BGIOSGA023082

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Revision as of 13:27, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA023082| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA023082, complete gene.| tag = P0458E1...")
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Gene Name

BGIOSGA023082

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA023082, complete gene.

LocusTag

P0458E11.23

Ensembl Transcript ID

BGIOSGA023082-TA

Ensembl Protein ID

BGIOSGA023082-PA

Length

6317

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:21947531..21953847

Sequence Coding Region

21947531..21947660,21951813..21952046,21952404..21952497,21952622..21952839,21952925..21953064
,21953200..21953847

Genome Context

<gbrowseImage1> name=IndicaChromosome06:21947531..21953847 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:21947531..21953847 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGAAGGACGTGGAGATGGCGGTGCGGAACGGAGACGGCGGCGGCGGCGGCGGCTACTACGCCACCCACCCGCACGGCGGCGCCGGCGGCGAGGACGTCGACGACGACGGCAAGCAGCGGCGAACCGGTAACGTATGGACGGCGAGCGCGCACATCATCACGGCGGTGATCGGCTCCGGCGTGCTCTCTCTCGCATGGGCAACGGCGCAGCTCGGCTGGGTGGTCGGGCCGGTGACTCTGATGCTCTTCGCCCTCATCACGTACTACACCTCTGGGCTCCTCGCCGACTGCTACCGCACTGGCGATCCGGTCAGCGGCAAGCGCAACTACACCTACATGGATGCCGTTGCGGCCTACTTAGGTGGCTGGCAAGTCTGGTCCTGTGGTGTTTTCCAATATGTCAACCTGGTTGGGACAGCAATTGGGTACACAATCACAGCATCCATCAGCGCAGCGGCTGTGCACAAGGCCAACTGCTACCACAAGAACGGCCACGATGCCGATTGCGGTGTCTACGACACCACGTACATGATCGTCTTTGGAGTCGTCCAGATCTTCTTCTCCATGCTGCCCAACTTCAGTGACCTCTCATGGCTTTCCATCCTCGCCGCGGTCATGTCATTCTCATACTCGACCATTGCCGTTGGCCTCTCGCTTGCGCGAACAATATCAGGTGCTACTGGTAAGACTACTCTGACTGGCGTTGAGGTTGGAGTTGACGTCACTTCAGCCCAGAAGATCTGGCTCGCGTTCCAAGCGCTCGGTGACATCGCGTTCGCCTACTCCTACTCCATGATCCTTATAGAAATTCAGGACACGGTGAAGTCTCCACCGGCGGAGAACAAGACGATGAAGAAGGCGACGCTGCTGGGGGTGTCGACCACGACGGCGTTCTACATGCTGTGCGGGTGCCTGGGGTACGCGGCGTTCGGGAACGCGGCGCCGGGGAACATGCTCACCGGGTTCGGCTTCTACGAGCCCTACTGGCTGATCGACTTCGCCAACGTCTGCATCGTGGTCCACCTGGTCGGCGCCTACCAGGTGTTCTGCCAGCCCATCTTCGCCGCCGTCGAGACGTTCGCCGCCAGGCGGTGGCCGGGCTCGGAGTTCATCACCCGGGAGCGCCCCGTCGTGGCCGGCAGGTCGTTCAGCGTCAACATGTTCAGGCTGACGTGGCGGACGGCGTTCGTGGTCGTCAGCACGGTGCTCGCCATCGTGATGCCCTTCTTCAACGACATCCTGGGCTTCCTCGGCGCCGTCGGGTTCTGGCCGCTGACGGTGTACTACCCGGTGGAGATGTACATCCGGCAGCGGCGGATACAGCGGTACACGTCCAGGTGGGTGGCGCTGCAGACGCTCAGTCTCCTCTGCTTCCTCGTCTCGCTCGCCTCCGCCGTCGCCTCCATCGAGGGCGTCAGCGAGTCGCTCAAGCACTACGTCCCCTTCAAGACCAAGTCGTGA</cdnaseq>

Protein Sequence

<aaseq>MAKDVEMAVRNGDGGGGGGYYATHPHGGAGGEDVDDDGKQRRTGNVWTASAHIITAVIGSGVLSLAWATAQLGWVVGPVTLMLFALITYYTSGLLADCYRTGDPVSGKRNYTYMDAVAAYLGGWQVWSCGVFQYVNLVGTAIGYTITASISAAAVHKANCYHKNGHDADCGVYDTTYMIVFGVVQIFFSMLPNFSDLSWLSILAAVMSFSYSTIAVGLSLARTISGATGKTTLTGVEVGVDVTSAQKIWLAFQALGDIAFAYSYSMILIEIQDTVKSPPAENKTMKKATLLGVSTTTAFYMLCGCLGYAAFGNAAPGNMLTGFGFYEPYWLIDFANVCIVVHLVGAYQVFCQPIFAAVETFAARRWPGSEFITRERPVVAGRSFSVNMFRLTWRTAFVVVSTVLAIVMPFFNDILGFLGAVGFWPLTVYYPVEMYIRQRRIQRYTSRWVALQTLSLLCFLVSLASAVASIEGVSESLKHYVPFKTKS</aaseq>

