BGIOSGA023013

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Revision as of 13:26, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA023013| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA023013, complete gene.| tag = OsI_231...")
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Gene Name

BGIOSGA023013

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA023013, complete gene.

LocusTag

OsI_23177

Ensembl Transcript ID

BGIOSGA023013-TA

Ensembl Protein ID

BGIOSGA023013-PA

Length

5331

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:19859083..19864413

Sequence Coding Region

19859083..19859460,19860054..19860149,19860352..19860561,19861213..19861278,19861564..19861665
,19861801..19861995,19862204..19862304,19862437..19862524,19862621..19862971
,19863883..19864413

Genome Context

<gbrowseImage1> name=IndicaChromosome06:19859083..19864413 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:19859083..19864413 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCCTCAGGACGATGACTGGTTCTGGGGGCGCCCGACTCCCGTCGTCGTCGGCGACGGCGAGACGACGTCGAAGCCAAAGCCGCCGGTGGCGGGGAAGACGAAGAAGGTGGAGGAGCAGCACCCACGGCGACCGGGGGAGCCGGACTGCAGCTACTACGTCAAGTTCGGGAGCTGCAAGTTCGGCATCAGCTGCGTGTACAACCACCCGGATCCGAGGCCGCAGCATGGCGCCGACGACAAGAAGCCGGCCGAGCAGTTCCCGCGGCGGCCCGGCGAGCCCGACTGCAGCTACTACGTCAAGTTCGGGAGCTGCAAGTTTGGGATGAATTGCAGGTTCAACCACCCTCCCCGCATGCCAGTGCCACCACAACAAGAGTATTTCTCTGGGAATGCATGCCACTGCCACCATATTGAAGGCAAAAGTAAAGTTGAGCAAGTAAAGCTGAACGTTCTTGGGCTTCCACTTCGTCCTGGGACAGGGTTGTGCTCATACTACATGAACCGGGGAATCTGCAAATTTGGCACTAACTGCAAGTTTGACCACCCAGATCCAGGCTCAGATCATGAGAAGTGGGTCGTTTCAAGTAATGCCAATCAAGTTTCCTCTCAGGTGAACATTTACTCGGTGCTTGACCATGGAGAATCGAATGAGCATACTTTTACCTCCGAAGAAGTCCATCAGCCAGGGATTCCAAGTTTTCACCAAGGAATCAGTTACACAAGGGACCAACTTCTCCAACTTTGTCAGAATGTCGAAGTGCCCAAGGACATCTTAAAATTTTGTCAAAATATTAATGTTGAACTGAATGGTGAAGATAAAATGTCGGGATTTGGAGCAGAGAAAGATCATGTACAAACTCCATCATATAAATGGTTTGACGCGACAGACAGCCGTGACTGGCATTCACGGTCTGCACAAACTAATTGGGAACAGAAATTTTGGGACAACTTCTCTGAAGCAAAAGAACCCTATTCTTTAGGTTGGAAGCAAGAGAAATTTAACAAGCCTGACCAATCAAGCTTCCACTTTGATTCTAAAGATCAGCAGGATGACCCCATCTCAGTTCTTGTTAAGGCTGAAGTCCCTTTGTCAATCCAGAGAGGCATTATCTCTGGCAAAGATGAAGTTCTGAAAACATTGAAAAGTATACTAAACACATTTACACCAAAGATGTTCGATCTTCAGAAGGGCCAGCTAATAGAAACAAGAATCTCTAGCGCTGATATTTTGAAGGATGTTATTAATCTTATATTTGAAAAGGTTGTTGCTGAGCCAGCCTTCTGTTCGACGTATGCGCAACTTTGCACATATCTAAATCAAAACCTCACACCATTCCCTCCTGAAGACTGTGATTGTGAAGAAATTACGTTCAAACAAGCACTGTCGAACAAATGTCAAGAAATATTCGAAAGTGCTCACACCGTATGTTCTGAGATTGGCAAATTGATTGGACAAGACCGAGAGATGGAGCAACGGGATAAAGAAAGGGTAGTGAAACTTGAAACACTGGGAAATATTAATTTCATTCGAGCCCTGCTCAAGAAAAAGTTGATCACAAATAAGATAATAGATCACATTGTTCAGGCAGTGATGGATTGTTGTAAGTTTCGCTTTGAACCACTTGGAAAAGTTGATTTGCTAAATATAATATTTGAAGGCATGCTGGATTCAGATTCAGCAGGTGCTGAATCTAATATTTGCGTCAATGCTATGATTGGTGGCAATAAATCTTCCATAGCTTCAAATGATGTCGAGATGACTCGTAAGAATGTCAATAGGCAAAATGAAGAGGCAATATTACAAAAATCTTATGATGAAGTCCCAAATAACAAAATGGATCCTCAGAAAAATTATGCAGATGGAGCAATCAGTTATCTCATTGAGAAAGAGAAGCCAACTAACTTAGAATCATCTGTGAGGATCTGTCGAGGAGGATGCAGTATTTCAGAGATAATGGAGTTAGTTGTTGATGCAGGAGCTGTGGAAGGCAGTGATGAGCATTTCATGGCTACCTTATTATTTATTAAACCTGAATATAGGGAAATATTTCTTACCCTTGATACGCGTGAAGGAAGACTTGGGTGGCTGAAAAGGATGTACAAGGTGAAGGAATAA</cdnaseq>

