BGIOSGA023171

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Revision as of 13:28, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA023171| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA023171, complete gene.| tag = P0633E0...")
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Gene Name

BGIOSGA023171

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA023171, complete gene.

LocusTag

P0633E08.7

Ensembl Transcript ID

BGIOSGA023171-TA

Ensembl Protein ID

BGIOSGA023171-PA

Length

2731

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:23931153..23933883

Sequence Coding Region

23931153..23931183,23931289..23931391,23932697..23933054,23933135..23933576,23933689..23933732
,23933836..23933883

Genome Context

<gbrowseImage1> name=IndicaChromosome06:23931153..23933883 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:23931153..23933883 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGACAGCTTCCGGCGATCAGTCGGCGGGTTCCGCGGCGAGGGCGTCGAAGCTGAGGTACCCGCTCCGGTCGGCGAGCCGGGGGAAGGGCGCCGCCGATGCTCCTCCGACGAGCGGCTCCGTGGCGAGGAGACCAAAACCATCTTTGGATGTCAGCAAGAGCGTTTGTGGTCTTGATCTTTCATCGGTGAAGGATAATTCAGCCAAACCTCCACGGAGGCACTCAATACAGACCAAGCCAGGTGTTAGCCCCAGGCCAACTCCTACAGGAACTATCACTCCTGTGTCATTGGTTCGTTCAAGGAGGTCCGATAGTCAAGGGAAGTTTGATACCCCGATATCAGAAGTTTCCATGTCCACAGCAAGGCGCAAGTTCAGCACTCTGTCCTCAACCTCATATTGGATGACACAAATCAGGCTTGCAGAGGCTGCTTCCAAGCACTCTATATCGTTGGGCTTCTTTAAGCTTGCACTTGAATCAGAATGCGAGCCTCTGGATCGTATGAGAGATGAGCTAAAGGCTTATGTTGTCCGGCATGGCCTTGCAACAGAGTTGGAGGAACCAGTGAAGGATATTCTTCAGGTTTACAATATCGTGGAGGATTTTGAGAAGCTAAAGATCACTGTGAACTCTTCAGAACAGCCGAAAAAGTCTGACAAGGCTGCTCATAGTGCCACCAATGTGTCACCAAAGGGTAATCTGAAGCCAAGATCGCTGAATTCTGATGCAGCTCAAAGTAAGGAAGCAGCTAAAAAAGACAACATTCAGAAGAAGCCTGATGCAAAGGTTAGAGGCTCCTACAACCGGAATCCTGCAAAAGAAGCCATCACCAAGAATACTGGTAAGAAAGCCAAGAAGCAGGTCAAGGGGCAGAAGGAAGATTGCAATGGAGGCAGCGAGGCTTTGCCAGTTGGTACAGAGCAAGAACCTGTTGATGTGGTGAAGGAGGTGACAAATGAAGATAAGGAGAATATGGGGGACAGTGAAATGCCAATGGATCTTGGCATAGCCCAAGAAATCTAG</cdnaseq>

Protein Sequence

<aaseq>MATASGDQSAGSAARASKLRYPLRSASRGKGAADAPPTSGSVARRPKPSLDVSKSVCGLDLSSVKDNSAKPPRRHSIQTKPGVSPRPTPTGTITPVSLVRSRRSDSQGKFDTPISEVSMSTARRKFSTLSSTSYWMTQIRLAEAASKHSISLGFFKLALESECEPLDRMRDELKAYVVRHGLATELEEPVKDILQVYNIVEDFEKLKITVNSSEQPKKSDKAAHSATNVSPKGNLKPRSLNSDAAQSKEAAKKDNIQKKPDAKVRGSYNRNPAKEAITKNTGKKAKKQVKGQKEDCNGGSEALPVGTEQEPVDVVKEVTNEDKENMGDSEMPMDLGIAQEI</aaseq>

