Os11g0618700

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Revision as of 09:16, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0618700| Description = Protein of unknown function DUF594 family protein| Version = NM_001189728.1 GI:297728586 GeneID:9270662| Length = 48...")
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Gene Name

Os11g0618700

Description

Protein of unknown function DUF594 family protein

Version

NM_001189728.1 GI:297728586 GeneID:9270662

Length

4805 bp

Definition

Oryza sativa Japonica Group Os11g0618700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:25931941..25936745

Sequence Coding Region

25932245..25934461,25936364..25936513

Expression

GEO Profiles:Os11g0618700

Genome Context

<gbrowseImage1> name=NC_008404:25931941..25936745 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:25931941..25936745 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccgccgtcgatgacctccctgcctcgccgccgttgccgaccctgccttcgtgggcagatctggccccaccacgaccaaatcggggaggatacggtggcagcactggcggtggcgggcgcggtgtcgacggaggaagccgaggcgcagggcctggggttatttttggctacatacttttctgtgggaagactaaaaatgagtcctggtgaatttattgcaaattttctcatcaaatggaatcaggagaactacatcttgcttcgaatccgagtcatagtcgcattcctcatatcgctctacgcattgatgatgctcttctcgggcattttcctcttcgctatgaaaagatccatgttgagcttcctagatgctgtgactgacgccatcctggtgtatgttatgggggtcatgcaagccgcacctttcaagaaccagctgttcccagtctgggcccttatgctggtcagcttccgctctagcatcaattgcctctctagttatggaacgttttttgagctgagaaattcgttgaagcttttagctgtggcataccttaatataacacatgggtccaagttgtggcatgtcccattctggttattttggagtcttctggcactaaattgttgttacaggattctggcacgtcatgtagcatccaaatccttgtggaatggccggagttcagaacttcttcaggagtacatgggtgccaatggtaatgagagcaactttaaccctgaaagatgcaacccggagaccatggaaggatacaagtactttgtctatggagagtcacagaagagcagaatgaatggacacagcctaagtgttaaagacttgaggacaccaattaccttggacaagatttggcaatgtgaatgtgatgatgacatgctgctaagctccatcaaaaggcaggggaaggacctgagcctgtcctttgcattgtctcggttgctccggtgtaggctggaaggagcaaaactgcatgcagacactgtttccatgacccgaaagctgatcagcaagaggatcctcgcagaagatcctgaaaatgaacagctcggtatccgtatcttggagctggatgttgagtttctccgggactccctccacactagttaccctatggtcttctgcagcgggtttctctcactctccttcactatcctggcatgtttggttaagtttctcgtggttctatggctttacaaggacatcagtaaggtgtattcactggatctggatccgctgtctttttacaaagactttaataagcgggggctgcgcttatatattgatgaaacgagaatcaccacatattccttgaccagcgtgataatcttggagacgtgggaggtactcacttacttcgaatcaaactggacacgattactagccatgtgcaagtttgtgaattgcagaaacagatgcctgaaatttgtcctgaatatgctatttagattccattacatgcttaacttggtgaaaagatttgatatttcgtgtctgcaacagtgtcccaccatgttcatgcgatcatttggattctgctcaaccatgtttaagtgggaaatgactccttttattaaaggaaggaatccaaatgaaagtgtaaaggcaagagtcattcaagcactccgctccatggacctcgagggccatcctctgtcaaaagacctcccctcgccgcgtctcagtgtgagagctgagcgttattggttggcatccgttgcagatgtaccaagatgctcccgtgttattctggtctggcacattgcaacatgcctatgcgagatcaagtttgccaatgacagttttactggttgctgcttaaaatggatgtcgatgttaccatcaactgaggtggatgagaccgatgatgagctcgacaagtcatacgcggtgacatattacttgtcacgttactgtatgcacctgctggtctcaaagcgcaaactgctacccgaagacattttggtgtccaagaagaccctccaagacactgttcagtgtgctcgtgagatgctgaaaggctgcaactcgtttcagagcgtgtacgacaagcttatggaagaaccgcagaaagctcttgttccagacgctcatgacatgaatctgagtggaaacatattgcaacaaggtgctataatggccaatgcactcatcgtcaacgaggaggatgaggcatgtcgctgggagatcctagctgaggtgtgggctcacttgattgtgcacattgctcccagttccagaatagaagctcatgccgagaacctcaagtctggtagcgagttcataaccgtcatctgggctttgttttcccactgtggcatcgagaagagcgaattatggcagtag</cdnaseq>

