BGIOSGA023042

From RiceWiki
Revision as of 13:26, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA023042| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA023042, complete gene.| tag = OsI_232...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA023042

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA023042, complete gene.

LocusTag

OsI_23250

Ensembl Transcript ID

BGIOSGA023042-TA

Ensembl Protein ID

BGIOSGA023042-PA

Length

5211

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:20776657..20781867

Sequence Coding Region

20776657..20776989,20777122..20777307,20777738..20777923,20779352..20779438,20779557..20779598
,20779676..20779765,20779911..20780015,20780310..20780348,20780427..20780531
,20780976..20781044,20781100..20781249,20781688..20781867

Genome Context

<gbrowseImage1> name=IndicaChromosome06:20776657..20781867 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:20776657..20781867 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCACCCGATCAAACTCTGTGCCCGCTCGCCCCGGCCGTCGTCCAAGAAGCGGAAGCGCCCCGCCGCCGCCGCCGCTACTCCGCCGGAATCTGAACCGGAGCCGGTACACAACACCGCCGCCTGCAATTCGGAGGGAGAGAACAACGCGACGGGGAAGAGGAGGGAGCACAACAACAAGAAGATGAAGGAGAAGAAGAGCAAGAGGAAGAAGAAGCAGGGGGAGGGGAAGAAGGGATCAGGGATTCTGACGGACAAGCTCTTCTCGGATCTCCCCATCTCCGACCTCACCGCCAATGCCATCAGAGACATGAACTACACCCACCTCACCGAGATTCAGGCTAGATCGATACCGCCTCTGATGTTGGGAAGCGATGTGATGGCGTCAGCCAAGACCGGCTCAGGGAAGACGCTTGCGTTCCTCATCCCGGCGATCGAGCTGCTCTGCAGGCTGCGCTTCTCGCCGAGGAACGGGACCGGAGTTATCGTGCTTTGCCCAACAAGGGAGCTCGCTATCCAGACACACAATGTTGCCAAGGAATTAATGAGGTATCATTCACAAACTCTTGGATATGTAATTGGTGGTATTGACTTGAGGGGCGAGGCTGAGCAGCTCGCGAAAGGGATCAATGTATTAGTTGCAACGCCAGGAAGGCTTCTGGACCATATGCAAAAAACCAAAAGTTTCAAATATGAATGCCTAAAGTGCCTTATAATTGATGAAGCTGATCGTATACTTGAGCAAAATTTTGAGGAACAAATGAAACAAATATTTAAACTCCTTCCTCGGCAGGGTAGGCAGACTGTTCTTTTTTCTGCTACACAGACTGAAAAGGTTGAAGATTTTGCGAAGTTAACATTTGGGAGCAAAGAAGAAAGGCAGCGAACACTTGTTTATGTTGGAGTTGATGATCATGAATCAAAGGCTACTGTTGAAGGCTTGAAGCAGGGCTATTGTGTCATTCCTAGTGAGAGAAGGTTTCTGGTTCTGTATGCTTTCCTAAAAAAGGCACTTTCTGAGAAGACGAAGGACTATATTGTGCAATATGATCCTCCAGATGAAACAAAGGATTACATTCACAGAGTTGGTCGTACTGCCCGTGGCGATAATGGCAAAGGAAGTGCAATACTGTTCTTACTACCGAAAGAATTACAGTTGCTCATTCACCTGAAAGCAGCTAATATTTCTGTATCTGAATATGTGTTCAGACAAGAGCTTGTGCCAAAATTGCAACCTTACCTTCATTATGACTCAAGTTTTGAGCAGGAGAAAATTGTTGGTGGGAATTACATCCTAAACAGATCGGCGAAAGAAGCCTACAAATCCTATCTTTTGGCATACAAATCACACTCTATGAAAGACATTTTTGCTATCCATCAACTTGATTTGACGAGCGTAGCGGCTTCGTTCTGTTTTAGTGAGCCTCCAAAGGTGAATCTGGACCTGGAGAGCAGTGCGTCAAAACATCGAAAGAAGAGGAATGTAAACACTGGCAGGAGGCATGGTATCGGCCCTTCAAACCCATACGGAAGGAAAGGCAGTGATGATCGTAGGCAGTTTGCAAGATTCTAG</cdnaseq>

