BGIOSGA023092

From RiceWiki
Revision as of 13:27, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA023092| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA023092, complete gene.| tag = P0528E1...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA023092

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA023092, complete gene.

LocusTag

P0528E12.25

Ensembl Transcript ID

BGIOSGA023092-TA

Ensembl Protein ID

BGIOSGA023092-PA

Length

3095

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:22185330..22188424

Sequence Coding Region

22185330..22185779,22186657..22186944,22187380..22187647,22188207..22188424

Genome Context

<gbrowseImage1> name=IndicaChromosome06:22185330..22188424 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:22185330..22188424 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCAAGCTCGTCGGAGCAACTCTCTACCTCTACCTCTTCCTCTTCCTCCTGCTGCTGCATCTCCATTGCCACCAATGCAAACCTGCTGCTGCTGCGAGCTTCGTCGTCCATGGCGGCGGCGGAGCAACGGCAAGGGCGGCGGCGGTGAGGGCGGTGTTCGTGTTCGGGAGCTCGCTGGTGGACAACGGCAACAACAACCACCTGAACGGCTCCGGCGCCGTGCGCGCCGACTACGCGCCCTACGGCGTCGACTTCCCGCTGGGCGCCACCGGCCGCTTCTCCAACGGCCGCAACGTCATCGACGCCCTCGGGGAGCTCCTCCGCCTCCCCGCCGCCGGCCTCCTCCCGCCTTTCGCCGACCCCGCCACCCGCGGCCGCGCCGCCCTCCACGGCGTCAACTTCGCCTCCGGCGGCTCCGGCATCCTCGACCTCACCGGCAAGAACAAGGGAGAGGTCTTGAGCCTAAAGCAGCAGATCACCAACTTTGAGGCAGTGACACTCCCTGACCTGCGGGCCCACCTGCAGGGAGCAACCACAGCCACCACCACCACCGGACACAAGATGAAGGGCCAGGATTTCTTTGACCAGTGTTACCTGCCCAAGAGCCTGTTTATCATTGGGACAGGTGGCAATGACTACTTGCTCAACTACTTCAACGCTGGTAGTGGGCCCACAAGGGCCCCCTTGTCAGAGTTCACAAGCTCACTCCTCACCAAGCTCTCAAACCACCTGCAGAGATTGTATGATCTAGGGGCAAGGAAGTTTGTGCTATTCTCCATCCAACCCCTGGGTTGCACCCCTGTGGTGAGGACCTTCCTCAACGCTACCAGTGATGCTTGCATTGAGCCGATGAACCATGCGGCGCTCCTCTTCAACTCTGGGCTAAGATCTATCGTTAAAAATCACAATGGTGGCGTGAGGTCACACATGCCCGCCGCGAGCTTCGTCTACGTCAATTCCTACAAGATCATTAGCGATATAATACAGCACCCGGCAAAATATGGCATCAGGAAAACGAGTCGAGCTTGCTGTGAGGTGTCGAGGGGAGGCGTGCTGTGTCAGAAGGGGGGGGCCATCTGCAGTGACAGGACCAAGTACGCCTTCTTCGATGGGCTCCACCCGACAGACGTGGTGAATGCCAGGCTGGCACGCAAGGCGTACGGCTCCAACTCGCCGGACAAAGTCTACCCTATCAATGTTAAGAAGTTGGCAATGCTGTAG</cdnaseq>

Protein Sequence

<aaseq>MAKLVGATLYLYLFLFLLLLHLHCHQCKPAAAASFVVHGGGGATARAAAVRAVFVFGSSLVDNGNNNHLNGSGAVRADYAPYGVDFPLGATGRFSNGRNVIDALGELLRLPAAGLLPPFADPATRGRAALHGVNFASGGSGILDLTGKNKGEVLSLKQQITNFEAVTLPDLRAHLQGATTATTTTGHKMKGQDFFDQCYLPKSLFIIGTGGNDYLLNYFNAGSGPTRAPLSEFTSSLLTKLSNHLQRLYDLGARKFVLFSIQPLGCTPVVRTFLNATSDACIEPMNHAALLFNSGLRSIVKNHNGGVRSHMPAASFVYVNSYKIISDIIQHPAKYGIRKTSRACCEVSRGGVLCQKGGAICSDRTKYAFFDGLHPTDVVNARLARKAYGSNSPDKVYPINVKKLAML</aaseq>

