Os11g0615800

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Revision as of 09:16, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0615800| Description = DNA repair protein RAD51 family protein| Version = NM_001074811.1 GI:115486270 GeneID:4350923| Length = 3897 bp| De...")
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Gene Name

Os11g0615800

Description

DNA repair protein RAD51 family protein

Version

NM_001074811.1 GI:115486270 GeneID:4350923

Length

3897 bp

Definition

Oryza sativa Japonica Group Os11g0615800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:25785223..25789119

Sequence Coding Region

25785312..25785398,25786773..25786914,25786988..25787101,25787192..25787283,25787370..25787464
,25787542..25787655,25788249..25788378,25788506..25788627,25788721..25788844

Expression

GEO Profiles:Os11g0615800

Genome Context

<gbrowseImage1> name=NC_008404:25785223..25789119 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:25785223..25789119 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcgacgtcggcggcggcgtcggcggcggcggagcagcagcaggaggagggggagcacgggccgttccccatcgagcagctgcaggcatctggaattgctgctctggatgtgaaaaagctcaaggattctggtctgtacacagtggagtctgtggcctatactccaaggaaagaccttttgcaaatcaaaggaattagtgaagccaaagttgacaagatagttgaagcagcatcgaagctagtcccattgggatttacaagtgcgagccaacttcatgcacaaaggctggagattattcaagttacaactggatctagagagcttgataagattttggatggggggatagaaactggctctatcacagagatttatggtgaattccgatcagggaagactcagctgtgccacacgctgtgtgtcacatgtcagcttccattggaccaaggtggtggtgaagggaaggctttgtacattgatgcagagggaacattcagaccacaaaggctgctccagatagctgacaggttcgggttgaatggtgctgatgtattagagaacgtggcttatgccagagcttataatactgatcatcaatcaagacttctgctggaggcagcttccatgatgatagagactaggtttgctctcatgattgtagacagcgcgacagctttgtacagaactgatttctcaggtcgaggggagctctcagcgaggcaaatgcacatggctaagtttctgaggagccttcagaaattagcagatgagtttggagtggctgtggttatcactaatcaagtagtggcacaagtggatggttctgccatgtttgctgggccgcagatcaaacccatcggtggaaacatcatggctcatgcttccacaacaaggcttgctcttcgcaagggaagaggggaagagcgaatatgtaaagtgataagctctccatgcttggctgaagccgaagcaaggtttcagatagcatctgaaggcgttgcagatgtcaaggattga</cdnaseq>

Protein Sequence

<aaseq>MSTSAAASAAAEQQQEEGEHGPFPIEQLQASGIAALDVKKLKDS GLYTVESVAYTPRKDLLQIKGISEAKVDKIVEAASKLVPLGFTSASQLHAQRLEIIQV TTGSRELDKILDGGIETGSITEIYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKALYI DAEGTFRPQRLLQIADRFGLNGADVLENVAYARAYNTDHQSRLLLEAASMMIETRFAL MIVDSATALYRTDFSGRGELSARQMHMAKFLRSLQKLADEFGVAVVITNQVVAQVDGS AMFAGPQIKPIGGNIMAHASTTRLALRKGRGEERICKVISSPCLAEAEARFQIASEGV ADVKD</aaseq>

