BGIOSGA023186

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Revision as of 13:29, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA023186| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA023186, complete gene.| tag = OsI_235...")
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Gene Name

BGIOSGA023186

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA023186, complete gene.

LocusTag

OsI_23559

Ensembl Transcript ID

BGIOSGA023186-TA

Ensembl Protein ID

BGIOSGA023186-PA

Length

2342

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:24151686..24154027

Sequence Coding Region

24151686..24151701,24151958..24152043,24152488..24152577,24152659..24152832,24152926..24153063
,24153233..24153370,24153472..24153533,24153754..24154027

Genome Context

<gbrowseImage1> name=IndicaChromosome06:24151686..24154027 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:24151686..24154027 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGTTCCATGAAAGTAAGACGTTCGAGACCAGGGACCCCCGCACCGGCGACGTGATCGCCCGCGTCGCCGAAGGCGACAAGGAGGACGTCGACCTGGCGGCAGGAGTACCGGATGGGGTGATCAACGTGGTGACAGGATTCGGCCCAACAGCGGGAGCTGCAATTTCATCTCACATGGATGTTGACGTGGTGGCTTTCACGGGATCTACTGAGGTTGGACGGCTTATAATGGAGGCCTCCGCGAAGAGCAACCTGAAGCCGGTGGCACTCGAGCTCGGCGGCAAGTCGCCGTTCATCGTCTTCGACGACGCCGACCTGGACAAGGCCGTCGAGCTCGCCATCGGCGGGAACTTCTTCAACAAGGGAGAAGCCTGCGTCGCCGGGAGCCGCGTGTTCGTGCAGGAGGGCATCTACGACCGGTTCGAGCAGAAGCTAGCGGACACCATGAAGAGCTGGGTCGTCGGCGACCCCTTCGATCCTCGCGTCAATCAAGGACCACAGGTGGACAAGGCTCAGTATGAGAGGGTGCTCGGGTACATCGAGCAAGGCAAGGCAGAAGGGGCAACTGTTCTCACGGGAGGGAAGCCCTGCGGTAAGAAAGGGTACTACATCGAGCCCACCATTTTCACCAATGTGAAGGACGACATGGTCATCGCGAGGGAGGAGATCTTCGGCCCCGTCATGTGCCTGATGAAGTTCAAGACGGTGGAGGAGGCGATCGAGAGGGCGAACGGGACGAGGTACGGGCTGGCGGCGGGGCTGGTGACGAGGGACATCGACGTGGCGAACCGGATGGCGAGGTCGATCCGGGCAGGGGTGGTGTGGGTGAACTGCTACTTCGCCATGGACAGGAGCTGCCCGTTCGGTGGCCGCAAGATGAGCGGGTTCGGCAAGGACGACAGCATGCACGCGCTCGACAAGTTCCTCGCCGTCAAGTCCGTCGTCACCCCCGTCCATGGCTCCCCCTGGTTCTGA</cdnaseq>

Protein Sequence

<aaseq>MEFHESKTFETRDPRTGDVIARVAEGDKEDVDLAAGVPDGVINVVTGFGPTAGAAISSHMDVDVVAFTGSTEVGRLIMEASAKSNLKPVALELGGKSPFIVFDDADLDKAVELAIGGNFFNKGEACVAGSRVFVQEGIYDRFEQKLADTMKSWVVGDPFDPRVNQGPQVDKAQYERVLGYIEQGKAEGATVLTGGKPCGKKGYYIEPTIFTNVKDDMVIAREEIFGPVMCLMKFKTVEEAIERANGTRYGLAAGLVTRDIDVANRMARSIRAGVVWVNCYFAMDRSCPFGGRKMSGFGKDDSMHALDKFLAVKSVVTPVHGSPWF</aaseq>

