BGIOSGA022997

From RiceWiki
Revision as of 13:26, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA022997| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA022997, complete gene.| tag = OsI_231...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA022997

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA022997, complete gene.

LocusTag

OsI_23140

Ensembl Transcript ID

BGIOSGA022997-TA

Ensembl Protein ID

BGIOSGA022997-PA

Length

3133

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:19128135..19131267

Sequence Coding Region

19128135..19128856,19130619..19131267

Genome Context

<gbrowseImage1> name=IndicaChromosome06:19128135..19131267 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:19128135..19131267 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGCTGCCGGTGCCGGACGACGCCTTCGCCGAGATCCTCGGCCGCCTGCCGCCCAAGAGCCTCGCCGTCGCGAGGTGCGTCTGCAAGCCATGGCGCGAGCTCGTCGACGGCCGCGGGCTGCTGCTCCGGCGCCTCCTGCCGCGCTCGGTGGACGGCGTCCTCTTCAACTACGTCGGCCACCACCGCCCGCACCTCCTCTCCCGCCGCCGCCCCTCCTCCTCGTCGTCGTCTTCGGTGCCGGCGTCGTGCGGCGGCGGCAGGGTCGACGGCGACCTCACCGCCTCCGTGCCCGCCGGCGACCGCGCATGGTGGGCCGTCGTGGACCACCGCGACGGCCTCCTCCTCTGCGACGTCTACTGGGGCAGCCGCCTCTTCGTCTGCAACCCGGCGACGCGGCGGTGGGCGACGCTGCCGCAGCCGCCGCCGGAGCGCGAGCCCGCCGCCGCGTGCGCCGGCGGCAAGTACCTCGCGTTCGATCCGGCCGTGTCGCCGCACTACGAGGTGCTCTTGATCCCCGCCTTGCCGGAGAAGGCGGCGGAGGATGCCGTCGACGGCGATGAGGCCGCCGCCGCCTATCTGTCGATGGAGTGGCCGCCGTCGCCGTACAAGGTGGAGGTGTTCTCGTCGGAGACGGGGCGGTGGGAGGAGAGGGTGTTCGTCCGGGAAGAAGAAGGCGAGGCGGCGGCGGCGACGACGGTGGAGGACATGAAATCATGGGAGTTTTCAATGTCAAGTAACAAGTACCAAATAATTAAAACTCCAATAATCATTCGGAACAACATGTTTGTCAGACCATATTTAGGCAAATCTAAGATGGGTGTGTCATTTGGATTTATTGATGATTATCAACTCTCAGTCTGGATCCTCAAAGAATCAGCTGGACAAATTAAGTGGGTCTTAAGTTACCAACATGACCTTTGGGCAGCGATCAATCAAGTAGATTCGTTTGATTTTGGTGGTCACCAGATTAATGGGCCTTGGGTCTTAGAAGAGACCATCCCAAAATACAGAACAATTGAAAACAAGGAGACTCTCTCAGACAAAGAGTGGGATTCCGACAATGATGATTTTCTTGATACTGAAGTTGATGATTTTCTAATTGATACTGAAGTTGATGATGAGGGACATAACGATTTTGCATACTTTCGTATCCTTGGATTTCATCCTTACAAGGAAGTCATTTTCTTAGAAGAAACATTACGAACATTTGCCTATCATTATAATAGCTCAAAGATTCAATACTTGGGCTACTCATGCCCTAAATATTGCTACGGAAGATACACAATACATGAGTCGTTCGTGTACACTCCCGGCATGATTGGAGAGCTTAATGGACACTATGCTGCAGGGCAGAGCTCACCTCAATGA</cdnaseq>