Gene Sequence

<dnaseqindica>90..176#1551..1692#1766..1879#1970..2061#2148..2242#2320..2433#3027..3156#3284..3405#3499..3622#gttgccgccttcaattccattcgaacgaaacgaggagaagagagaggagagaggagagagaggggtttgtgtggctgcgagtgggccccatgtcgacgtcggcggcggcgtcggcggcggcggagcagcagcaggaggagggggagcacgggccgttccccatcgagcagctgcaggtactggctcgtcgtaaccctagcggagttcttgtgctgtgtcttctcttcttccgccccaaatggggggttttccaagggcgggtgtttcttggggattctgatccgcgtagtggtggggtggggggaggggggaatcgtgatgggttcttggagatttggtgtgtggtttaggttcttgcggtgttgtgggagattcttggtggaagaaccctaggttcttggaatcttggttcggtttcttgcccctggatggcgtcaaggtcgcgtctttcttggaattatcgccatttgtatgtgaaattgggacgggtttttcctggtatttttgttgtgtttgggcggattaggtgtttccgtggattcttgccggggaaagtgaaaccctatgttcctgattcgccccttctcccaaatgtgtcaagattcaagaacgagcatttcttggaatttccttttgtgtttgcggcttacgaaagaggggatattctcccagttctgtattgaagctggctatttagtttcttttttttttgcccttttttaggtataggaaacataatctttattaggggcatctaggtattcatggttcgttcttccccaaaatggattaaggttaggcttttctgaaatctgtgcagtttattgtggcgcggtcatgattcgtataagtccaaagagggggattcttgattaggcttttggggaggcgtttcttgggagttcataacttgccttttctccctgtatttggcagtaagacgatttttaattcactgtttagggcatgtgaagccagcatttaaaatgctaattctctcaatttgccatcatattttaaccgtaggctgtcctgtggattcttgtgttttcacttttggaacttgtttgcaaatcggtctggtggtaggctgtagcagcttgtattaattaatttattaattcctgaaagcctattatacgtatgatgtttcaggttgttcctttatgaataacatgtaaaaaaaagaggaaatcgttgtttgatcatagtactgttaatatggtaaataagttaagaatggatgcactcctattccttagtgatatactattttctttgcaatacaagtgacctgctgtacaaataatatctcatgatatttctcctcatcaatgatgcctagtagaattaaccattcttaatggtagttgcaattgcaagaataagaagtgccattatttcttgtattgttgtatgttcagtacttcagtgccatctaaaaagcttctgaggtgtagctagtgacaagctagtgtctgtttctatgtaaaaattatcatagtgatcgctcttctatcattaactcttgtgtgtaatttgtggttaaggcatctggaattgctgctctggatgtgaaaaagctcaaggattctggtctgtacacagtggagtctgtggcctatactccaaggaaagaccttttgcaaatcaaaggaattagtgaagccaaagttgacaagatagttgaagcaggcaagtaattatgaggctcagtacgactttgtatttcacactgcaaagttcctaactgtctaaaattttacagcatcgaagctagtcccattgggatttacaagtgcgagccaacttcatgcacaaaggctggagattattcaagttacaactggatctagagagcttgataagattttggatggtattgaactgttaactttcatggttttctttaatttcttcagaaatgtactgcttgtgatcattgagcaattctattttgaccaaacaggggggatagaaactggctctatcacagagatttatggtgaattccgatcagggaagactcagctgtgccacacgctgtgtgtcacatgtcaggtgacagcttattgatccaactcttatttcattgcgcacctgaatcctgttggtaagctaaattatgttaatgattgatattgcagcttccattggaccaaggtggtggtgaagggaaggctttgtacattgatgcagagggaacattcagaccacaaaggctgctccagatagctgacaggtgattcattatttataatgattattctgtgctctaacataaatttgattgctcaacaagtgaaaattggattgtaggttcgggttgaatggtgctgatgtattagagaacgtggcttatgccagagcttataatactgatcatcaatcaagacttctgctggaggcagcttccatgatgatagagactaggtaagttctaagttttttgctctttagtttttgagtgtacctctgaactctatgctatgttgcatacacaacttacaccagtatgctttacttgatttagatataggtggccagcagtaggaaactaagttgatagtacttgtccttatgaatctaagtgattatgtaatgccaacaaaccttagtttctgtagtaacctttttggcccgtatgacagactaagttgcacgcatctcttccatcaaaacagaagtgaacttcagtactccattgctgtctattgctatagtactgagtttacacttcaagcaacttggaatggtaggatgcccaaagtaatggctcatgattacagatgcttctattatgatgagtggattcgagctaaattttgttatgtggtgcttgttattttctttcaaggtcaacatatgtttgattctgtttgcacaaaatccttatttaaacatgggaaaataactgatacatatttcattgatttttagttatggttgttcttcagacaagtacctaacataatattgaattaggtgttcctccatagttcttatttgaatcttcacatgtgcaggtttgctctcatgattgtagacagcgcgacagctttgtacagaactgatttctcaggtcgaggggagctctcagcgaggcaaatgcacatggctaagtttctgaggagccttcagaaattagcagatgaggttagttcttttctattgtctttctttaaaggaaacatggtacttatatcagcagaataaccatagaccatagtccttactctggcatgtttcaatatcctaaatttggtttgcttactcactgtagtttggagtggctgtggttatcactaatcaagtagtggcacaagtggatggttctgccatgtttgctgggccgcagatcaaacccatcggtggaaacatcatggctcatgcttccacaacaaggtccattactgagaaacccaatcgaacctgttaatcctgacttctttcatgttcctaattcacgttcttacatgccaatactgtgtacaccaggcttgctcttcgcaagggaagaggggaagagcgaatatgtaaagtgataagctctccatgcttggctgaagccgaagcaaggtttcagatagcatctgaaggcgttgcagatgtcaaggattgagacaatctctgctcagtgctaagcgctaactggcaacagcttcccagttcccacatgtgttgctctcctgctgattgcgctaccacccctgaagggttcaactgatgtgatgctcctgttctgaatccgacaaccacttattgtcgagtggaggtgcacatctgtgtcactgttgtagtgttgtagtataaaacgttgtctgccctgcaaggctgcaatgcatgtaatgtgacattggtttacagatattgaatgaattgaagtaagttttctgc</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0615800, RefSeq:Os11g0615800