Gene Sequence

<dnaseqindica>1..130#4283..4516#4874..4967#5092..5309#5395..5534#5670..6317#ATGGCGAAGGACGTGGAGATGGCGGTGCGGAACGGAGACGGCGGCGGCGGCGGCGGCTACTACGCCACCCACCCGCACGGCGGCGCCGGCGGCGAGGACGTCGACGACGACGGCAAGCAGCGGCGAACCGGTACGGATCAAACCCGACCCCGACCCCTCGTGATTCCCCCGTCTCGTTAACCCTCCTCTTCTCCTCCCTCCGCCATGGATGATGATGTGGCTGTGCTGTTGTGTTTCCGTGCGGTGCGTGCGTGTCCTTGTGGTGGATTGGATTTTTTGCGGTTTTTGCTTCCTATTTTTGGGCGCATATATGCCCGCTTTATCAATCTCGCTTAGAGTCGAGTGGATCATCCTACTCATCAAAAGGGAGGTCTAGAAACACGGTGCACGCGAGATTTCTGGTAGGGAAAACTCCACGAAAAGTTGGTTCAAATTCGAGACAAAGTAGTTCGAATTCAAAAAAAAAAAAACCGAAACGTTTCAAGGGATCGGAAGGCGTGAACAACCATGGTCCTAGCTGGACCCTTGTCATCTCCTCGGTTTCTGTTCCAATCTAGCGAGCGGCGCGGCGCCGCCTCGGATGGATTTTTGGTTGGTGCTGACTGCTTGACTTCTGCGTTTTCTTCCTCCCTTTTCCCGGAAACTCCCATGGATTTTGGTTGGTTGGTGGCGCTCTGGTGCGGTAGGCTTCGTCCATAGCCAACACCGCCAATTAAGCCGCCATGAATGGACATCGTTGTGCGTATGTATCGTGGTAAAAAAAAATCGAACTACAGTGTTCTCTGTGAAGTGAAACCCTGGAGAATTTTTACTGCATTCAAGATAAACGGTGTGCGCTTTTTTTTTTTTTGTGTTTGTGTTTCCCTTTTTGGGTTCCCCAACGGAGCGCATGCAAGCGTCCGGCGACGTGTACGCTGGGTTTTTTTTTTCCAGCACTTCGTCTAGATCTGTCTGTTCCTAGAGTCCAAAATTAGTTAGTGGAAGCACAGGAGGTATGGTGGTGGAGTCGTGGACACTTCACACATTAGGATTAAAATCCGTGCATGAATTTTAGTGAGATCAACTATATCAAGACTAAAATCCCGTGTTAAGGCTTGTTTAGTTCACACTAAAATTGAAAGTTTGGTTGAAATTGAAACGATGTGACAGAAAAATTAGAAGTTTGCGTGTGTAGGAAAGTTTTGATGTGATGAAAAAGTTAGACGTTTGAAGAATTATTTTGGAATTAAACACGGCCTAAAATTTTAATGAGATCAGGGATATATCGCTAGTTTATTAGTTTTCATCTTTTAGGGCATATATTAGGGAACATATTTATAAAAATGTGTGAGTTTTCGAGTCCCTACCAATTTTTTGTAGTGCCAAAATCTAGGCAAGTTTTGGCAAACCCAAATATTTGGTAAAGTAAGATTGTTTTTTATCATATTTGGTTTGCTACAACATAGAGTCAAAATGTGAAATTGTAGTAAAGAATGTTCTAGATAATGCCAAATCTAGATTAGGTAGGAGTACCAATGAATGGGCTTCAATTCAAATCAAACACAAGTACTATTTAAATTACCAAAATATTGGTAGGGCAGTTTTTGGTAGCAATCTAAATTAGCCCTTCATCTTTTAGTGTTTCATGTGTATCTGCTATCTAATCGAAAAAAAAGAATTAGTTAATCAAGAATTAACTAATTTTTATATCACGTGAATAATTTGGCTTGCGCCGTTCCGCGTCGTGCGCGCTGTCGGATGCTGGATGCAAGAGGCCAGAGCCAACCATCCACAGCACCTAGCACAGCAGGGGGTCGCGCGCTGGTCAACAGCCGCGTACCCCCACGGTCAACGCGCATCAGCCACTCGATCTGAGGCATGCACGGTCTAGATGATGCCACGTTCGCAATAAAAGCTCCCCCTGATCAACAAGTGACGTGCTGTTTCACGGAGTGTGACGTGGCACGGGCAGTATAGTACGTGTACGTGTGAACACACGCGCATGCGACAGCGCATTTCCACGCGTGCAATTCTGACTCGCAAAAAGCGTATAGTAGTACTAGCTGCTTTTTTGCAATTTGTATTCCTTGAACGGCACAACGTATTTGGTGGAAAATTCATAAAATTCACCGTACTTTTTGACGAAAAACGGATATATGCTTGGTTGAGCGGTCCACTTTAAGCTACCAATATCGATTATCTTATCGTTAGTCAGCTTCAGTGAGATCATATCTAAAGTAACTGGTGCTGAACTCGTCAAGGAATCATTCCGGCGGCCTGAAAGCCCCTCTTTGGATGGCTCTGCGCCTCTGCCTGGCCGCTTCCGATCGGCCGGAATCTATGTCCTCGTACCTTTTACGCAGCACCAACTGATGATTGCGTGCTTTCAACATATTTTGGTTTGGAACGCAGTGATCTCGTATTTTATTCGAAATGCGTAAAAGCTTTGTTGATTCTACGGAAACGCTCTTTGGTTTGTAGAAAAAAAACCCTTCATATATCTTTTCCTTTGAAATTCCTTTGTAATGACAATCTTGTAAATAGTTTGGAATTTTTTTCATAAGATAATATCATCCGACGTGACTAGGGATTTTTAAGTTTTTGTTTGCGACCACTCATCTTATTTAAAAAATTTGTGCAAATAGAAAAAATGAAAAGCTGTGCTTAAAGTACTTTGGATAATAAAGTAAATAAAAAAAGAAATAATAATTCCAAATTTTTTTAAATAAGATGAGTGGGCAAACAGTGCAAGTAAAAAACTCAGAATACGGGACGGAGGGAGTAGTTTCTAAGGCCTGGTGGTCGGCATGAACCAATCTTTTTTTTTTCTAGCTGTACCTAAACACCTGTTTTAAAGTTTTCTTTCTCGTAGAATCATACTGTATGTAGAATTGAAGAAACTATGCCATCCTATTCATGTGCTTTTACATACTCTTCCCTATTCTTATGTTTTGAGTTTTCTTCCTTCTAGAGGGCCCTTGTTTCTACGTAATGTGAAGTTCTTTAGTGCCAACCGCCAAGACCTTAATCACGGACTAAGAGTCTGTTTAGCGGAGTTTAAAATTCTGAGCAACAACTAGCTGGTAGCCAACTTCTAAGAATCTGGAAAAGTTAGATCCTATAACTACAGCTTCTCAGAATTTATACCAAAAGCTGAACTATTTATGAGAGATTCTAATTCTGGAAAAAGCTGCTGCAGCTAAAATCTCCCTTAAAAGGGCTCTAAGTGGACTATATATATAGTGGACTTTTGTCTTATCTCCTCAGTTCTTTCAACGGAGTACTAGGCACAGCCCATATTGTGAAGGAGAAGAAAATGGCCAGACCTTTTGACTGCGAGGCATGGGCTGGATAGTCTTTGGGATGAGGTGACCGATGCGAGGGTGATAGATGCGCCGTAGACCTGCTGTTTCTGACCTTTTGGCTCACAGCTCTACGCACGACAACTCTACTCCGTGTAGGATAGTGTAGGCTAGTGTAGCGGTACTGAATATTCCGTATTCGTGCTGTACAACCGTGGTGTGCTCCCTGCGTACGGTGGTTTGGGGATTTTTTTTTTCACAAAATATGTGGATTTTTTAAAAATAAAGCTATCTAAATCTTGCGGAGTTATTGTAATGGTATTTTTTGGGATAATTTTTCATGACAGGTATTGTGCATTGATATAGTTAGTGGGCCTTTTTGAATGGTTAAAGTGAAAATATTTTTCACTGAACGCTTTCTAAACGTCAATGCATTTATGAATAGAGTAGAGAGTACTATGGAGTCTATGACCTTCTCAGATGGGAGACTCTCTAGCTACCGGGATGATACTAGACCTTTGTGTTCATCAAGAGATCACATGTTCACATGTGTAGGCCCTTTATATATGTTGAGTTGTTGACTTGTGTTCTTCAGAGGGTGACAGTCTCCATGGCTCAATGATTTGTTTGGAATTGTCTGTTCTGTTTCAGTTGGCATGGGACATGGGTCTTGTACTCTGTCCCAAAGTGTGCATGTGTCCTCATCCGATTAATCAAGGCACTGTGTTAATCATTCTTTAGAAACTCATTAACTGTATGCATACATAGACTGATTGAGGGGCTACAGATCATAAACCATGGATGCATGTGGGTATTAATCATTTTTTACCCTCGGTTTGGTGCATGCTGTCACTAAGTGGAGTGAACTTGTTCACAGTTGAGATTATGAGTAAATATCAAGGAGACAAGAACTGAAATTCGAAAGGAATTAAAGTCATAAATGAAATGATTGAATTTTCAGAATGTTGAAGGACTGAAAACTTGTGCAATTCGTTGAGCAGGTAACGTATGGACGGCGAGCGCGCACATCATCACGGCGGTGATCGGCTCCGGCGTGCTCTCTCTCGCATGGGCAACGGCGCAGCTCGGCTGGGTGGTCGGGCCGGTGACTCTGATGCTCTTCGCCCTCATCACGTACTACACCTCTGGGCTCCTCGCCGACTGCTACCGCACTGGCGATCCGGTCAGCGGCAAGCGCAACTACACCTACATGGATGCCGTTGCGGCCTACTTAGGTAAATACTATTCCTTCCATTTCAAAATATATGGAGCTGTTGATTTTAATATAACGTTTGTTCATTCGTATTATTTAAAAATTATATAATTATTATTTATTTTGTTGTGATTTGTTTTATCAATATAGAAACTAGTCTTAACTTATACTTTTACATATTTACACTAAAATTTTGAATAAAACGAATGTCAAACGTTATACGAAAAATCAACACCGTCATACATTTTGAAATTGAAATGGAGGTAGGAATAACAAGCTGTCTACATGAACATCGATATGCATGCGTCAGAGAATTTAGAATTTTTTCTCTGAATTCAGAGATGTCATACGAGCCTTGTTGCTGTTCTTAAATATGCAGGTGGCTGGCAAGTCTGGTCCTGTGGTGTTTTCCAATATGTCAACCTGGTTGGGACAGCAATTGGGTACACAATCACAGCATCCATCAGCGCAGCGTAAGTTCTGAAGAATTGATCTGTTCATAAATCACAATGGCATACTACAATTCTCCATTGCTTTCACAACTCAATGCTATGCACGGTTCTGACTTCTGAGGTTAATTTGAATGATCTTCTACAGGGCTGTGCACAAGGCCAACTGCTACCACAAGAACGGCCACGATGCCGATTGCGGTGTCTACGACACCACGTACATGATCGTCTTTGGAGTCGTCCAGATCTTCTTCTCCATGCTGCCCAACTTCAGTGACCTCTCATGGCTTTCCATCCTCGCCGCGGTCATGTCATTCTCATACTCGACCATTGCCGTTGGCCTCTCGCTTGCGCGAACAATATCAGGTGAAGAAATCTTTCTGAAGATGGTATCAGTGTCACTGCATATATAGTTTGTAAGCTTTCTCATCATCTCCATGTGTCTGTACAGGTGCTACTGGTAAGACTACTCTGACTGGCGTTGAGGTTGGAGTTGACGTCACTTCAGCCCAGAAGATCTGGCTCGCGTTCCAAGCGCTCGGTGACATCGCGTTCGCCTACTCCTACTCCATGATCCTTATAGAAATTCAGGTAAGCTGTGCACAGCAAAGTTCAGAGTTTGAGAAACATTTGAGCAACAGTCACAAACATGTCTCAGTTTGTTTGCTTGCAAGGTTTTTCAGTAACCGATGATGAGTCTGAAAAAAATGGCATTTGAAATTGCAGGACACGGTGAAGTCTCCACCGGCGGAGAACAAGACGATGAAGAAGGCGACGCTGCTGGGGGTGTCGACCACGACGGCGTTCTACATGCTGTGCGGGTGCCTGGGGTACGCGGCGTTCGGGAACGCGGCGCCGGGGAACATGCTCACCGGGTTCGGCTTCTACGAGCCCTACTGGCTGATCGACTTCGCCAACGTCTGCATCGTGGTCCACCTGGTCGGCGCCTACCAGGTGTTCTGCCAGCCCATCTTCGCCGCCGTCGAGACGTTCGCCGCCAGGCGGTGGCCGGGCTCGGAGTTCATCACCCGGGAGCGCCCCGTCGTGGCCGGCAGGTCGTTCAGCGTCAACATGTTCAGGCTGACGTGGCGGACGGCGTTCGTGGTCGTCAGCACGGTGCTCGCCATCGTGATGCCCTTCTTCAACGACATCCTGGGCTTCCTCGGCGCCGTCGGGTTCTGGCCGCTGACGGTGTACTACCCGGTGGAGATGTACATCCGGCAGCGGCGGATACAGCGGTACACGTCCAGGTGGGTGGCGCTGCAGACGCTCAGTCTCCTCTGCTTCCTCGTCTCGCTCGCCTCCGCCGTCGCCTCCATCGAGGGCGTCAGCGAGTCGCTCAAGCACTACGTCCCCTTCAAGACCAAGTCGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA023082