Gene Sequence

<dnaseqindica>1..16#273..358#803..892#974..1147#1241..1378#1548..1685#1787..1848#2069..2342#ATGGAGTTCCATGAAAGTATGATTCTTATCATCAGAAACTTTTTGTACGATGGGTCAAATTCTATAGCAGTCCAATCTAAAATTAAAGACTTCTTGCTCTTGATGAGAGTCATAAACTAAAACTAACTCTCTTCATCAAGGTTATGATACCTAGGATTTTATATAACTTTAACCATGAAATGTGAGGTTTACTGAAATTTTCACTTAATTTTATCTTTACATAATCTCATCCTGATCATGGAAGGTCGCCGTGCTCCGTGCTTCTTCTCCAGGTAAGACGTTCGAGACCAGGGACCCCCGCACCGGCGACGTGATCGCCCGCGTCGCCGAAGGCGACAAGGAGGACGTCGACCTGGCGGTGAAGGCGGCGAGGGAAGCATTCGACCACGGCGAATGCCTCGCATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTAACATTAACTAATTATTAATTATAGAAAATGACAAATAAATTTATTTATTTTTTTAAAGTACCTTTTATATAGAAAATTTTCATACAAAACATAACATTTGATAGTTTGGAAAACGTGCTAATGAAAATCAAGAAAGTAGCTAATCCAATCTTCAATTTAGAACAGGACGCAAAATTGAAAAAAGAAAAACGATATAGTAGTAGCTCTGTTCTTGCATCAGGCATTTTGTGCTGTGTGATTGCTGGTAGTCTAAAACTCTGAATATCTCTGACCTTTTCGGAATGTGATATTCAGGCAGGAGTACCGGATGGGGTGATCAACGTGGTGACAGGATTCGGCCCAACAGCGGGAGCTGCAATTTCATCTCACATGGATGTTGACGTGGTAAGATATCATACATTCAGCTGTCAATTAGCACATGAACATTGATCGGTTTCTTACAACTTTTTTTTTTTTTTTTTGCAGGTGGCTTTCACGGGATCTACTGAGGTTGGACGGCTTATAATGGAGGCCTCCGCGAAGAGCAACCTGAAGCCGGTGGCACTCGAGCTCGGCGGCAAGTCGCCGTTCATCGTCTTCGACGACGCCGACCTGGACAAGGCCGTCGAGCTCGCCATCGGCGGGAACTTCTTCAACAAGGTGAGCATCCGAATTGGCAGAGCGCCATGCATTGCCGTGATCTTGATTGAATTGACTGATGAGAGCCATAGCCGTGATCTGATCAATCTGCAGGGAGAAGCCTGCGTCGCCGGGAGCCGCGTGTTCGTGCAGGAGGGCATCTACGACCGGTTCGAGCAGAAGCTAGCGGACACCATGAAGAGCTGGGTCGTCGGCGACCCCTTCGATCCTCGCGTCAATCAAGGACCACAGGTGAGTGAGTCTGAAATTAAATTCCGAAAAATCTGAATCATCATCCATTCCAACGAGCATTTTTTTTTCTTGTGAGTTCCAATAATTCAGTGATGATTCAGGCCTGATTAACTATCTGAACCAGAGACTGATCACCGTACTGTGTTGCCCTGCTACTATGTTCATACAGGTGGACAAGGCTCAGTATGAGAGGGTGCTCGGGTACATCGAGCAAGGCAAGGCAGAAGGGGCAACTGTTCTCACGGGAGGGAAGCCCTGCGGTAAGAAAGGGTACTACATCGAGCCCACCATTTTCACCAATGTGAAGGTAAAGATAAAAAATAAATTAACCTTTAGAATTTACCACGAACACACCATGTGTCTTCACAGTCTTATCTCTGATGATTCGCTTGCGATTCTGAACGACAGGACGACATGGTCATCGCGAGGGAGGAGATCTTCGGCCCCGTCATGTGCCTGATGAAGTTCAAGTAAACCCAGCTATATATATGGATCGACATCCTCTCTAGTCAAATACACGGTACCTTTATCACTAACTTGTGGATCCAGGGATCATCGGATCCATATGTAAGTGACAAAGTTACGTGATTTCGATCGCAGAGGATCTGACCATGATATGTCATATCAATTCAAAATGTTTATTATCTAAGAAACTACTATAGTGGTAAGAGAGATTAATTTTGGGTGCAGGACGGTGGAGGAGGCGATCGAGAGGGCGAACGGGACGAGGTACGGGCTGGCGGCGGGGCTGGTGACGAGGGACATCGACGTGGCGAACCGGATGGCGAGGTCGATCCGGGCAGGGGTGGTGTGGGTGAACTGCTACTTCGCCATGGACAGGAGCTGCCCGTTCGGTGGCCGCAAGATGAGCGGGTTCGGCAAGGACGACAGCATGCACGCGCTCGACAAGTTCCTCGCCGTCAAGTCCGTCGTCACCCCCGTCCATGGCTCCCCCTGGTTCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA023186