Protein Sequence

<aaseq>MHPIKLCARSPRPSSKKRKRPAAAAATPPESEPEPVHNTAACNSEGENNATGKRREHNNKKMKEKKSKRKKKQGEGKKGSGILTDKLFSDLPISDLTANAIRDMNYTHLTEIQARSIPPLMLGSDVMASAKTGSGKTLAFLIPAIELLCRLRFSPRNGTGVIVLCPTRELAIQTHNVAKELMRYHSQTLGYVIGGIDLRGEAEQLAKGINVLVATPGRLLDHMQKTKSFKYECLKCLIIDEADRILEQNFEEQMKQIFKLLPRQGRQTVLFSATQTEKVEDFAKLTFGSKEERQRTLVYVGVDDHESKATVEGLKQGYCVIPSERRFLVLYAFLKKALSEKTKDYIVQYDPPDETKDYIHRVGRTARGDNGKGSAILFLLPKELQLLIHLKAANISVSEYVFRQELVPKLQPYLHYDSSFEQEKIVGGNYILNRSAKEAYKSYLLAYKSHSMKDIFAIHQLDLTSVAASFCFSEPPKVNLDLESSASKHRKKRNVNTGRRHGIGPSNPYGRKGSDDRRQFARF</aaseq>

Gene Sequence

<dnaseqindica>1..333#466..651#1082..1267#2696..2782#2901..2942#3020..3109#3255..3359#3654..3692#3771..3875#4320..4388#4444..4593#5032..5211#ATGCACCCGATCAAACTCTGTGCCCGCTCGCCCCGGCCGTCGTCCAAGAAGCGGAAGCGCCCCGCCGCCGCCGCCGCTACTCCGCCGGAATCTGAACCGGAGCCGGTACACAACACCGCCGCCTGCAATTCGGAGGGAGAGAACAACGCGACGGGGAAGAGGAGGGAGCACAACAACAAGAAGATGAAGGAGAAGAAGAGCAAGAGGAAGAAGAAGCAGGGGGAGGGGAAGAAGGGATCAGGGATTCTGACGGACAAGCTCTTCTCGGATCTCCCCATCTCCGACCTCACCGCCAATGCCATCAGAGACATGAACTACACCCACCTCACCGAGGTCACCATCCATCGTCTAAAAATTCCACAGTTATCCATCTTCTTTTTGTTGAAAAATTGTTGGATTTCAGTGCTCGACAGATATGTAACGAGGTGTCATTTTTTTTTTTCATGATTGATTGATTGATTGCAGATTCAGGCTAGATCGATACCGCCTCTGATGTTGGGAAGCGATGTGATGGCGTCAGCCAAGACCGGCTCAGGGAAGACGCTTGCGTTCCTCATCCCGGCGATCGAGCTGCTCTGCAGGCTGCGCTTCTCGCCGAGGAACGGGACCGGAGTTATCGTGCTTTGCCCAACAAGGGAGCTCGCTATCCAGGTGCATTTTCATACGCATTGCTAGTATTTGTTTGGCGTTTGTTGGTACCTGACAGACAAAATTTTTCATGCATGATGCAGCAGTATTTCTTTTGGATCCATTTTATACTACATGTTTTATGCCTGTTCAACAATTGAACTTGTTGTGACTTGTGAGTGAAAATAAAAAATCAACATTGGATGTACATGTAAAATGAGATAAGATTGTACTAGCTTTGTTAAGGCAATTTATGTTCATGTCAAGGTATTTTTAAGAATGCACAGAAAGCTGCTTTTCACATTGCTGTTGCCAATTATTAGCAAATTCTTAAACTTTAAAAGGCAGCATTTTGTAGTGTATCTAAATTTTGGTTCAGATTATGTATTGTTAGTGGCTCATCTTTGTATTTCAGTATAATTAATCATGCGTCTCATTGATTCAATTGCTCTAGACACACAATGTTGCCAAGGAATTAATGAGGTATCATTCACAAACTCTTGGATATGTAATTGGTGGTATTGACTTGAGGGGCGAGGCTGAGCAGCTCGCGAAAGGGATCAATGTATTAGTTGCAACGCCAGGAAGGCTTCTGGACCATATGCAAAAAACCAAAAGTTTCAAATATGAATGCCTAAAGGTAAAGAAACACTTTCCTTTACAATGTGGAACTAAACCTGTCTGTTGAAATAGTTTGCAGATTAAAATTTCCTTATTGCTTAAAAAGTACGAGCTGCATTTTCATGTTTCTCTCGCAATTTGCATAATCAATCACCTGATTATTTCATATATAAATTGTGTGCCTGCATCTACCCTTTATTCTGTCCAGTGTGTTTGTTAGTACTGAATTAGAGTATAAATCAAATTTCAAAATAGATTTTGCTGAGTATATGCAAAGCTGTATTTTTTAACATTAATTCGTACTGTCTCCAAATTGCAACTTTTAACAATAATTTCTATTGTATTATGTTTGTAAAGACAGATAGAATTGTACTTTTGCGGAAGTTGTTTCATTACAAGTCCATACGTATAATTTTCATGTGCCCGATTAAATATTTAAAAAGATACAGATGGTAAAGGTTTTTGATGTTTGACTAGAGGCATGTCTAAAACAACTTTCTATAGGTTCCAACATTTTGACAATTTTACCCATTTGAAAAACTTATTGCGAAAATGGATCACTAACTCAGCGCCATTGGTGTTAACCTTGGAGATGGCGTTTGCCAGGTCATTGGAGCTCAACATCAATAGCATTGGCACTGAGCTCTCTACTAACTAAAAGGAAGCACATGCCTTATTTGATATAATGGTGCGGCTAGTGCAGTGGTGGAGTTTCTTGCTTTTACCCAAGAGGTCATGGGTTCAAGTCCTCATTCCCTTAATTTTTTGGATGGAGACTTGAACCCATGACCTCTTGGGTAAGAGAATAAGACACCACCACTATACCAAGCACACCTTGTTGCTTTTACCCAAGAGGTCATGGGTTCAAGTCCTCATTCTCTTAATTTTTTGGATGGAGACTTGAACCCATGACCTCTTGGATAAGAGAATAAGACACCACCACTATACCAAGCACATCTTGCAGTCAAAGAAGACATTCACCCCTTTTAGCTAGTACAGATCTCAGTGCCAATGCGCATATATTGAGCTTCGTTGATCTGGCAAACACTCACCTCAGATAAGAGGTTAACACCATCATTTGTGGCGCTAAGGCATTATAACTCAGAGCCATCAGGTCTGGCCCTGAGGTGGTTGTATATTTTTGCAATAAAGTTTTTGGCACGTTCTCAAAAGGGTCAAATTGGCAAAATTTCGGGTGATAATTTTCTACTGTCAAGTCCTTGTTAGCTCTGTTGCAGATTTCTTCTTGTTTTGTTATTAGTTGCACCAAGTTTATGGGTGTTACATGGAGTCAAATCTAGTTGATACTTTTGCCGTTGCCATATGGACAGGTAGTTTTGGCTGAAGCTACAGAATGCCATGAAATTGCTGTCCAGTATAATGAATGTCGTGACTGACCCCCTCGCCCTCTTCACTGTCTTTGACATAACTCATCTTAATGTTGTAGTGCCTTATAATTGATGAAGCTGATCGTATACTTGAGCAAAATTTTGAGGAACAAATGAAACAAATATTTAAACTCCTTCCTCGGCAGGTATATGACCATCTATCTGCCCGTCTGGCAATTTCATTTCATATGCATCATGCAGCCTTTAACTTTTTACTGACATGATACTGTATTTATCCTGCAATTTATTATGCATCATTTGCAGGGTAGGCAGACTGTTCTTTTTTCTGCTACACAGACTGAAAAGGTTAGTGGATCTGTTATTCAGCTCATTCAAGCTGTTTCCTTCATTGGTGTCTTTGCTTATGTGCTGGCATTCCGTAGGTTGAAGATTTTGCGAAGTTAACATTTGGGAGCAAAGAAGAAAGGCAGCGAACACTTGTTTATGTTGGAGTTGATGATCATGAATCAAAGGTATTGAACTTTTGAACTGTTTAACTGTCCTTTTAAGTTTTTTTTATGTTGGAATTTGACTGAATTACATGATGATCATGAACACAAGATTAGTGGAACTTTTTTTTGTTCTTTGGTGTGAGAAATAATTGCGATGCTCTTTCAGGCTACTGTTGAAGGCTTGAAGCAGGGCTATTGTGTCATTCCTAGTGAGAGAAGGTTTCTGGTTCTGTATGCTTTCCTAAAAAAGGCACTTTCTGAGAAGACGAAGGTCATGGTGTTCTTTTCATCATGTAATTCAGTCAAATTCCATGCACAACTTCTGAATTTCATCCAGATAGAGTGTTATGATATCCATGGGCAACTAAAGCAGCATCAACGAACTAGTACATTTTTTAAGTTTCACAAGGCAGAACATGGCATCTTATTATGCACTAATGTGGCAGCACGAGGACTTGATATTCCTGATGTGGTGAGGTTTTTGACTTGTGGTTTTTAGACCATTTAATTAACCACTCCTATTTTTTGTCCACTTACTAACCTAAGAGTTTGTTGCCTTGTTTAGGACTATATTGTGCAATATGATCCTCCAGATGAAACAAAGGTTAGGGATTTTAAATGGTGCCAAAGAAAATTTCTATTCCTCACTTTTACTAACTTGACATTGGAATTTAATTTGCAGGATTACATTCACAGAGTTGGTCGTACTGCCCGTGGCGATAATGGCAAAGGAAGTGCAATACTGTTCTTACTACCGAAAGAATTACAGTTGCTCATTCACCTGAAAGTATGAAATAATTCATCTGACAATTGTTTTCTCACAAAATACTTAAAATATGAACCTAGTTGTATAATTTCATACCATAAACATTTTTATGATTTGACTTCTCCAACCCATAATATATTTGGACAGAGGGAATAACGGGCTTGTTTGGTTTAGTACCCTATCAATATATTGTTAGTGTCAAACTCTAAGCAAGTTTTGGCACTACCAATATTTCGGTAGGGTAGAATTGTAAATGAGTGTATTTGGATTTATGCCAATTGAGAGCCAAATTTTAAATTGTGGTGAAGAATATTCTAGAATTATACCACATTGAGTATAGGCATTACCAAACATTTGGCTTCAAACCAAATCATCACATTTACTATTTAAAGTACCAAAAAATTGGTATGGCAACATTTTGGTATCAAACCAAAACGCCCCAACATATTTCATGTTTTCCTGCAGGCAGCTAATATTTCTGTATCTGAATATGTGTTCAGACAAGAGCTTGTGCCAAAATTGCAACCTTACCTTGTGAGTGTCTCTTTACATAACTACAATGACTTAATCCCATTATTTCAATATGTAGCATTATGACTCAAGTTTTGAGCAGGAGAAAATTGTTGGTGGGAATTACATCCTAAACAGATCGGCGAAAGAAGCCTACAAATCCTATCTTTTGGCATACAAATCACACTCTATGAAAGACATTTTTGCTATCCATCAACTTGATTTGACGGTAAAATTTTACAGTGTTCTTTCTCAGGGTTGTCTTTGGTTTGTTCGCATTACTTTTCCTCTGCATTTTGTTTTCATTGCACGTAAGAATTCACACTAAATGTTACTCAGGTTTGTTGGGGCATATTTCTGTTCTCTTTCCTTTAGTTCATTTTTAAATTATTCTTTCTCTTATGAAATTTAATCTTAGTACTCAAGTAGAAGCACAGTTGTTATTTTCTTAATTTTACTGTTAGATTAGCTTGCCCCTTGAATGTTAGCATGCTAGCTGAGGATGAAAAGTCTAATTGTCAGTTGGTGTAAGATAAATGCTAATGCTTCTTAAACTCTTTCTTCAACGCCAATGAAAATGGCGTGTGTTCATTCGCATACCGAATTAGAGGGTTTGACACCACAGAAAATTGAACTAGCTTGTGTGTTATTCCTCGCTGTCCTGCAGAGCGTAGCGGCTTCGTTCTGTTTTAGTGAGCCTCCAAAGGTGAATCTGGACCTGGAGAGCAGTGCGTCAAAACATCGAAAGAAGAGGAATGTAAACACTGGCAGGAGGCATGGTATCGGCCCTTCAAACCCATACGGAAGGAAAGGCAGTGATGATCGTAGGCAGTTTGCAAGATTCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA023042

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA023042&oldid=45567"