BGIOSGA023159

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Revision as of 13:28, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA023159| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA023159, complete gene.| tag = OsI_235...")
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Gene Name

BGIOSGA023159

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA023159, complete gene.

LocusTag

OsI_23511

Ensembl Transcript ID

BGIOSGA023159-TA

Ensembl Protein ID

BGIOSGA023159-PA

Length

6530

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:23665248..23671777

Sequence Coding Region

23665248..23665656,23666050..23668014,23669090..23669142,23669799..23670033,23671425..23671777

Genome Context

<gbrowseImage1> name=IndicaChromosome06:23665248..23671777 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:23665248..23671777 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCTCTTCGAGTGTCCTGTCTCCAAACATCGCATGGGTTCTTTGTCACTTCATCTTTTGCAGCATATCGTTAGCCATCTGCAATGAAACTGGCGATAGACAGGCTCTCCTTTGCTTCAAGTCTCAGCTCTCTGGTCCATCTAGAGTTCTATCCTCATGGAGCAACACATCCTTGAATTTCTGCAACTGGGATGGAGTCACCTGCAGCTCACGAAGTCCTCCCCGGGTCATTGCAATAGATCTCTCATCAGAAGGCATCACGGGCACCATATCACCTTGCATTGCCAACCTGACCTCTCTTATGACACTTCAACTGTCAAACAACAGCCTCCATGGCAGCATACCACCCAAGCTTGGCCTCCTGAGAAAACTCAGGAACCTCAACCTCAGCATGAACTCTTTAGAAGGTAGCATCCCCTCTGCTTTTGGGAACCTTTCTAAGCTGCAAACACTAGTCCTCACTAGCAACGGGCTAACAGGTGACATACCACCATCTCTAGGCAGCAGCTTCTCTCTCAGATATGTTGATCTTGGGAATAATGATATCACAGGAAGCATACCAGAGTCCTTGGCAAACAGCTCATCTCTCCAAGTACTTAGGCTCATGAGCAATAATCTTAGTGGAGAAGTCCCAAAGTCTCTATTCAATACTTCATCACTTACCGCCATTTTCCTACAACAAAACAGCTTTGTTGGTTCTATACCCGCTATTGCGGCCATGTCCTCCCCCATTAAATATATTTCCTTAAGGGACAATTGCATCTCAGGAACAATACCGCCCTCACTAGGTAACCTTTCTTCCCTACTTGAACTTCGCCTTTCTAAGAACAATTTAGTTGGTAGCATTCCAGAGAGCTTAGGTCATATCCGAACACTAGAGATACTGACCATGAGTGTGAACAACTTGTCTGGTCTAGTTCCACCATCTCTCTTCAACATTTCATCCCTGACATTTCTTGCTATGGGAAACAACTCGCTCGTGGGAAGATTACCCTCTGATATTGGCTACACACTTACAAAAATTCAGGGCTTGATCCTCCCGGCAAACAAGTTTGTTGGCCCAATTCCAGCTTCACTTCTCAATGCCTACCACCTAGAGATGCTCTACCTAGGTAATAACAGTTTCACTGGACTCGTGCCATTCTTTGGATCATTACCGAATTTGGAAGAACTTGATGTGTCATACAACATGCTAGAACCGGGCGATTGGAGCTTTATGACATCACTCTCGAATTGCTCTAAATTGACTCAACTGATGTTAGATGGGAACAGCTTCCAAGGAATTTTGCCAAGTTCAATCGGCAATCTTTCTAGCAATCTTGAGGGATTATGGCTAAGAAATAACAAAATCTATGGACCGATACCGCCAGAAATAGGTAATCTAAAGAGTCTCAGTATATTGTTTATGGATTACAATCTTTTCACTGGTACTATACCACAAACAATTGGAAATCTGAACAACTTAACTGTTCTATCATTTGCACAAAATAAGCTCTCAGGCCATATCCCTGACGTTTTTGGCAACCTAGTTCAGTTGACAGATATAAAATTGGATGGGAACAACTTCAGTGGAAGAATACCTTCAAGTATAGGGCAATGTACTCAACTCCAGATACTCAACCTTGCTCACAACTCATTAGATGGGAATATACCAAGTATAATATTCAAAATTACTTCGCTTTCTCAAGAGATGAACTTGTCACACAATTACTTGACTGGAGGAATGCCAGACGAAGTTGGAAATCTCATTAATTTGAACAAACTTGGAATCTCAAACAACATGTTGTCTGGAGAGATCCCATCCTCCCTTGGCCAGTGTGTGACTCTGGAGTATCTTGAGATACAAAGCAACTTCTTTGTAGGAGGTATTCCACAATCTTTTATGAAATTAGTAAGTATAAAAGAGATGGATATATCTCGGAATAATTTGTCTGGGAAAATCCCACAGTTCCTCAACTCGCTGAGTTCCCTACATGACCTCAATTTATCCTTCAACAATTTTGATGGAGTCATTCCAACGGGTGGCGTTTTCGACATTGACAATGCAGTATCAATTGAAGGAAATAATCATTTGTGTACAAGCGTTCCAAAAGTTGGTATTCCTTCTTGTTCTGTTTTGGCTGAGAGGAAAAGGAAACTCAAGATCTTGGTTCTAGTCCTAGAGATACTGATACCAGCTATCATTGCTGTTATAATCATTCTATCCTATGTTGTGAGAATTTATGGAATGAAGGAGATGCAAGCAAACCCACATTGCCAACAAATTAATGACCACGTGAAAAACATAACATATCAAGACATTGTAAAGGCTACAGATAGGTTCAGTTCTGCCAATTTAATTGGCACAGGATCGTTTGGGACGGTTTACAAAGTTTTAGGCAGCGGTCATGTCAAGTTCTTCCAAAAGAAGTTGAATACATCTATGGGTTGTGCGCTGGCTCCCTCTTCTGGGTATGGGCGCTCCATGGTGGTGGAGGACACGGGCGGCGACGAGTCGGGGCACGGCGTGGCCAAGCTCCTCAGATTTGGTGGCATCGGCTTATCGGGGCGCGGCGGCGGTGGCACTGTGGCCTTCCACTGTGGCGGGGTGGCTGGGCGGAGAGGCGGCCATCCTCCCCAAGCCGGCGCGCCGACGCTCGGATCTCGGCGTTGTGGAGCGGAGTATGGCATGAGTGAAGTGATATCAACCAAGGGTGATGTCTACAGCTTCGGTGTGATTTTATTGGAAATGATAACAGGGAGTAGTCCTACTGATGAAAAAATCAATAATGGTACAAGCCTTCATGAACATGTGGCAAGAGCTTTTCCCAAGAATACCTATGAGATTGTTGATCCCAGGATGCTACAAGGTGAAATGAACATAACAACAGTGATGCAGAATTGCATCATTCCATTGGTCAGAATAGGTCTATGCTGCTCTGCTGCATCTCCTAAGGACCGATGGGAAATGGGGCAAGTTTCTGCCGAAATCCTTAAGATCAAGCATATATTCTCAAGCATACATGGTGTATGA</cdnaseq>