Protein Sequence

<aaseq>MPQDDDWFWGRPTPVVVGDGETTSKPKPPVAGKTKKVEEQHPRRPGEPDCSYYVKFGSCKFGISCVYNHPDPRPQHGADDKKPAEQFPRRPGEPDCSYYVKFGSCKFGMNCRFNHPPRMPVPPQQEYFSGNACHCHHIEGKSKVEQVKLNVLGLPLRPGTGLCSYYMNRGICKFGTNCKFDHPDPGSDHEKWVVSSNANQVSSQVNIYSVLDHGESNEHTFTSEEVHQPGIPSFHQGISYTRDQLLQLCQNVEVPKDILKFCQNINVELNGEDKMSGFGAEKDHVQTPSYKWFDATDSRDWHSRSAQTNWEQKFWDNFSEAKEPYSLGWKQEKFNKPDQSSFHFDSKDQQDDPISVLVKAEVPLSIQRGIISGKDEVLKTLKSILNTFTPKMFDLQKGQLIETRISSADILKDVINLIFEKVVAEPAFCSTYAQLCTYLNQNLTPFPPEDCDCEEITFKQALSNKCQEIFESAHTVCSEIGKLIGQDREMEQRDKERVVKLETLGNINFIRALLKKKLITNKIIDHIVQAVMDCCKFRFEPLGKVDLLNIIFEGMLDSDSAGAESNICVNAMIGGNKSSIASNDVEMTRKNVNRQNEEAILQKSYDEVPNNKMDPQKNYADGAISYLIEKEKPTNLESSVRICRGGCSISEIMELVVDAGAVEGSDEHFMATLLFIKPEYREIFLTLDTREGRLGWLKRMYKVKE</aaseq>