Protein Sequence

<aaseq>MPPSMTSLPRRRCRPCLRGQIWPHHDQIGEDTVAALAVAGAVST EEAEAQGLGLFLATYFSVGRLKMSPGEFIANFLIKWNQENYILLRIRVIVAFLISLYA LMMLFSGIFLFAMKRSMLSFLDAVTDAILVYVMGVMQAAPFKNQLFPVWALMLVSFRS SINCLSSYGTFFELRNSLKLLAVAYLNITHGSKLWHVPFWLFWSLLALNCCYRILARH VASKSLWNGRSSELLQEYMGANGNESNFNPERCNPETMEGYKYFVYGESQKSRMNGHS LSVKDLRTPITLDKIWQCECDDDMLLSSIKRQGKDLSLSFALSRLLRCRLEGAKLHAD TVSMTRKLISKRILAEDPENEQLGIRILELDVEFLRDSLHTSYPMVFCSGFLSLSFTI LACLVKFLVVLWLYKDISKVYSLDLDPLSFYKDFNKRGLRLYIDETRITTYSLTSVII LETWEVLTYFESNWTRLLAMCKFVNCRNRCLKFVLNMLFRFHYMLNLVKRFDISCLQQ CPTMFMRSFGFCSTMFKWEMTPFIKGRNPNESVKARVIQALRSMDLEGHPLSKDLPSP RLSVRAERYWLASVADVPRCSRVILVWHIATCLCEIKFANDSFTGCCLKWMSMLPSTE VDETDDELDKSYAVTYYLSRYCMHLLVSKRKLLPEDILVSKKTLQDTVQCAREMLKGC NSFQSVYDKLMEEPQKALVPDAHDMNLSGNILQQGAIMANALIVNEEDEACRWEILAE VWAHLIVHIAPSSRIEAHAENLKSGSEFITVIWALFSHCGIEKSELWQ</aaseq>