Protein Sequence

<aaseq>MASSSVLSPNIAWVLCHFIFCSISLAICNETGDRQALLCFKSQLSGPSRVLSSWSNTSLNFCNWDGVTCSSRSPPRVIAIDLSSEGITGTISPCIANLTSLMTLQLSNNSLHGSIPPKLGLLRKLRNLNLSMNSLEGSIPSAFGNLSKLQTLVLTSNGLTGDIPPSLGSSFSLRYVDLGNNDITGSIPESLANSSSLQVLRLMSNNLSGEVPKSLFNTSSLTAIFLQQNSFVGSIPAIAAMSSPIKYISLRDNCISGTIPPSLGNLSSLLELRLSKNNLVGSIPESLGHIRTLEILTMSVNNLSGLVPPSLFNISSLTFLAMGNNSLVGRLPSDIGYTLTKIQGLILPANKFVGPIPASLLNAYHLEMLYLGNNSFTGLVPFFGSLPNLEELDVSYNMLEPGDWSFMTSLSNCSKLTQLMLDGNSFQGILPSSIGNLSSNLEGLWLRNNKIYGPIPPEIGNLKSLSILFMDYNLFTGTIPQTIGNLNNLTVLSFAQNKLSGHIPDVFGNLVQLTDIKLDGNNFSGRIPSSIGQCTQLQILNLAHNSLDGNIPSIIFKITSLSQEMNLSHNYLTGGMPDEVGNLINLNKLGISNNMLSGEIPSSLGQCVTLEYLEIQSNFFVGGIPQSFMKLVSIKEMDISRNNLSGKIPQFLNSLSSLHDLNLSFNNFDGVIPTGGVFDIDNAVSIEGNNHLCTSVPKVGIPSCSVLAERKRKLKILVLVLEILIPAIIAVIIILSYVVRIYGMKEMQANPHCQQINDHVKNITYQDIVKATDRFSSANLIGTGSFGTVYKVLGSGHVKFFQKKLNTSMGCALAPSSGYGRSMVVEDTGGDESGHGVAKLLRFGGIGLSGRGGGGTVAFHCGGVAGRRGGHPPQAGAPTLGSRRCGAEYGMSEVISTKGDVYSFGVILLEMITGSSPTDEKINNGTSLHEHVARAFPKNTYEIVDPRMLQGEMNITTVMQNCIIPLVRIGLCCSAASPKDRWEMGQVSAEILKIKHIFSSIHGV</aaseq>