Gene Sequence

<dnaseqindica>1..378#972..1067#1270..1479#2131..2196#2482..2583#2719..2913#3122..3222#3355..3442#3539..3889#4801..5331#ATGCCTCAGGACGATGACTGGTTCTGGGGGCGCCCGACTCCCGTCGTCGTCGGCGACGGCGAGACGACGTCGAAGCCAAAGCCGCCGGTGGCGGGGAAGACGAAGAAGGTGGAGGAGCAGCACCCACGGCGACCGGGGGAGCCGGACTGCAGCTACTACGTCAAGTTCGGGAGCTGCAAGTTCGGCATCAGCTGCGTGTACAACCACCCGGATCCGAGGCCGCAGCATGGCGCCGACGACAAGAAGCCGGCCGAGCAGTTCCCGCGGCGGCCCGGCGAGCCCGACTGCAGCTACTACGTCAAGTTCGGGAGCTGCAAGTTTGGGATGAATTGCAGGTTCAACCACCCTCCCCGCATGCCAGTGCCACCACAACAAGAGGTAATAATGTCAAACACATGCGTATTATATTGGTAAAAACCTTTGGAAGAAAAATACTTGTTTCTTTCCGTCGTACAAAATTATTCTGAAGCAAAATCAAGATTACTTCTCTCCTAAAAAAATCAAGATTATTTTCTGGCGTCAGTGAGCAGCCAAGACCCTAGTATTTTTTCTCAGCAACAAACAAACGTAGTTACAGTGAACGTTTTCCCCCCTAATAACTATGTGGAATATGCTATAGCTAGCTCGGTAGACTCTTGTTTTATTTCGTTATCTCTAGAAGTCGACCAGGCAGTTAGCTTTGGACTAGTTGGGCTTGGGCCATGACGAACAATGGACTAGTAAAGCTTATGGTCCAGGAAGAGAGGAGAAGAAAAAACTAGAAAGGGGAAGAAGAGAAGATATGAGAGTGGTTTGAACTTGAATCACAAATAGTGACCCCAAAAGAATTTTTTGTATAAAATCCTAATTTTCAAGATTTTACACATAACCCATTCATTAATTAATTACTTCCGCAAATCAATTTATGCATGCATCACATTAATACATTGTTTGTTAGGAGTATTCTTTATCTCACAGAAAGTGTTTTTTAGTATTTCTCTGGGAATGCATGCCACTGCCACCATATTGAAGGCAAAAGTAAAGTTGAGCAAGTAAAGCTGAACGTTCTTGGGCTTCCACTTCGTCCTGTAAGTCTTTCTAATTCTTTTCTTGTTGGGTTTATTTCTTTCTTCTGCACGCAACTATGTTAGCTAGGCCAATCATTTGTAACAAAGCTTTCTTTTTGCCTTTTCCATTGATCACAATATATTAGGGCATTGCATACTACTGTTTAATTCAAAAATTACTATTTTGTTGGTGAAAACATGATACATGCATGTAATCCTTCAGGGGACAGGGTTGTGCTCATACTACATGAACCGGGGAATCTGCAAATTTGGCACTAACTGCAAGTTTGACCACCCAGATCCAGGCTCAGATCATGAGAAGTGGGTCGTTTCAAGTAATGCCAATCAAGTTTCCTCTCAGGTGAACATTTACTCGGTGCTTGACCATGGAGAATCGAATGAGCATACTTTTACCTCCGAAGAAGTCCATCAGGTATTATCCAGTTGAAATATTGATGGCTGTCTTTGTAGAAAAATATAGTCACACTTATAGTACCACTTAGTTTCATTATATCTAACATTGAACATATTAGTTCCATTATATCTAACATTGAACATATTTTGGTAGTTTCTTTGTTGTGTGTTAAAAATATTACTTTTTCTTATCTATAAATTAGGTAAAAATTAAATAAGTTTGACCTAAAAAAATGTCAAAATGACTTATAATATGGATCTAAGGTAATACTCGCTAATTGTTCGGATTTGATGCCAATATTTTCCAATTCTACACATTTGATGTAACACTAACATACTAAAACATTGCTGTTGCCAATACTTGCCTGTGTTGATTTGATAGGGCACTACACCAAAATTGCCATATTTTTTCAGCTTGTTGTCAATCCATGCAAATTGAGCAGTCTTGAAGTTTGATATGAGAATTGTCTTGGATTAATTGAGAAATGTTGAGTGGTAAGCATTAGTCAATGCCTAGCAAACATTTGAAGTGTGTAACAAGCGTAAACATGAATCGGATTGTGTATAAGGTAGACAATAATGATAATGTGTGCGGCAAGAGATATTTTCCCTCAAACAAATATTATTATAGTATCTTTGCTATGCTTACTTTTGCATTAATCTGCTGCAGCCAGGGATTCCAAGTTTTCACCAAGGAATCAGTTACACAAGGGACCAACTTCTCCAACTTTGTCAGGTATAAGTTCTGGGCGACTAATATGTTTCACTCATTTTCTCTCTTAAAATTTAATTGCTGTATTGTGCAAATTATCGTAAGTAAGACGGATAACATTCTTCAAGCCATTACAAAGTAGCATAATTAGTTGTTGTGAAAATTCCATCATATTTTTTTTATATTTATCAATAGATGACTGTTATCCCCTATGTATTGCTGTTTTTCGCTGCAGAAATGTTCAAGTTCTTTACACAAACTTGTATGGCCTTCTCACATATTATTAATGTATGAATTATGTCTATGCAGAATGTCGAAGTGCCCAAGGACATCTTAAAATTTTGTCAAAATATTAATGTTGAACTGAATGGTGAAGATAAAATGTCGGGATTTGGAGCAGAGAAAGATCATGTGAGCATCCTTCCCTTCTCATATGTCATCATGGCCGAAATCGTTTGTGCTGCTCTGATTAATGTTCCTCAAAGATGCAAAGTCTTGTATTTCATAGTAAGTACAATGTTGCGTTTTTTTGGGTATATCTGTTAGGTACAAACTCCATCATATAAATGGTTTGACGCGACAGACAGCCGTGACTGGCATTCACGGTCTGCACAAACTAATTGGGAACAGAAATTTTGGGACAACTTCTCTGAAGCAAAAGAACCCTATTCTTTAGGTTGGAAGCAAGAGAAATTTAACAAGCCTGACCAATCAAGCTTCCACTTTGATTCTAAAGATCAGGTATCTTAAAAATACAAGTGTGTTAGTAAATTGTTATCAGATCTGAATTGTACAATATGGTCTTCTCACCTTGTCTCTCAATTAGTGGTTAAAATTTATAAAGTGTACACCCTGCAAAAGCACTTTGATTTAATTTTGTAGTATGGTAATAATTACCACCATTACTTCGGTGATGCCTATTTTAACATTTGGATTTTACTACAAACAGCAGGATGACCCCATCTCAGTTCTTGTTAAGGCTGAAGTCCCTTTGTCAATCCAGAGAGGCATTATCTCTGGCAAAGATGAAGTTCTGAAAACATTGAAAAGGTATTATTTCATTTAGGAATTCTGTTCTTGTTTCATTAGTAAAGCATTTTCCCATCAATTGCATATTCAAAAAGTGTATTTTGTTTATCTGTTTTTGTTTGCATATTTTTATTTGTTGTTTTTGTTAAACAGTATACTAAACACATTTACACCAAAGATGTTCGATCTTCAGAAGGGCCAGCTAATAGAAACAAGAATCTCTAGCGCTGATATTTTGAAGGTTTGGTTTAATAAAAAGCAAAGTTATTTTTATTCAGGCAGCCTTCTTCTATGTTTTGGACTGATGTTGAGTTGTTTCTACTATGCTTTTACTCAGGATGTTATTAATCTTATATTTGAAAAGGTTGTTGCTGAGCCAGCCTTCTGTTCGACGTATGCGCAACTTTGCACATATCTAAATCAAAACCTCACACCATTCCCTCCTGAAGACTGTGATTGTGAAGAAATTACGTTCAAACAAGCACTGTCGAACAAATGTCAAGAAATATTCGAAAGTGCTCACACCGTATGTTCTGAGATTGGCAAATTGATTGGACAAGACCGAGAGATGGAGCAACGGGATAAAGAAAGGGTAGTGAAACTTGAAACACTGGGAAATATTAATTTCATTCGAGCCCTGCTCAAGAAAAAGTTGATCACAAATAAGATAATAGATCACATTGTTCAGGTATTCATATGCCGCCCTCCATTGCTAGAACGTTGCCTGTTAATGATCCTTTTTTAGGTACTGAAAGTTTTATTGAACTCAGCCAAACAATTTGAGGACACTCCGGGCCTCTGCACCACTACACTGCACACAGCGAACACACCCTCCAACGCAAAGAAAAACAGAACAAACCCAAATATCTGTTAATGATCTGGCAATTTATGCAGTTAATTAATACTATTCTTAGCTGCTTTTAAGATGATATGGTGACCATGAAGTACATAATCTTTCAGAAAAATATTTTAATCCTATTTATATATCCTTTAGAGCTATTTACCTAAGAAATGTCCACAGGCCACAGATATATAATCCATTTGTAACGTCCAGCTATCAAAATTAAGCATATTAATTAAAGATGTTATGAAAAGATTTGCCATATATTATTTCAATATGGTTGATCAGATTTCGTGGTACTTGGTGCCTTTTAAGTTATAAACCAGCAACATCGAATACATGAAAACCATGATTTGTGCAGAGTTTTACCTTGACAAGCACTATCATAATCTCATAAAGTTTTCCTCGCAAAAAAAATAATCTCATAAAGTTATTTGATTCCATCAACTTGTTGTAATATATATGTCTTTCTTACATGTCAAATAGTTAGTTTTTAAGTACTACAGTTATCTTTTTTATCAAACTTATGTATGATATCTTCTTGGAATTATATATGTATATATATTTTTTCAACTTCAGTATTTATGAAATAATGTTTTTTGAAATTCAATGTCATGTTTGTGTTTGGTGAATTGATTTAATATATTGCACTCCGATCAGCTATTAGATGGGACTAGGAATAGCATTTTTTTTCATTTACACAGCTTGAAGTATATATATATTTACTCAACCATGTTATCCTTTCAATTGTTTTGCAGGCAGTGATGGATTGTTGTAAGTTTCGCTTTGAACCACTTGGAAAAGTTGATTTGCTAAATATAATATTTGAAGGCATGCTGGATTCAGATTCAGCAGGTGCTGAATCTAATATTTGCGTCAATGCTATGATTGGTGGCAATAAATCTTCCATAGCTTCAAATGATGTCGAGATGACTCGTAAGAATGTCAATAGGCAAAATGAAGAGGCAATATTACAAAAATCTTATGATGAAGTCCCAAATAACAAAATGGATCCTCAGAAAAATTATGCAGATGGAGCAATCAGTTATCTCATTGAGAAAGAGAAGCCAACTAACTTAGAATCATCTGTGAGGATCTGTCGAGGAGGATGCAGTATTTCAGAGATAATGGAGTTAGTTGTTGATGCAGGAGCTGTGGAAGGCAGTGATGAGCATTTCATGGCTACCTTATTATTTATTAAACCTGAATATAGGGAAATATTTCTTACCCTTGATACGCGTGAAGGAAGACTTGGGTGGCTGAAAAGGATGTACAAGGTGAAGGAATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA023013