BGIOSGA023063

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Revision as of 13:27, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA023063| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA023063, complete gene.| tag = OsI_232...")
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Gene Name

BGIOSGA023063

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA023063, complete gene.

LocusTag

OsI_23293

Ensembl Transcript ID

BGIOSGA023063-TA

Ensembl Protein ID

BGIOSGA023063-PA

Length

5009

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:21251016..21256024

Sequence Coding Region

21251016..21251324,21252093..21252351,21253044..21253407,21253635..21253853,21254889..21255021
,21255347..21255598,21255728..21256024

Genome Context

<gbrowseImage1> name=IndicaChromosome06:21251016..21256024 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:21251016..21256024 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCTCCTTCTCCGTGCATGCGCAGCCGTGGAGCAGCAGCTGCCAGCCCGCCGCTGCGGCGCCGTCGCAGAGACAATGCTCGACTACTCCCCCATGGAGGAGGCCGTGGCGGCAGCCACGGACACGGAGCCCCGGCACTTTGCGATGCCGGCAAGCGCAGCAGCAGCTGCTGCTTTCTACAGGCGTAATACAGCAGGACGCTGTTGATGATCGGTTAAACAAAAACCCTTGCAACTTCCACCCGTCTATATGGGGTGATTTCTTCCTTTACCATTCCAGCACTACTGCAGCTTCCTACCAACAACAGGAATGGATCGTACAACTTGAGAGACTGAAGGAAGAAGTGGGAAATATGATAACAAGTTCAGTTACTTCTAGCCTGCTGGAGAGGCTGCATCTCATTGATGCATTGGAACGCCTTTGTGTGAACCACCTTTTTGAAGAGGAGATCAATATTTTGCTAATGCAAATTAGCAGCTCAAATAACGTCAACGATTGTGACGATGTTCATACAGTAGCTATGTGGTTTTATCTACTTCGTAAACATGGATACAAGGTTTCACAAGATGTGTTTGTGAAATTCAAAGATGAAGAGGGAAATTTCATAGCAAAAAATCCAATGGACCTACTTGCCCTTTACAATGCTGCGCATTACAGGGTCCATGGAGAGAAAATACTTGATGATGCTATATTATTCACGAAACGATGCTTGCATTCAATGTTTCCCTCTCTAGAAGGATCATTAGCACGTGAGGTAAAATGTGCACTTGAGATACCCCTACCCAGAAGGGTTGGAATTTATGAGGCAAACTATTACATATCTACCTATGAGAAAGAGGGTAAAGTGCATGATATGATAGTACAACTTGCAAAGTTGAACTTTAATCTTATGCAACTCCAATACCAAGAAGAGTTGGACATCATTACAAGGTGGTGGAAGGATCTACAAATTCAATCAAAGCTCCCATTTGCTAGAGACAGAATTGTGGAGTGCTACTTGTGGATGTTAGGAGTATACTATGAACCAAATTGTTCACGAGGTCGAATAATATTGACCAAGGTTATTTCTATTGCAACAATCTTTGACGATACGTTCGATTCTTATGGAACAATAGAGGAGTGTGAATTGTTTACCAAGTGTCTAGAAAGTTGGGAGCTGGTGGCTGATGAACTACCGGACTGCATGAAACATGTCCTGGAAAAGGTTTTTCAGAGCTACCAGATAATCGAGCAAGAGCTGTCAGAAGATGAGAAATACCGCATGCCCTACCTCAGAAGCTTTACAGAAGATCTGGTTCGAAATTACAACAGGGAGGTGAAAATGCGCGAGGAAAGTTATGTCCCAAAATCTGTAGAAGAGCACCTACAGATTTCATCAAGGACTGGGGCCTGTCATCTTCTTGCTTGCGCTTCACTCGTTGGAATGGATGTTACGGCGACCAAGGAATCTTTTGATTGGGTTTCAACTATGCCTAAGATGGTGCTGGCACTCTGCACAATTCTCAGACTAGTTGATGATCTCAAAACATATGAGAGAGAGCAGCTGACGCCTCATGTCGCTTCGTCAATCGACAGCTACATGAAGCAGCACGATGTCTCGATCGAAATGGCACGTTTCAAGATCGAAGAGCTGAAAGAGGAACACTGGAAAGATTTCAACGATGAGTGGCTGGACCCTGACAGTGCTCAGCCGAGGAAGCTGCTGGAGGCGATATTCAACCTGACGAGGACGATGGAGTTCATCTACAACCAAGCCGACAACTTTACGTACTGTCACAACCTCAAGGATACCATTAGCTCGCTGCTTGTGGAAGCGTTTCCTGTTAACTAG</cdnaseq>

