Os11g0616500

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Revision as of 09:16, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0616500| Description = TRAF-like domain containing protein| Version = NM_001189723.1 GI:297728576 GeneID:9271904| Length = 1029 bp| Defini...")
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Gene Name

Os11g0616500

Description

TRAF-like domain containing protein

Version

NM_001189723.1 GI:297728576 GeneID:9271904

Length

1029 bp

Definition

Oryza sativa Japonica Group Os11g0616500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:25835851..25836879

Sequence Coding Region

25835851..25836879

Expression

GEO Profiles:Os11g0616500

Genome Context

<gbrowseImage1> name=NC_008404:25835851..25836879 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:25835851..25836879 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgatgacccgtcgccaggatgcctactaccgctacccaaccacgtcgaccatcgtcgcgtcggcgccaatgcccaccggccaccacgtcctcaggatcgacggctactccctcaccaaggccaagttcgccgccggcgaagaatgcgacgagtcgtgcagcttcgtcgtcggcggccacgcctggcgcatcaggtactaccccaacggcgccgtcgtctccggctccggtggcttcgtatccctcatgctctcccttgatcatcagcccggcgccgcattgccggccgccgtcgtcaaggcgcggttcgcgttcagcttgctcgacatggacggcgagccggtgccgtcgcgcacctacgcgagcgacggcgtggtcagcttcagcgctaattcgtcgagcacgttcggggcggagaggttcatcggccacggcgagctcgaggcgtcggggcacctcaccggcgaccgcctcgccttccggtgcgatgtcaccgtcgtgaagcgcgacgggcctccgacgatgtcgaccctctgcccggtggagcacgacatgttcagatgcctgctcgacaccggggacgacgcggacgtcgcgttcagggccgccggcggcgagacgatcgccgcgcataggcgggtgctcgagcgacgggcaccggagctggccaagctctgtcgtcgtcgcggcggcgcctcctgcttcatgggactcgtcgggaggcacatcgacgtcggcgacatggacgccgctgcgttcaaggctctgcttcacttcgtgtacaccgacacgctgccggagacgatggccccgcgagaggtgccggccatggcgccgcagctgatcgcggcagcgcgtaaatacggcttggactgggagaggttgaggctcctctgtgaggacaaggcgtggggatggcgcgtcgacgacacgagcatggacacgacggcggcggctgctccggctaccggcgatgatccgaagcgtagccagcgacgtcttccatggtttataaggaaatgtttttaa</cdnaseq>

Protein Sequence

<aaseq>MMTRRQDAYYRYPTTSTIVASAPMPTGHHVLRIDGYSLTKAKFA AGEECDESCSFVVGGHAWRIRYYPNGAVVSGSGGFVSLMLSLDHQPGAALPAAVVKAR FAFSLLDMDGEPVPSRTYASDGVVSFSANSSSTFGAERFIGHGELEASGHLTGDRLAF RCDVTVVKRDGPPTMSTLCPVEHDMFRCLLDTGDDADVAFRAAGGETIAAHRRVLERR APELAKLCRRRGGASCFMGLVGRHIDVGDMDAAAFKALLHFVYTDTLPETMAPREVPA MAPQLIAAARKYGLDWERLRLLCEDKAWGWRVDDTSMDTTAAAAPATGDDPKRSQRRL PWFIRKCF</aaseq>

Gene Sequence

<dnaseqindica>1..1029#atgatgacccgtcgccaggatgcctactaccgctacccaaccacgtcgaccatcgtcgcgtcggcgccaatgcccaccggccaccacgtcctcaggatcgacggctactccctcaccaaggccaagttcgccgccggcgaagaatgcgacgagtcgtgcagcttcgtcgtcggcggccacgcctggcgcatcaggtactaccccaacggcgccgtcgtctccggctccggtggcttcgtatccctcatgctctcccttgatcatcagcccggcgccgcattgccggccgccgtcgtcaaggcgcggttcgcgttcagcttgctcgacatggacggcgagccggtgccgtcgcgcacctacgcgagcgacggcgtggtcagcttcagcgctaattcgtcgagcacgttcggggcggagaggttcatcggccacggcgagctcgaggcgtcggggcacctcaccggcgaccgcctcgccttccggtgcgatgtcaccgtcgtgaagcgcgacgggcctccgacgatgtcgaccctctgcccggtggagcacgacatgttcagatgcctgctcgacaccggggacgacgcggacgtcgcgttcagggccgccggcggcgagacgatcgccgcgcataggcgggtgctcgagcgacgggcaccggagctggccaagctctgtcgtcgtcgcggcggcgcctcctgcttcatgggactcgtcgggaggcacatcgacgtcggcgacatggacgccgctgcgttcaaggctctgcttcacttcgtgtacaccgacacgctgccggagacgatggccccgcgagaggtgccggccatggcgccgcagctgatcgcggcagcgcgtaaatacggcttggactgggagaggttgaggctcctctgtgaggacaaggcgtggggatggcgcgtcgacgacacgagcatggacacgacggcggcggctgctccggctaccggcgatgatccgaagcgtagccagcgacgtcttccatggtttataaggaaatgtttttaa</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0616500, RefSeq:Os11g0616500