BGIOSGA023189

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Revision as of 13:29, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA023189| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA023189, complete gene.| tag = P0502H0...")
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Gene Name

BGIOSGA023189

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA023189, complete gene.

LocusTag

P0502H06.25-1

Ensembl Transcript ID

BGIOSGA023189-TA

Ensembl Protein ID

BGIOSGA023189-PA

Length

2779

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:24180027..24182805

Sequence Coding Region

24180027..24180042,24180299..24180441,24180524..24180907,24181268..24181357,24181437..24181610
,24181704..24181841,24182011..24182148,24182250..24182311,24182532..24182805

Genome Context

<gbrowseImage1> name=IndicaChromosome06:24180027..24182805 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:24180027..24182805 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGTTCCATGAAAGTAAGACGTTCGAGACCAGGGACCCCCGCACCGGCGACGTGATCGCCCGCGTCGCCGAAGGCGACAAGGAGGACGTCGACCTGGCGGTGAAGGCGGCGAGGGAAGCATTCGACCACGGCGAATGGCCTCGCATGTCGGGATCAGAGAGAGAGAGGGTCATGGCGAAGTACGCGGAGGTGGTGGAGCGGCACGCGGATGAGCTGGCGGCGCTGGAGAGCCTTGACGCCGGCAAGCCGCTCGCCGCCGCCAGGGCGGTGGACGTCGGCGAGTGCGTCGGCATCCTGCGCTACTTCGCCGGCGCCGCCGACAAGATCCACGGCGAGACGCTCAAGATGTCGAGGCAGCTCCAGGGTTACACCCTCCGCGAGCCCCTCGGCGTCGCCGGCCTCATCGTCCCCTGGAACTTCCCGGCCATCATGTTCTTCTCCAAAGTCTCACCGGCGCTCGCCGCCGGCTGCACCGTCGTCGTCAAGCCCGCCGAGCAGACGCCCCTCAGCGCCCTGTTCCTCGCCCACCTATCAAAGCAAGCAGGAGTACCGGATGGGGTGATCAACGTGGTGACAGGATTCGGCCCAACAGCGGGAGCTGCAATTTCATCTCACATGGATGTTGACGTGGTGGCTTTCACGGGATCTACTGAGGTTGGACGGCTTATAATGGAGGCCTCCGCGAAGAGCAACCTGAAGCCGGTGGCACTCGAGCTCGGCGGCAAGTCGCCGTTCATCGTCTTCGACGACGCCGACCTGGACAAGGCCGTCGAGCTCGCCATCGGCGGGAACTTCTTCAACAAGGGAGAAGCCTGCGTCGCCGGGAGCCGCGTGTTCGTGCAGGAGGGCATCTACGACCGGTTCGAGCAGAAGCTAGCGGACACCATGAAGAGCTGGGTCGTCGGCGACCCCTTCGATCCTCGCGTCAATCAAGGACCACAGGTGGACAAGGCTCAGTATGAGAGGGTGCTCGGGTACATCGAGCAAGGCAAGGCAGAAGGGGCAACTGTTCTCACGGGAGGGAAGCCCTGCGGTAAGAAAGGGTACTACATCGAGCCCACCATTTTCACCAATGTGAAGGACGACATGGTCATCGCGAGGGAGGAGATCTTCGGCCCCGTCATGTGCCTGATGAAGTTCAAGACGGTGGAGGAGGCGATCGAGAGGGCGAACGGGACGAGGTACGGGCTGGCGGCGGGGCTGGTGACGAGGGACATCGACGTGGCGAACCGGATGGCGAGGTCGATCCGGGCAGGGGTGGTGTGGGTGAACTGCTACTTCGCCATGGACAGGAGCTGCCCGTTCGGTGGCCGCAAGATGAGCGGGTTCGGCAAGGACGACAGCATGCACGCGCTCGACAAGTTCCTCGCCGTCAAGTCCGTCGTCACCCCCGTCCATGGCTCCCCCTGGTTCTGA</cdnaseq>

Protein Sequence

<aaseq>MEFHESKTFETRDPRTGDVIARVAEGDKEDVDLAVKAAREAFDHGEWPRMSGSERERVMAKYAEVVERHADELAALESLDAGKPLAAARAVDVGECVGILRYFAGAADKIHGETLKMSRQLQGYTLREPLGVAGLIVPWNFPAIMFFSKVSPALAAGCTVVVKPAEQTPLSALFLAHLSKQAGVPDGVINVVTGFGPTAGAAISSHMDVDVVAFTGSTEVGRLIMEASAKSNLKPVALELGGKSPFIVFDDADLDKAVELAIGGNFFNKGEACVAGSRVFVQEGIYDRFEQKLADTMKSWVVGDPFDPRVNQGPQVDKAQYERVLGYIEQGKAEGATVLTGGKPCGKKGYYIEPTIFTNVKDDMVIAREEIFGPVMCLMKFKTVEEAIERANGTRYGLAAGLVTRDIDVANRMARSIRAGVVWVNCYFAMDRSCPFGGRKMSGFGKDDSMHALDKFLAVKSVVTPVHGSPWF</aaseq>