Protein Sequence

<aaseq>MASFSVHAQPWSSSCQPAAAAPSQRQCSTTPPWRRPWRQPRTRSPGTLRCRQAQQQLLLSTGVIQQDAVDDRLNKNPCNFHPSIWGDFFLYHSSTTAASYQQQEWIVQLERLKEEVGNMITSSVTSSLLERLHLIDALERLCVNHLFEEEINILLMQISSSNNVNDCDDVHTVAMWFYLLRKHGYKVSQDVFVKFKDEEGNFIAKNPMDLLALYNAAHYRVHGEKILDDAILFTKRCLHSMFPSLEGSLAREVKCALEIPLPRRVGIYEANYYISTYEKEGKVHDMIVQLAKLNFNLMQLQYQEELDIITRWWKDLQIQSKLPFARDRIVECYLWMLGVYYEPNCSRGRIILTKVISIATIFDDTFDSYGTIEECELFTKCLESWELVADELPDCMKHVLEKVFQSYQIIEQELSEDEKYRMPYLRSFTEDLVRNYNREVKMREESYVPKSVEEHLQISSRTGACHLLACASLVGMDVTATKESFDWVSTMPKMVLALCTILRLVDDLKTYEREQLTPHVASSIDSYMKQHDVSIEMARFKIEELKEEHWKDFNDEWLDPDSAQPRKLLEAIFNLTRTMEFIYNQADNFTYCHNLKDTISSLLVEAFPVN</aaseq>