Gene Sequence

<dnaseqindica>1..409#803..2767#3843..3895#4552..4786#6178..6530#ATGGCCTCTTCGAGTGTCCTGTCTCCAAACATCGCATGGGTTCTTTGTCACTTCATCTTTTGCAGCATATCGTTAGCCATCTGCAATGAAACTGGCGATAGACAGGCTCTCCTTTGCTTCAAGTCTCAGCTCTCTGGTCCATCTAGAGTTCTATCCTCATGGAGCAACACATCCTTGAATTTCTGCAACTGGGATGGAGTCACCTGCAGCTCACGAAGTCCTCCCCGGGTCATTGCAATAGATCTCTCATCAGAAGGCATCACGGGCACCATATCACCTTGCATTGCCAACCTGACCTCTCTTATGACACTTCAACTGTCAAACAACAGCCTCCATGGCAGCATACCACCCAAGCTTGGCCTCCTGAGAAAACTCAGGAACCTCAACCTCAGCATGAACTCTTTAGAAGGTAACATTCCATCTCAACTTTCTTCATGTTCCCAAATTGAAATCCTAGATTTGTCAAGCAATTCCTTCCAAGGTGCAATCCCAGCTAGCCTAGGCAAATGCATACATCTTCAGGATATTAATCTCAGCAGAAACAATTTGCAAGGTAGAATCCCCTCTGCTTTTGGGAATCTTTCTAAGCTGCAAGCACTGGTCCTCACTAGCACTGGTCCTCACAGATGAACCTCAACCTCAGTATGAACACTTTAGAAGGTAACATCCCGTCTGAACTTTCTTCAGTTCGCAACTAGAAATCCTAGGTTTATGGATCAATTCCTTCCAAGGTGAGATCCCAGCTAGACTAAGTAAATGCTTACATCTTCAGGAGATTAATCTCAGCAGAAATCATTTGCAGGTAGCATCCCCTCTGCTTTTGGGAACCTTTCTAAGCTGCAAACACTAGTCCTCACTAGCAACGGGCTAACAGGTGACATACCACCATCTCTAGGCAGCAGCTTCTCTCTCAGATATGTTGATCTTGGGAATAATGATATCACAGGAAGCATACCAGAGTCCTTGGCAAACAGCTCATCTCTCCAAGTACTTAGGCTCATGAGCAATAATCTTAGTGGAGAAGTCCCAAAGTCTCTATTCAATACTTCATCACTTACCGCCATTTTCCTACAACAAAACAGCTTTGTTGGTTCTATACCCGCTATTGCGGCCATGTCCTCCCCCATTAAATATATTTCCTTAAGGGACAATTGCATCTCAGGAACAATACCGCCCTCACTAGGTAACCTTTCTTCCCTACTTGAACTTCGCCTTTCTAAGAACAATTTAGTTGGTAGCATTCCAGAGAGCTTAGGTCATATCCGAACACTAGAGATACTGACCATGAGTGTGAACAACTTGTCTGGTCTAGTTCCACCATCTCTCTTCAACATTTCATCCCTGACATTTCTTGCTATGGGAAACAACTCGCTCGTGGGAAGATTACCCTCTGATATTGGCTACACACTTACAAAAATTCAGGGCTTGATCCTCCCGGCAAACAAGTTTGTTGGCCCAATTCCAGCTTCACTTCTCAATGCCTACCACCTAGAGATGCTCTACCTAGGTAATAACAGTTTCACTGGACTCGTGCCATTCTTTGGATCATTACCGAATTTGGAAGAACTTGATGTGTCATACAACATGCTAGAACCGGGCGATTGGAGCTTTATGACATCACTCTCGAATTGCTCTAAATTGACTCAACTGATGTTAGATGGGAACAGCTTCCAAGGAATTTTGCCAAGTTCAATCGGCAATCTTTCTAGCAATCTTGAGGGATTATGGCTAAGAAATAACAAAATCTATGGACCGATACCGCCAGAAATAGGTAATCTAAAGAGTCTCAGTATATTGTTTATGGATTACAATCTTTTCACTGGTACTATACCACAAACAATTGGAAATCTGAACAACTTAACTGTTCTATCATTTGCACAAAATAAGCTCTCAGGCCATATCCCTGACGTTTTTGGCAACCTAGTTCAGTTGACAGATATAAAATTGGATGGGAACAACTTCAGTGGAAGAATACCTTCAAGTATAGGGCAATGTACTCAACTCCAGATACTCAACCTTGCTCACAACTCATTAGATGGGAATATACCAAGTATAATATTCAAAATTACTTCGCTTTCTCAAGAGATGAACTTGTCACACAATTACTTGACTGGAGGAATGCCAGACGAAGTTGGAAATCTCATTAATTTGAACAAACTTGGAATCTCAAACAACATGTTGTCTGGAGAGATCCCATCCTCCCTTGGCCAGTGTGTGACTCTGGAGTATCTTGAGATACAAAGCAACTTCTTTGTAGGAGGTATTCCACAATCTTTTATGAAATTAGTAAGTATAAAAGAGATGGATATATCTCGGAATAATTTGTCTGGGAAAATCCCACAGTTCCTCAACTCGCTGAGTTCCCTACATGACCTCAATTTATCCTTCAACAATTTTGATGGAGTCATTCCAACGGGTGGCGTTTTCGACATTGACAATGCAGTATCAATTGAAGGAAATAATCATTTGTGTACAAGCGTTCCAAAAGTTGGTATTCCTTCTTGTTCTGTTTTGGCTGAGAGGAAAAGGAAACTCAAGATCTTGGTTCTAGTCCTAGAGATACTGATACCAGCTATCATTGCTGTTATAATCATTCTATCCTATGTTGTGAGAATTTATGGAATGAAGGAGATGCAAGCAAACCCACATTGCCAACAAATTAATGACCACGTGAAAAACATAACATATCAAGACATTGTAAAGGCTACAGATAGGTTCAGTTCTGCCAATTTAATTGGCACAGGATCGTTTGGGACGGTTTACAAAGGTAATCTAGACCGTCAGCAAGATGAGGTTGCCATCAAAGTATTTAACCTTGGAATTTATGGGGGCCAAAGGAGCTTTAGTGTGGAGTGTGAAGCTCTAAGAAACATTCGCCATCGAAATCTTGTAAAAATCATCACTCTGTGCTCTTCAGTGGATTCCAATGGGGCAGACTTCAAAGCCCTTGTGTTCCAATATATGGCCAACGGGAACTTGGACACTTGGCTACATCCAAGGGCTCATGAACACAGTGAGAGGAAAACTCTGACTTTTAACCAAAGAATCAATATAGCCTTGGATGTAGCATTTGCTTTGGACTATCTGCATAACCAATGTGCATCTCCGCTAGTACATTGTGACTTGAAGCCAAGCAATATCCTTTTGGACCTTGACATGATTGCTTATGTCAGTGACTTTGGCCTAGCAAGATGTCTAAACAATACCTCAAATGCATATGAAGGAAGTTCAAAATCTTTGGCTTGCCTAAAGGGATCTATAGGATACATCCCACCAGGTGAGATAACCATATTCATAATGGCCAACTCTTTTTGTTCTTCATAGAATTGTGGAGACAGGACATATATAATATCTAATTTATTACATTCATAAATTAAATGCAGAGTATGGCATGAGTGAAGTGATATCAACTAAGGGTGATGTCTACAGCTTCGGTGTGATTTTATTGGAAATGATAACAGGGAGTAGTCCTACTGATGAAAAAATCAATAATGGTACAAGCCTTCATGAACATGTTGCAAGAGCTTTTCCCAAGAATACCTATGAGATTGTTGATCCCAGGATGCTACAAGGTGAAATGAACATAAAAACAGTGATGCAGAATTGCATCATTCCATTGGTCAGAATAGGTCTATGCTGCTCTGCTGCATCTCCTAAGGACCGATGGGAAATGGGGAAAGTTTCTGCCGAAATCCTTAAGATCAAGCATATATTCTCAAGCATACATGGTGTATGAAATAAAGCATCAGCAGGATGGTAGCTAGTGTTGTATTTAAATGACAATGGTTATACAGAGCTACTACCTTTTCCATTTTCATTTGCATCTTGTACATCTATTAAAGTTTTAGGCAGCGGTCATGTCAAGTTCTTCCAAAAGAAGTTGAATACATCTATGGTAGGACCAATTGAATGGTAGGACCTCAACTAATTTGCACTAGTATTCCGATCGAAGCTAGGCAATCGTCAAAGCTAGATTTGTGTCAGATTGCAAAACCTCAAGTTCGGACATGAACCCAATAGTACAAAATTAGCACAATCAAGGGCAAATAAGAGTAGAGACGGACGCACGCATCAATCTCACACCGCCTGATTCGCACCAAACAAGATGATAGATCAAAGCAGACAGATAGGCACAAATTGCAAAGGTTAGGGCCAAAGGGGGCGCACCTCATATCATAGCTTCCTTTGTGTCCCGGCTACTCTCGGAACCCTAGCTACCGCGCCGCGCCACGTGGACCTCGTCGTATCTCCGGCAGCGTGCCCCGGAATAGGGCGTCCCCGGCCGCCGGCCAACCACACCACACCAGCCGCCATGCCTCGGCGCCGCAGCTCGCGCGCCAGCGAACCAAAACATCGGTCGCCGCAAGAGATCAGCACCGGCCACGAGCGTGCGCCGCCGCCGATGCCAGCCTCGGTGATGGGATGGCCTGCGACCGCCGTGTGTGCTGCGCGCGCGCGCGCTCGCTGAGGCGCCGCCGTCGTCGCGCGTCGGCCGTCGGCTGCGGCGAGATGGCTGATTTCCTCGGCTCGGCTCGGCTCGGGTCTATGTAGGGTTGTGCGCTGGCTCCCTCTTCTGGGTATGGGCGCTCCATGGTGGTGGAGGACACGGGCGGCGACGAGTCGGGGCACGGCGTGGCCAAGCTCCTCAGATTTGGTGGCATCGGCTTATCGGGGCGCGGCGGCGGTGGCACTGTGGCCTTCCACTGTGGCGGGGTGGCTGGGCGGAGAGGCGGCCATCCTCCCCAAGCCGGCGCGCCGACGCTCGGATCTCGGCGTTGTGGAGCGGGTTGGCTCGTCTGCGGCGGCAGCGCAGTAGTGGCCTCGGCGGCGGGCAGACGACTTGGAGCGGGGGACAGCGACGAGCAGATTACTTGGAGCGGCGCCTCCCCCTTCCTCCTCCAGGCTCCAGCCTCCGCGCCATGGCCCGCGCGGCGACGGCGTCAGGTGGCTATGCTTGTGCTTTTCCCGCTCTCTCTCTCTCTCTCCTCTACGCAGTTGCGCCTGTGCTTTTCACGGAAGAACGGGTGACCAAGTTTAGCTACTCAGTCTTCACTTGGCTACACATGTAGAGGACCTAGCACTGAATATGCCGTTCCTTCCTCTGAGACTGAATGCCACTTAGGTGTATTATAAACGTCCTTACGAGACTTAGTATCCCAGTAGCTAGTGTTCTCTCCGTCTCTAAATATAAGGGATTTTTGTTGAATATAACATATCCTAGTATAACGAATCTGTCCAGATTCATTGTATTAGAATGTATCACATCCATCCAAAATCTCTTATGTTTAGGAGGTGTTTGGAAGAGAGGGGCTCTCAAAAATATAACTAGAGACAGAGAAAGTACCCCACTAGGTATCAAAGCTGCTGGGAGGAGTATTGCGCTGTCGCTGTCTGGCCAACCGACAAGCCGGTGATTCCTCTCCAGTTCTCTGCTCCTCTCCTCGGCTCATCCCTTATTTCCTGCTGCTGTTGGCGTTGCCCTGCTCATGCCGTGTCTAGCGTTTCCTTTCTGGCTTTCTGCGCCATCGCTTCCTGGCATCCTAGCTGCCGGCACCGGTGCCACCGTCTTCTTCTAGTGTCGCCGCGTGCGCTGTGTCACGGAGCACGAGTGTGTGGCGCGACAGTGCTAGACATGTGATGAGGAAGCGGAGCGTGAGATCACGTTAGCGCCATAAATAATCTTTGTCCATATAAACGACACCTCATCCGGTAGCCGTTCTCTATTTGAAATCCAACAAATTCTTTTTGTCGAATTTATTTGTAGCGCCCGTTCCGTCGTGGCGCCTAGCGGGAAAATTATCTCTTAAAAAACCCTAATTGCGAAATTTGTTTCCTTGCTTGTTGTCTAGTGTCCGTGCCATCTCAAGATCTCAAATCCCCGATCTATCGTCGAGTTCAATCCCGAATCCATATCCTTCCAAATCAATTCCCCCGCAAAAGTCTATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAATACCTCAAATGCATATGAAGGAAGTTCAAAATCTTGGGCTGCCTAAAGGGATCTATAGGATACATCCCACCAGGTGAGATAACCATATTCATAATGGCCAACTCTTTTNGTTCTTCATAGAATTGTGGAGACAGGACATATAAAATATCTAATTTATTACATTCATAAATTAAATGCAGAGTATGGCATGAGTGAAGTGATATCAACCAAGGGTGATGTCTACAGCTTCGGTGTGATTTTATTGGAAATGATAACAGGGAGTAGTCCTACTGATGAAAAAATCAATAATGGTACAAGCCTTCATGAACATGTGGCAAGAGCTTTTCCCAAGAATACCTATGAGATTGTTGATCCCAGGATGCTACAAGGTGAAATGAACATAACAACAGTGATGCAGAATTGCATCATTCCATTGGTCAGAATAGGTCTATGCTGCTCTGCTGCATCTCCTAAGGACCGATGGGAAATGGGGCAAGTTTCTGCCGAAATCCTTAAGATCAAGCATATATTCTCAAGCATACATGGTGTATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA023159