Gene Sequence

<dnaseqindica>1..450#1328..1615#2051..2318#2878..3095#ATGGCCAAGCTCGTCGGAGCAACTCTCTACCTCTACCTCTTCCTCTTCCTCCTGCTGCTGCATCTCCATTGCCACCAATGCAAACCTGCTGCTGCTGCGAGCTTCGTCGTCCATGGCGGCGGCGGAGCAACGGCAAGGGCGGCGGCGGTGAGGGCGGTGTTCGTGTTCGGGAGCTCGCTGGTGGACAACGGCAACAACAACCACCTGAACGGCTCCGGCGCCGTGCGCGCCGACTACGCGCCCTACGGCGTCGACTTCCCGCTGGGCGCCACCGGCCGCTTCTCCAACGGCCGCAACGTCATCGACGCCCTCGGGGAGCTCCTCCGCCTCCCCGCCGCCGGCCTCCTCCCGCCTTTCGCCGACCCCGCCACCCGCGGCCGCGCCGCCCTCCACGGCGTCAACTTCGCCTCCGGCGGCTCCGGCATCCTCGACCTCACCGGCAAGAACAAGGTCTGCGTTACTTGATGAGCAATTGTCCCTATATAGTAATTCCCTTCGTTCTAAAAATATACGATGACGCTGACTTTTTTATAATGTTTGATCAATCATTTTGTTTTTTTTAAAAATATAAATATTGTTTGTTTTATTGTTACTTGTTTTATTATAAAAAACTATAATCTAACTTCTATTTTTACAAATTTATATTGAATTTTTGAATAAATAGATGGCCAAACAATATGTAAAAAGTTAACGGCGTCGTATGTTTTAGGATGGATGGAGTATACTTCTTCATTCCTTGTAATGATGCTTGCGTTTATTTGAGGGTGAGGCTCTATTCGGTTGAGCTAAGGCTGAAGTTGTGAAAAAAAAGGTTCAAGACATATTTTTGGTAAAATTATTATGGGCTGATTTGGTTTAAAACCCTACTAAAATACTGGTAGTGTTAAAATCTAGATAAATTTTGACGCGGTCAAATTTTGTAGGGCGATATATTACTAGCTAGGTAAAAAATTTGGTCTTAATCCAAATACCAACAAAACACTATTTGAAACTACCAAAACAAATTGGAACCAATCCAAACATCCCCTATAAATCTATTCTTAAAAGTTTGAAAGCCACAACTAGAAACATAATGCCATAAAGAAACCTCAAATCAACTTATAAACTAAGCATCAAAATAGATTGCTTCCCTTGGATGGATGGTTAGGAGTTTTATTTATACGCATTGCTTGCGATGGGTTTTTTATAGGTTTCATTTTTATAAATTGCTCTGTTGTACTTTTTTTTCTTAATGAAATAAAGTGTATGGTTCTTGTGTTTCAAAAGAATTAAGATGTAAAATTAGCCAGCTTAATTGCTAATTTGTGTCTGTAACTAATCTTATTAGGGAGAGGTCTTGAGCCTAAAGCAGCAGATCACCAACTTTGAGGCAGTGACACTCCCTGACCTGCGGGCCCACCTGCAGGGAGCAACCACAGCCACCACCACCACCGGACACAAGATGAAGGGCCAGGATTTCTTTGACCAGTGTTACCTGCCCAAGAGCCTGTTTATCATTGGGACAGGTGGCAATGACTACTTGCTCAACTACTTCAACGCTGGTAGTGGGCCCACAAGGGCCCCCTTGTCAGAGTTCACAAGCTCACTCCTCACCAAGCTCTCAAACCACCTGCAGGTAGTACCACCTTAATTTAATGCACACCTTAATTAAGTAGGAGTATATCTTTGTGTACCCATAACATATGGATTTGCTATTAAAGCCACAGATATGGCATGTTAATTAATTATAACTACTGGATATGGTGGTATAGTTCCTGGTACATGTGAAATAAAGAGAAGGAACTGGGGAGAAAATGTACAGGCAGCTATATATATGTGGACCTTGAACTCAGACTGAGAAGTAATGAATGTGAAGGGTACATGACATAATAATATTGCAAGAGTACATAGTAGTTGGATGGATAGTACATTGATTGGTACTGTAGTCTTTCTTTTCTCCATATCATCCCTTTTATATTCTTCGAGATTACACATAATAATCAACAGATACAATAAATATCTTTTGTACATGTTTTATTTAAATTATGACTCTTATTTTTACTTTTTTCAGAGATTGTATGATCTAGGGGCAAGGAAGTTTGTGCTATTCTCCATCCAACCCCTGGGTTGCACCCCTGTGGTGAGGACCTTCCTCAACGCTACCAGTGATGCTTGCATTGAGCCGATGAACCATGCGGCGCTCCTCTTCAACTCTGGGCTAAGATCTATCGTTAAAAATCACAATGGTGGCGTGAGGTCACACATGCCCGCCGCGAGCTTCGTCTACGTCAATTCCTACAAGATCATTAGCGATATAATACAGCACCCGGCAAAATATGGTAATAATTAAGCGATCATATATTTCTGAAACTCAAAAGAAATTAGTTATGAGTGAAATGATGCACCCTCCCCTTTTCCTTTCCTACCACTACTATTTTCTCGTGATATTTCCAGGGTCTATTTGGTAGGGGAATTTTAAAGAAAAACAAAAGGAATTTAAAATTATAGTCTTTTTAGCTATATAGCTGTTTGGAATGCAGGAATGGATCAAGAATCCCTTGAAAAAACTTTCCTAACATTATCTATTCTATTGTTATTCTAGTGCAAATCAAGGGAAAAAATGTCCTCAAATCTAGGGAAAAAATTCCTTGAAAGAATCTATTACACCTTTTTTATTTTAAGCAAGTCTAAAATTCATGTTCCAAAACCACGTCCATATTAATTTTTCAGTGTTGTTTTTTTAATTATTCATATATTTCTATATATTTCTTTTTCCTACAATATTATTATTCATGTGTTTTTGTCCATCAATCCAAACATTCCTCATCACTCGTGCAAGCAACAAAGCTAGCTGTATTAAGTGCCTAATTTGCTTTGATGGTTTTTATAATTGCTCAGGCATCAGGAAAACGAGTCGAGCTTGCTGTGAGGTGTCGAGGGGAGGCGTGCTGTGTCAGAAGGGGGGGGCCATCTGCAGTGACAGGACCAAGTACGCCTTCTTCGATGGGCTCCACCCGACAGACGTGGTGAATGCCAGGCTGGCACGCAAGGCGTACGGCTCCAACTCGCCGGACAAAGTCTACCCTATCAATGTTAAGAAGTTGGCAATGCTGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA023092