttgcaaagcatgttgctattatattggaataagtggaggaacttgcaaatgttgtgctgatgcatatatatgagtattttatatcgtgtatcatctatgcaagttgagcaggagtgatgatgaatcatagacgtagttcatcattttttacattagaactaatttaagatatgatctgattgcaacaggaggcctatgctgcagcttatgttcagttgcatgggccagaaaatgattggcgcacttctcccattgatcctgtcgctgtgcacatggctggtggtggaaagaaacatggccgtttcatgattggtgatggactcattgactcatcagcagtgtttggtgataattcgcgtgatgatcaacgccctcgcagaagattgaggacagatcatgacaacacaaaccaggttgaagaccttctgcggcaactacaagaggagcgcgaggcaagggagcgagagcgtgaagagagggagcgtgagaaggagagggagcggcaggagaaggagcaggagaaggagtgtgagcgtgaagagagggcgcgagagaaggagcaggagcgtaaggagagggaggaagagcgcaaggagagggagttggaaaagatagcctctcaacagaaatcagcattctttgaagctgctttaagggtaagtggtataactttacttggtcaagttgaatttgtttgctattgcttataagacacagctagtagtgtttttatcattatagaatttgaattttgggttggtcgcactcactagtgtacatgtgaaatggattgcaggtgatacaaagtaagctgaacatagacttgtcagcttcaggcacacctcccttacctgtcatgttgactcacctagtaagtatttgatacatggtagtctgtaatatcttttgcatgagtaattatttcccatttaacttatgagaggactaatattaaatcatttggtttgaaatataaaacaggcttcgtctggacctgtggcttcgaatggaaactcaggccccaaccatgttggggttggtgctgcatctggtgcaattgtcaacttttagcatgacagcggactagttgtacattcctaaaactatggatatattttgtaactaaactgacctggatggtcatggccatgaacttggatagctgttggttgtggttgtctcactaagtagtcttttgttaattatgtaggtttacctgaactttaggccacatggaactctagtagatgttcgctgtgtctgttgccttaggttggctgcctgttgccttttggtcatatatgttgccatgttggcatgcgctggaacttgtgaactggaagttcggttcttttggtcatatatgttggcatgc</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0348800, RefSeq:Os09g0348800