Gene Sequence

<dnaseqindica>1..16#273..415#498..881#1242..1331#1411..1584#1678..1815#1985..2122#2224..2285#2506..2779#ATGGAGTTCCATGAAAGTATGATTCTTATCATCACAAACTTTTTGTACGATGGGTCAAATTCTATAGCAGTCTAATCTAAAATTAAAGACTTCTTGCTCTTGATGAGAGTCATAAACTAAAACTAACTCTCTTCATCAAGGTTATGATACCTAGGATTTTATATAACTTTAACCATGAAATGTGAGGTTTACTGAAATTTTCACTTAATTTTATCTTTACATAATCTCATCCTGATCATGGAAGGTCGCCGTGCTCCGTGCTTCTTCTCCAGGTAAGACGTTCGAGACCAGGGACCCCCGCACCGGCGACGTGATCGCCCGCGTCGCCGAAGGCGACAAGGAGGACGTCGACCTGGCGGTGAAGGCGGCGAGGGAAGCATTCGACCACGGCGAATGGCCTCGCATGTCGGGATCAGTACGGTCATCTTCTTCTTCCTCTCAATCGTGCAAAAAATGGCTGGAAAGTGACCGATCAATGGCGTATTTGTCAAATGCAGGAGAGAGAGAGGGTCATGGCGAAGTACGCGGAGGTGGTGGAGCGGCACGCGGATGAGCTGGCGGCGCTGGAGAGCCTTGACGCCGGCAAGCCGCTCGCCGCCGCCAGGGCGGTGGACGTCGGCGAGTGCGTCGGCATCCTGCGCTACTTCGCCGGCGCCGCCGACAAGATCCACGGCGAGACGCTCAAGATGTCGAGGCAGCTCCAGGGTTACACCCTCCGCGAGCCCCTCGGCGTCGCCGGCCTCATCGTCCCCTGGAACTTCCCGGCCATCATGTTCTTCTCCAAAGTCTCACCGGCGCTCGCCGCCGGCTGCACCGTCGTCGTCAAGCCCGCCGAGCAGACGCCCCTCAGCGCCCTGTTCCTCGCCCACCTATCAAAGCAAGTAAGAATTTTTTTTTAAAAAAAATAAGCAAGTAAGATTAGTCACACAAACGAGAAATATGATTAACATTAACTAATTATTAATTATAGAAAATTGACAAATAAATTTATTTATTTATTTAAAGTACCTTTTATATAGAAAATTTTCATACAAAACATAACATTTGATAGTTTGGAAAACGCGCTAATGAAAATCGAGAAAGTAGCTAATCCAATCTTCAATTTAGAACAGGACGCAAAATTGAAAAAAGAAAAACGATATAGTAGTAGCTCTGTTCTTGCATCAGGCATTTTGTGCTGTGTGATTGCTGGTAGTCTAAAACTCTGAATATCTCTGACCTTTTCGGAATGTGATATTCAGGCAGGAGTACCGGATGGGGTGATCAACGTGGTGACAGGATTCGGCCCAACAGCGGGAGCTGCAATTTCATCTCACATGGATGTTGACGTGGTAAGATATCATACATTCAGCTGTCAATTAGCACATGAACATTGATCGGTTTCTTATAACTTTTTTTTTTTTTTTGCAGGTGGCTTTCACGGGATCTACTGAGGTTGGACGGCTTATAATGGAGGCCTCCGCGAAGAGCAACCTGAAGCCGGTGGCACTCGAGCTCGGCGGCAAGTCGCCGTTCATCGTCTTCGACGACGCCGACCTGGACAAGGCCGTCGAGCTCGCCATCGGCGGGAACTTCTTCAACAAGGTGAGCATCCGAATTGGCAGAGCGCCATGCATTGCCGTGATCTTGATTGAATTGACTGATGAGAGCCATAGCCGTGATCTGATCAATCTACAGGGAGAAGCCTGCGTCGCCGGGAGCCGCGTGTTCGTGCAGGAGGGCATCTACGACCGGTTCGAGCAGAAGCTAGCGGACACCATGAAGAGCTGGGTCGTCGGCGACCCCTTCGATCCTCGCGTCAATCAAGGACCACAGGTGAGTGAGTCTGAAATTAAATTTCGAAAAATCTGAATCATCATCCATTCCAACGAGCATTTTTTTTTCTTGTGAGTTCCAATAATTCAGTGATGATTCAGGCCTGATTAACTATCTGAACCAGAGACTGATCACCGTACTGTGTTGCCCTGCTACTATGTTCATACAGGTGGACAAGGCTCAGTATGAGAGGGTGCTCGGGTACATCGAGCAAGGCAAGGCAGAAGGGGCAACTGTTCTCACGGGAGGGAAGCCCTGCGGTAAGAAAGGGTACTACATCGAGCCCACCATTTTCACCAATGTGAAGGTAAAGATAGAAAATAAATTAACCTTTAGAATTTACCACGAACACACCATGTGTCTTCACAGTCTTATCTCTGATGATTCGCTTGCGATTCTGAACGACAGGACGACATGGTCATCGCGAGGGAGGAGATCTTCGGCCCCGTCATGTGCCTGATGAAGTTCAAGTAAACCCAGCTATATATATGGATCGATATCCTCTCTAGTCAAATATACGATACCTTTATCACTAACTTGTGGATCCAGGGATCATCGGATCCACATGTAAGTGACAAAGTTACGTGACTTCGATCGCAGAGGATCTGACCATGATATGTCATATCAATTCAAAATGTTTATTATCTAAGAAACTACTATAATGGTAAGAGAGATTAATTTTGGGTGCAGGACGGTGGAGGAGGCGATCGAGAGGGCGAACGGGACGAGGTACGGGCTGGCGGCGGGGCTGGTGACGAGGGACATCGACGTGGCGAACCGGATGGCGAGGTCGATCCGGGCAGGGGTGGTGTGGGTGAACTGCTACTTCGCCATGGACAGGAGCTGCCCGTTCGGTGGCCGCAAGATGAGCGGGTTCGGCAAGGACGACAGCATGCACGCGCTCGACAAGTTCCTCGCCGTCAAGTCCGTCGTCACCCCCGTCCATGGCTCCCCCTGGTTCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA023189