Gene Sequence

<dnaseqindica>2285..4501#233..382#tatctaccaaaccgacttctctcgtctccatcgtactcacctcctcccctccgcttctcgtctctcctctcctcgccgtcgccatagccggactccgcgtgagttctcctccccgcctcgcgccaggactcagcgagcgttcacgagcgagcccggtgtgcctcgccccgttcccgtgccgactcctccccaacgccgaccccgtcctgctgccgtcgctggtctccctgccatgccgccgtcgatgacctccctgcctcgccgccgttgccgaccctgccttcgtgggcagatctggccccaccacgaccaaatcggggaggatacggtggcagcactggcggtggcgggcgcggtgtcgacggaggaagccgaggcgcaggtgagcagcgcctttcgccctctcgctgccgtgcctcctctccctcgccgcgtcgctctcccgtcaccggaggagggccgccgccgtgccacgtctctctctccctccgtccccaggtcgtcgccgaggagctcgaggagaggggagaggggtggaagaggaaatcctcgctcggggggggggggggggggggggcgtcgcctcaagcacccgtacccacacaacgggttccttccaccggcgcctaggcgaaaaggagctgggggggcgcgtctccctcagctcttgcaaggggacgatgccgacggaaaagcgaacggccgtcgctaggggcacggctgaagcaccacattggtgatggccttaaaacgtcacgtgacgatttaggagcgtttttaggtgtcccatgtggctgtttgagagcgtttgtaggaagtttaatggacttttagtatataatagataatgcttctaatcatatacttcctccgtttcacaatgtaagtcgttatagtatttcccacattcatattgatattaatgaatctagacatatatatctatctagatttattaacataaatatcaatgtggaaaatattagaatgacttacattgtggaacggaggaagtagctagtttgaatttgagactacaagaataggacagcagcaagttgatggtaggggcaatgtaatgtctattagtacaagtttgaataggagactacaagaataggacaacagcaagttgatggtaggtacaatgtaatatctattagtacaagaataggacagcagcaagttgatggtaggagtgtaatgtctattactagcagacaatggctccaatatatccaaaccatcttgctcgtttatcaccacgtttatattagccaaaagacctaaacaatgatcaatttgatcatttgaggagtaaattaatcacaagtgtttcctgacaaagtgttagaccttccattcacacggaaggtagcattgaccaaatactgtacaacctgaagaatgccaatttccatgccatctaccattgtagaccaaactacagaacaaaaggaaaaggcatgcttcgtcgtcctcctctccggtcaaccctggctgtttatcacggccaatctgccgccggagtgctatataaccggcaaccggtgcggctgcagcatcagcagacattcctcagctcacaatctgtcacagtgaattcacaccatactggctgtctcactagctaagaccccggagaagtgtgataagtcatcgctagtttaaacaatcaataggccaggcctctcaatttccatatgtcagtgctgtcagccagctgaaggactgaataccttagctagagttctctacatctgctcatgctgtggacatcgtccatgagtggctactgaatcctggatattggtaagaaattgtatttcagtatttgcattgcattattagatcacactcgccgttttatttttcttgcaattacaagcaatgaagcaatagattgcaaggagtataacatactcagctttcacaaacagagctgctgctgtagcaggctcctgtaaaggaatattttcaaacaaggtctgcaataaaatattttctggttttaaagtatgttcatggaaagcctcagtttgtttgtgctctatttcattaatcaatattgtgttcactactatcaaatacagatcagttgttagcaccaccacccttcccgtcccatatgggcagcctgtgaagccatgctttcttgaagcatgtaaatcttgttgcaatgatccagtatagcattatcagcataacctttcaatacatttaatttgccatatgttctggtaaccatttctaaagttactttttgtaaatttaacttgaccagggcctggggttatttttggctacatacttttctgtgggaagactaaaaatgagtcctggtgaatttattgcaaattttctcatcaaatggaatcaggagaactacatcttgcttcgaatccgagtcatagtcgcattcctcatatcgctctacgcattgatgatgctcttctcgggcattttcctcttcgctatgaaaagatccatgttgagcttcctagatgctgtgactgacgccatcctggtgtatgttatgggggtcatgcaagccgcacctttcaagaaccagctgttcccagtctgggcccttatgctggtcagcttccgctctagcatcaattgcctctctagttatggaacgttttttgagctgagaaattcgttgaagcttttagctgtggcataccttaatataacacatgggtccaagttgtggcatgtcccattctggttattttggagtcttctggcactaaattgttgttacaggattctggcacgtcatgtagcatccaaatccttgtggaatggccggagttcagaacttcttcaggagtacatgggtgccaatggtaatgagagcaactttaaccctgaaagatgcaacccggagaccatggaaggatacaagtactttgtctatggagagtcacagaagagcagaatgaatggacacagcctaagtgttaaagacttgaggacaccaattaccttggacaagatttggcaatgtgaatgtgatgatgacatgctgctaagctccatcaaaaggcaggggaaggacctgagcctgtcctttgcattgtctcggttgctccggtgtaggctggaaggagcaaaactgcatgcagacactgtttccatgacccgaaagctgatcagcaagaggatcctcgcagaagatcctgaaaatgaacagctcggtatccgtatcttggagctggatgttgagtttctccgggactccctccacactagttaccctatggtcttctgcagcgggtttctctcactctccttcactatcctggcatgtttggttaagtttctcgtggttctatggctttacaaggacatcagtaaggtgtattcactggatctggatccgctgtctttttacaaagactttaataagcgggggctgcgcttatatattgatgaaacgagaatcaccacatattccttgaccagcgtgataatcttggagacgtgggaggtactcacttacttcgaatcaaactggacacgattactagccatgtgcaagtttgtgaattgcagaaacagatgcctgaaatttgtcctgaatatgctatttagattccattacatgcttaacttggtgaaaagatttgatatttcgtgtctgcaacagtgtcccaccatgttcatgcgatcatttggattctgctcaaccatgtttaagtgggaaatgactccttttattaaaggaaggaatccaaatgaaagtgtaaaggcaagagtcattcaagcactccgctccatggacctcgagggccatcctctgtcaaaagacctcccctcgccgcgtctcagtgtgagagctgagcgttattggttggcatccgttgcagatgtaccaagatgctcccgtgttattctggtctggcacattgcaacatgcctatgcgagatcaagtttgccaatgacagttttactggttgctgcttaaaatggatgtcgatgttaccatcaactgaggtggatgagaccgatgatgagctcgacaagtcatacgcggtgacatattacttgtcacgttactgtatgcacctgctggtctcaaagcgcaaactgctacccgaagacattttggtgtccaagaagaccctccaagacactgttcagtgtgctcgtgagatgctgaaaggctgcaactcgtttcagagcgtgtacgacaagcttatggaagaaccgcagaaagctcttgttccagacgctcatgacatgaatctgagtggaaacatattgcaacaaggtgctataatggccaatgcactcatcgtcaacgaggaggatgaggcatgtcgctgggagatcctagctgaggtgtgggctcacttgattgtgcacattgctcccagttccagaatagaagctcatgccgagaacctcaagtctggtagcgagttcataaccgtcatctgggctttgttttcccactgtggcatcgagaagagcgaattatggcagtagcagaaaaagggtgcagagtctgggaacagcacttttctggattggctaaccagagcagtgatgtagcagatacccatgttcaggaggctggtcctgattctggcatgtcctgaaacctgaattgctgatggctgatgctcttctcccctcgtgttttcagttttcaataatgggtgtgtttcacgccaaaattagaagtttggttgaaattggaaagatgtgacggaaaagttgaaagtttgtgtgtgtaggaaagttttgatgtaatggaaaaattgaaagtttgaagaaaaagtttggaact</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0618700, RefSeq:Os11g0618700