Gene Sequence

<dnaseqindica>1..31#137..239#1545..1902#1983..2424#2537..2580#2684..2731#ATGGCGACAGCTTCCGGCGATCAGTCGGCGGGTATTGGATTTTTTTTTTTTTCTGTTTGTTTGATTGATTGGGGTTTAGGCGGGAGATGCGTGTGGTTTGGTCGGTGGGTGTGATGTGCCGGTTTTGGTCGTGCAGGTTCCGCGGCGAGGGCGTCGAAGCTGAGGTACCCGCTCCGGTCGGCGAGCCGGGGGAAGGGCGCCGCCGATGCTCCTCCGACGAGCGGCTCCGTGGCGAGGAGGTCTGTCTCTCCTATTCGAAGCTGCAATTTCTATATGCGAGTGAAATCTGGCATGTTGGTTTGTGGAATATACTTTTGTCGGTTGGAATTTTCAGTGATTTGCCTTCGCTTATTTAGTTACAAGGACATGTTAGATGCCGGCGTTTATCACGAGAAGTTCTCATCTAATTTAAACCACATCTGCTGCGAAACTGAATTTTGCTGCTCCGGATTAGCGTTGAAATCTTTGTTTCCTACATCAACGTGTTGTGCAAATGATTTGTTTGTTTCCAGAATATGTAGCACAGACGTGTATGGCTAGCAATTAGATGGGTATTTACGTTGTCAAGTGGCTGATTGATCTGAAAATAGTTTGGTAAACGAAACATATTTATTGCAAGAACAACAAAGTATCGAATGGAGTGTACTGTGTACATGAATCTTATAGGACTTTATGTCATACTGTTCATGCTGCAGACCTGCAAATCAGTTGCCATGTGAAAAAAAAAAGAAGTTGGTGCCATCTACAGAGGTTGTGCACCAACCAGCTCACTCCGGTTCTTTACTTTTAGTAATATCAAGCAAGGACTTTACTACTAATATCAATATTGGATACTACATAAATCTGATTTGTGAGTTGCACTCACTGTCAAAGAAGTAAAACATGCAAAACAAGAACAAATGTCACAAAAACTTTCTAAGGACTTGTCAACCCACTTGCCATAGTGTAATGCAAGTTTTGTTTGTTAAGAGGCTGGTAGACCGATGCTCTATATTGAAAGTGCATGTAAACAAGCTGATTTAGAAAGGTTAACCAATAGAGTTTCTGTATTACTTCTTGTTGAACCATCTATGGAGTATGATTAGTCCAAATAATAAAATACTCCTAAGTACATCAAAACTCAGCGTATTCATAAGGACATGGGCATAATATTTTTGAATTCAAAACAAAGTAAACAAAAACCATCTTGACTTGAATTCAGGGTCTGCTCTTCATTTCTTAAGTTCTATAATACTGGTCGTTAGGTCATATCATCTTTGTGTTTACATCTCAGATAGGATTTGGTAGTCCTAACTAGTTTGTTCCAGAGGTTAAGAGGTTTAGCTATCACAAGGCTGCATTATCTCAATATTTCTGCAAGCTTATGGGAAAACAATAGGCCAGCATACACATGTGTATTACTTAGAAACTAAGCATCTCATGGTTTGGTGCTATGTCAAGCAAAATAGACTAGCAACTTAATGCCTCTTACTTAGATGCCAACTATAAAATTTGCTGGATACTAGCTCTGTCTTTGATACCATTTGTAGTTTTATTCCTTGCAGACCAAAACCATCTTTGGATGTCAGCAAGAGCGTTTGTGGTCTTGATCTTTCATCGGTGAAGGATAATTCAGCCAAACCTCCACGGAGGCACTCAATACAGACCAAGCCAGGTGTTAGCCCCAGGCCAACTCCTACAGGAACTATCACTCCTGTGTCATTGGTTCGTTCAAGGAGGTCCGATAGTCAAGGGAAGTTTGATACCCCGATATCAGAAGTTTCCATGTCCACAGCAAGGCGCAAGTTCAGCACTCTGTCCTCAACCTCATATTGGATGACACAAATCAGGCTTGCAGAGGCTGCTTCCAAGCACTCTATATCGTTGGGCTTCTTTAAGCTTGCACTTGAATCAGAATGCGAGGTGAGCATCAAGTGATCATTTATGAGCAGTTCAGTTTCTTTCATTGATCATCATATTATAATAAGTGTGCTTTTCCACAGCCTCTGGATCGTATGAGAGATGAGCTAAAGGCTTATGTTGTCCGGCATGGCCTTGCAACAGAGTTGGAGGAACCAGTGAAGGATATTCTTCAGGTTTACAATATCGTGGAGGATTTTGAGAAGCTAAAGATCACTGTGAACTCTTCAGAACAGCCGAAAAAGTCTGACAAGGCTGCTCATAGTGCCACCAATGTGTCACCAAAGGGTAATCTGAAGCCAAGATCGCTGAATTCTGATGCAGCTCAAAGTAAGGAAGCAGCTAAAAAAGACAACATTCAGAAGAAGCCTGATGCAAAGGTTAGAGGCTCCTACAACCGGAATCCTGCAAAAGAAGCCATCACCAAGAATACTGGTAAGAAAGCCAAGAAGCAGGTCAAGGGGCAGAAGGAAGATTGCAATGGAGGCAGCGAGGCTTTGCCAGTTGGTACAGAGCAAGAACCTGGTAAGTGCCATCATGTATTTCAGATATTGTAATTATCAGTATATCACACCTGTTATAACTCCACAATTACTGAATTGTTGTCAATCGTTGGTGTGGTGAATTTATATTTCAGTTGATGTGGTGAAGGAGGTGACAAATGAAGATAAGGAGAATATGGTAAGGGTGGCAATGATGTAACAACAATTGAGATAAACAATACATTTTCTGGAAAATCTCATTATATTTCTTGTCTTGCTAATCAGTTCATTTGTACTTGTAGGGGGACAGTGAAATGCCAATGGATCTTGGCATAGCCCAAGAAATCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA023171