Gene Sequence

<dnaseqindica>1..309#1078..1336#2029..2392#2620..2838#3874..4006#4332..4583#4713..5009#ATGGCCTCCTTCTCCGTGCATGCGCAGCCGTGGAGCAGCAGCTGCCAGCCCGCCGCTGCGGCGCCGTCGCAGAGACAATGCTCGACTACTCCCCCATGGAGGAGGCCGTGGCGGCAGCCACGGACACGGAGCCCCGGCACTTTGCGATGCCGGCAAGCGCAGCAGCAGCTGCTGCTTTCTACAGGCGTAATACAGCAGGACGCTGTTGATGATCGGTTAAACAAAAACCCTTGCAACTTCCACCCGTCTATATGGGGTGATTTCTTCCTTTACCATTCCAGCACTACTGCAGCTTCCTACCAACAACAGGTTGATCGACCAGACCTCTTTCTCTCAGTTACAATAATATAAGATTTTGTACGATGGTCTACGAATAGCATAATTAGTCTAGCTATGCCATTAATTTTTGTCTAATATAACGAGTCATTTCTATTTATAACAATAGAAATAGAACTTACGAAATGTTATAAATTATATTAATGAAAAAGCATCCAAAAACTATGTCGTATAGAACCTTAAAATAAAGATATTTTTTATTGTACTTGAGAAATTATCTTAAGGTTTCTAAATTTTACACTAAAAATTTTGATATTTCGAGGCACCAAGACCCATAGGTATCAAGTTTTGTACTACCGCTTAAATATGGTACCTCCCGTTATTTTCTCAAGAATGATAAAACTATTGTTATAAAAAATGTAAAAATATTATCTGATCAAACCTTTAGTCGTAGGATCGAACGAGATGTTTCACTACAAGAGAAACCCCCTTGAACGAGATGTTAATTTTATGTTGCTTCTGAAGGTGCTAAGGCTATGTTCGGCATTTGTTGTTGGAAACTAATCCCTTGTGCACATAAAATGGAGCGACTCATTAGCACATAATTAATGAAGTATTAATTTTTTTTTGAAAAATAGATTAATATGATTTTTGAAAGTAAATTCTGTATAGAAAATTTTTGAAAAAAACCACACAGTTTAATAATTTGGAAAGCACGTACATGAAAAACGAGAGAGATGAGTTGAGAAACTGAGCCAAAGGTATATCTGGTCAGAAATGACTTGCTATTATTTTTAGCAGGAATGGATCGTACAACTTGAGAGACTGAAGGAAGAAGTGGGAAATATGATAACAAGTTCAGTTACTTCTAGCCTGCTGGAGAGGCTGCATCTCATTGATGCATTGGAACGCCTTTGTGTGAACCACCTTTTTGAAGAGGAGATCAATATTTTGCTAATGCAAATTAGCAGCTCAAATAACGTCAACGATTGTGACGATGTTCATACAGTAGCTATGTGGTTTTATCTACTTCGTAAACATGGATACAAGGTTTCACAAGGTAAAACAAAATAAAACAAAAAAAATGAATAACTCCTCTTTCATTGTTTTGACATTGATTCATGGATAACAAGTGGTCCGAAAACTAGCATAATGCTAGGATCCCTGGCCGTCATTCGAGTTACCATGATATTCTCATTAAGATAAGGTTTTGTGTTTCTTAATTGTAATAACGGAGTCCATCGATCCACGGGTATATGTTTTCCTAACATAACTTTTCATATATCCTAATTAATATTTATTAGATAAAATTACATCATAAAGATTAATTAAATAGCGATTTATTAGATTTCTGGCACCTCACGATTTGTGAATTTCCAGTCACATAAAATTGCACATTGCTAAGACTAAAACTGCAGTGCTATACAATGTGTAATTTGAGTTAATTTAACTGTTATTGCTATATAAGTTTGAAATATTTTGCATGTAATTTTGTAATTTTTTCATGTAGTTTGCAATTTTTGTATGATAGAATAATTTATTGTTCTACCATTGAATTTACAGTGCATTAGCACTGTAATCTGTTTATATTCATCTCATTGACAATTTTACATCTGGAGAATCAAGAACACTATATATAGCAATTATTTTTCTTCAGGTTTTTATATCACCAAAGGGTCCGTTTGTATTCAAGTCATTCTATAATTTCTCAAAAGGATATAGACTTAACAATTTTGATTGCACGCATTGCAGATGTGTTTGTGAAATTCAAAGATGAAGAGGGAAATTTCATAGCAAAAAATCCAATGGACCTACTTGCCCTTTACAATGCTGCGCATTACAGGGTCCATGGAGAGAAAATACTTGATGATGCTATATTATTCACGAAACGATGCTTGCATTCAATGTTTCCCTCTCTAGAAGGATCATTAGCACGTGAGGTAAAATGTGCACTTGAGATACCCCTACCCAGAAGGGTTGGAATTTATGAGGCAAACTATTACATATCTACCTATGAGAAAGAGGGTAAAGTGCATGATATGATAGTACAACTTGCAAAGTTGAACTTTAATCTTATGCAACTCCAATACCAAGAAGAGTTGGACATCATTACAAGGTGAAGTAACAAATGCTATTTCAAAATTAGTTAATATAGCAAAAAGTTCAAGTAATAATAATTAAAGGACTTGTCCTGATTTATCCAATGACAGAGGTTGACAAATCCAACTTAATTGACCTTGTAAAATTGAAAGAGAACATAACTGTAAATGAATTCTCTCGATTGTTGTTTAAAAATAGCCCTATGTACATGTAAAATAAATCATTTTGATATTATATATATAGGTGGTGGAAGGATCTACAAATTCAATCAAAGCTCCCATTTGCTAGAGACAGAATTGTGGAGTGCTACTTGTGGATGTTAGGAGTATACTATGAACCAAATTGTTCACGAGGTCGAATAATATTGACCAAGGTTATTTCTATTGCAACAATCTTTGACGATACGTTCGATTCTTATGGAACAATAGAGGAGTGTGAATTGTTTACCAAGTGTCTAGAAAGGTATGTAGCCCTATCCCGATGCACAACTTTTATTCGTAGCTGAAAGAAATCAACTTTTCTATTTATGATGAAGTAAAAAAAATGTTTCAATTTTTTTAGCTCTACCCATATATACCTTTTAGTTGCAATTTTGTTGTTATATATAGTTTTACTTTACTTTTTTTTATCTAAGTAATTTGATTTTTTATATAATTTTTTATGAATTGTAGGTTTTATTTCATGTAATTTGGTAGTTTTCTTGTACATTAGATAATTTATTGTTCAACCTTTTAAATTTGATAAAGAAGGGAGTGGTTGGTGATCAATTCTAGTCAAAAAGAGGGAATGATGAAAAATTGGTTCAACCTTTTTTTGACCAATTTATTTCATCGAGGGAGTGATCAATTTTTTTTACTTATTGACTGCAAGTTTTCTCAAAAGAAATATCCAACAACATGACCATATAAATAATTAAGGGTTGGAACTGCAAAATTTTCAAACCAGTTTTGAACCTCTGTTTCATCCCTGGTTTTGTTTGTATTAAATCAATTCTTGCAAATATTTTTCATAGATTGTTTTTTGCGTTTTAACACAATAAATATTTATACTCCCATGATCTTATGACCACACAAGCCAAAAGGCATCGTTTTGCCGTTTGCTATGGCTACTAGTTTCTTGATTTTAATTTGGTGTCAGCATTTTTTTTTGTAAGAAAATCCATTATCTGTACTTCTCTTGTAATAATATATTTTATCAGCTCAATTTAATGAAACAAAGTTCCACCTTATACTTACTTTCAATGCGTTGTCATGGTTAACTAGAAATGCTAGCTGACATACAAGAAATGGGCTTCTATTGTCCATGGATAGGTTGGGAAAATTGAACAAAAGTGTCAACTGAATAAGAAACAAATTAATAGGCCTCATTTTGTGGGGAAATCCTGATTTAACCACATAAATGGGCTGGTGTTTTAGTTTGACTCCGAACATATATATGTGAACGAACAAGGATTGATACCTAAAAAAGAAGGGCATTATAGAGAATTTTGATGTGCAGTTGGGAGCTGGTGGCTGATGAACTACCGGACTGCATGAAACATGTCCTGGAAAAGGTTTTTCAGAGCTACCAGATAATCGAGCAAGAGCTGTCAGAAGATGAGAAATACCGCATGCCCTACCTCAGAAGCTTTGTAAGTCACTTTTGGCTGCACATATTTGGCATTTATCTCCATCTAATTTATATGACTAATATTCATTCCATCTGCTACTACATTTGTATTTCGATCTGTGTACAAATCTCTCATACACGTAGTCCTGTCTGACATTTCTCTATCTAAATCTAGAGAAATTGTATGGTTCTTAAGAAAGTACCTTTACATACTAACATTTTATACTAAAAAGTTTAATGCCTCAAGATAACTATTATTTGAAGGTATCAAGTTATACACTTATTTCCCGGTACCTTCCTAACAATGTTAAATTTACCCATATCTTTATATGCTCTTGTCCTTGCAGACAGAAGATCTGGTTCGAAATTACAACAGGGAGGTGAAAATGCGCGAGGAAAGTTATGTCCCAAAATCTGTAGAAGAGCACCTACAGATTTCATCAAGGACTGGGGCCTGTCATCTTCTTGCTTGCGCTTCACTCGTTGGAATGGATGTTACGGCGACCAAGGAATCTTTTGATTGGGTTTCAACTATGCCTAAGATGGTGCTGGCACTCTGCACAATTCTCAGACTAGTTGATGATCTCAAAACATATGAGGTAATTAACATATACTTATCATCTCCCTCCCTTGGATATTCAATCAAGAATGATATTTTCAGTGATGTGGTAATCTCTTCAGCAAATTAAAGCATGAGCTAAATAGTTTGATCGTTTGTTTGCCTCCAGAGAGAGCAGCTGACGCCTCATGTCGCTTCGTCAATCGACAGCTACATGAAGCAGCACGATGTCTCGATCGAAATGGCACGTTTCAAGATCGAAGAGCTGAAAGAGGAACACTGGAAAGATTTCAACGATGAGTGGCTGGACCCTGACAGTGCTCAGCCGAGGAAGCTGCTGGAGGCGATATTCAACCTGACGAGGACGATGGAGTTCATCTACAACCAAGCCGACAACTTTACGTACTGTCACAACCTCAAGGATACCATTAGCTCGCTGCTTGTGGAAGCGTTTCCTGTTAACTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA023063