Protein Sequence

<aaseq>MALPVPDDAFAEILGRLPPKSLAVARCVCKPWRELVDGRGLLLRRLLPRSVDGVLFNYVGHHRPHLLSRRRPSSSSSSSVPASCGGGRVDGDLTASVPAGDRAWWAVVDHRDGLLLCDVYWGSRLFVCNPATRRWATLPQPPPEREPAAACAGGKYLAFDPAVSPHYEVLLIPALPEKAAEDAVDGDEAAAAYLSMEWPPSPYKVEVFSSETGRWEERVFVREEEGEAAAATTVEDMKSWEFSMSSNKYQIIKTPIIIRNNMFVRPYLGKSKMGVSFGFIDDYQLSVWILKESAGQIKWVLSYQHDLWAAINQVDSFDFGGHQINGPWVLEETIPKYRTIENKETLSDKEWDSDNDDFLDTEVDDFLIDTEVDDEGHNDFAYFRILGFHPYKEVIFLEETLRTFAYHYNSSKIQYLGYSCPKYCYGRYTIHESFVYTPGMIGELNGHYAAGQSSPQ</aaseq>

Gene Sequence

<dnaseqindica>1..722#2485..3133#ATGGCGCTGCCGGTGCCGGACGACGCCTTCGCCGAGATCCTCGGCCGCCTGCCGCCCAAGAGCCTCGCCGTCGCGAGGTGCGTCTGCAAGCCATGGCGCGAGCTCGTCGACGGCCGCGGGCTGCTGCTCCGGCGCCTCCTGCCGCGCTCGGTGGACGGCGTCCTCTTCAACTACGTCGGCCACCACCGCCCGCACCTCCTCTCCCGCCGCCGCCCCTCCTCCTCGTCGTCGTCTTCGGTGCCGGCGTCGTGCGGCGGCGGCAGGGTCGACGGCGACCTCACCGCCTCCGTGCCCGCCGGCGACCGCGCATGGTGGGCCGTCGTGGACCACCGCGACGGCCTCCTCCTCTGCGACGTCTACTGGGGCAGCCGCCTCTTCGTCTGCAACCCGGCGACGCGGCGGTGGGCGACGCTGCCGCAGCCGCCGCCGGAGCGCGAGCCCGCCGCCGCGTGCGCCGGCGGCAAGTACCTCGCGTTCGATCCGGCCGTGTCGCCGCACTACGAGGTGCTCTTGATCCCCGCCTTGCCGGAGAAGGCGGCGGAGGATGCCGTCGACGGCGATGAGGCCGCCGCCGCCTATCTGTCGATGGAGTGGCCGCCGTCGCCGTACAAGGTGGAGGTGTTCTCGTCGGAGACGGGGCGGTGGGAGGAGAGGGTGTTCGTCCGGGAAGAAGAAGGCGAGGCGGCGGCGGCGACGACGGTGGAGGACATGAAATCATGGGAGTATGTTTCGCGCGGCCACGTCAAGGGTACAGCGTGTCTGGAAAGGAGCACTGTATGTGCATTCTGGAGGTCATTTTGTTACAAGGTATTATCCCTCTGTTTTATATTATAAGTCGTTTTGGTTTTTTTTCTAGCTATTTTTTTAAGAGTAAATCTCACAAAACTACATGTTTTATGGTTCAAGTTGTATAAAACAACACACATTTTGACACTTGGCACTTAAGTACATATATTTTGGTAGTTTAGTTTCACAAAACCACACTATCGATGAATGGATTCACCCGTAAGATGACGTGGTTGTTCCATCTAGGATGATGACGTTGCATCCTATTAATTTCGTGTGATGGCTGGTAATAGAATGCCATGTCCTCGTCCTAGGTGAAACAACCACGTCATCTCGTGGGTGAATCCATTCATTGATAGTGTGGTTTTGTGAAACTATACTACCAAAATATATGTACTCAAGTGCTAAGTATCAAAGTGTGTGTGGTTTTCTTCAACTTAGACCACAAAATGTGTAGTTTTGTGAAATTTACTCTTTTTTTAAAGTATGATCAAGTTTATAAAATACTTTAATAGCAGTTATAACACCAAATTAGTTTCATTACAATCAACATTTAATATATGTTTGTTTTGTGTCCAAAATTTTGCTATATTTTTATATAAATTTTGGCAAAATTGAAAGAAGTTTGATTGGACAACAACTTATAATATGACACGGAGGGAGTAAGGCAAGTAAGCATCACCAGCCTATGATTCATACATATATAAAGGGTATTTTGATTGAATTCCCAAAATAGGATATTGGTTTCTTCCTCTTGTTCCTGATGATACTATAATATCATGGCGAACGTATATCTTCGCTAACTAATCCGAATTATTCTGAAGAATAGAAGGATAGACAAAATCCCAATGACCATCGGACATGATTAAATCTGACATTGAATAATTGAGAATTTCCTTGTGTTTTTTTATCAAAAGTATCCAACAATCTATGCTTACCTCATTATCAGCCAATAGGGATGGCAATTTTGCCCATTGGTCTAGCTATCCGCGGATATCCGACCAGATACATATGTATTAGCTAATTTCGACTCATCTCTCTTAAGGCTTATACCCCTTTATCTTGGTTCATTTGTGATGCTAACGGATAATAAGTTGTGATGTAATTCAAATTATTGTTAATAACTAATAATTTAGTAAATTATTGATTTTATTTCTCTTTGTTAAATTAACCTCTTTCGAGTTATTATTCATGTGAGATTCATTGGGTACCCGCCAGCCACGCATACCCGTGCCCGCTAACCCTACTGGGTAGCTAGGGTTCGGGCGGGCGACGTCGGGCATTGGGTCGGGCATGGTTTTGCTCTACCCGTGCCCGACCTGACCCATTGCCATCCCAATGAGCCAATTAATACATGCTTTGGTTAAATTGTCAACCTTATTATCAGCTAATTATACATGTTGGCTAAATTGTCAATGACTAGCTAGTACACCTACAAAGCCTAGTTCATGTATAATAAAATAAGTATTGTTCATGAAGTTTGAGTTAACACTAATGCAATGGTAAAGAAACTGAATTAGCAGTAGGTATAAGCAGTAATTATGTTCAGATCTGTAGATAAGTTTGGTTTGTTACAATCCTTTTTCAAACACTTATTATTATGTGCCTTATGTTGACCAGATAAATATTTTTGAAGTTGTAATGTATCATATGCATTATTTATATATGCAATACTCACTCCTCTTTTTTTTTTTTCAGGTTTTCAATGTCAAGTAACAAGTACCAAATAATTAAAACTCCAATAATCATTCGGAACAACATGTTTGTCAGACCATATTTAGGCAAATCTAAGATGGGTGTGTCATTTGGATTTATTGATGATTATCAACTCTCAGTCTGGATCCTCAAAGAATCAGCTGGACAAATTAAGTGGGTCTTAAGTTACCAACATGACCTTTGGGCAGCGATCAATCAAGTAGATTCGTTTGATTTTGGTGGTCACCAGATTAATGGGCCTTGGGTCTTAGAAGAGACCATCCCAAAATACAGAACAATTGAAAACAAGGAGACTCTCTCAGACAAAGAGTGGGATTCCGACAATGATGATTTTCTTGATACTGAAGTTGATGATTTTCTAATTGATACTGAAGTTGATGATGAGGGACATAACGATTTTGCATACTTTCGTATCCTTGGATTTCATCCTTACAAGGAAGTCATTTTCTTAGAAGAAACATTACGAACATTTGCCTATCATTATAATAGCTCAAAGATTCAATACTTGGGCTACTCATGCCCTAAATATTGCTACGGAAGATACACAATACATGAGTCGTTCGTGTACACTCCCGGCATGATTGGAGAGCTTAATGGACACTATGCTGCAGGGCAGAGCTCACCTCAATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA022997