Os11g0621000

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Revision as of 09:17, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0621000| Description = Protein of unknown function DUF716 family protein| Version = NM_001074829.1 GI:115486306 GeneID:4350946| Length = 37...")
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Gene Name

Os11g0621000

Description

Protein of unknown function DUF716 family protein

Version

NM_001074829.1 GI:115486306 GeneID:4350946

Length

3770 bp

Definition

Oryza sativa Japonica Group Os11g0621000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:26053363..26057132

Sequence Coding Region

26053587..26054154,26056145..26056506

Expression

GEO Profiles:Os11g0621000

Genome Context

<gbrowseImage1> name=NC_008404:26053363..26057132 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:26053363..26057132 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggtcgttcaaggggcacgtgctgccggggacgctgttcctggcggtgggggcgtggcacgtgtgggcggcggcggcgaggttcgccgccgacccgcgcgggttcaggctgcgcgcctggaaccccgtggacgtcggcggcggcggcgcgccggcgtggctccccgcccacctcgagctctacgtcattgccggcggcgccttcctcgacatgtgcgtcgaggtgctctactccacccacctccacatcttcgccgacggcggcatcaaccccgcccacctcaacgacctcgagcacggcggcatgctcctcatgttcttcctcttcggcatcctcgccctcctctcccaaaaaaccaggtacctgccgttgccggagggggcgctgtgcctggtggcgtcgacggcgttcatggcggagctcctcctcttctacttccactccaccacccaccagggcctcgagggctactaccactacctcctcgtcgtcgtcgtcgcgctctgcgtcgccaccaccgtgctcggcgccctcctccccgcgagcttccccgtcgacatcgccagcggcgccgccatcgcgctccagggcctctggttctaccagacggcgttcacgctctacgggccctcgctgccggcgggctgccgccgcgacgccgacggccacatcgactgccacacccacgccgcccaggagcgcgccgagcagctcgccaacttccagctgttcggcctcgtcttcctcgtctgcgcctacgcgctcgggtgcttcgccgtcgccgcggcgaggcacgggcaccccgacctggccacgatgcacgccaagcacgtcgccgccatggaggcgcagctcgccggcgccggcgccggcgagggggacaggttcgtcggctctgcgctgccgctggaggacaccgcgatctaa</cdnaseq>

Protein Sequence

<aaseq>MGSFKGHVLPGTLFLAVGAWHVWAAAARFAADPRGFRLRAWNPV DVGGGGAPAWLPAHLELYVIAGGAFLDMCVEVLYSTHLHIFADGGINPAHLNDLEHGG MLLMFFLFGILALLSQKTRYLPLPEGALCLVASTAFMAELLLFYFHSTTHQGLEGYYH YLLVVVVALCVATTVLGALLPASFPVDIASGAAIALQGLWFYQTAFTLYGPSLPAGCR RDADGHIDCHTHAAQERAEQLANFQLFGLVFLVCAYALGCFAVAAARHGHPDLATMHA KHVAAMEAQLAGAGAGEGDRFVGSALPLEDTAI</aaseq>

Gene Sequence

<dnaseqindica>2979..3546#627..988#gcgccctcgccaccacggcgcgtcgcgcccccgacgcgccaggtcgccgctcccgtgtcgcgccgcgccgcgcccccacggccccggtacgcgcgctcgctcgtgcgacacgccgaggccgaggagaggagacagagcaagcgacaaaacgcgcaggcgatcccagagcgcgccgcgccgcggccgtgtcgatcccatcgaacacctcctcctacaggagtctcgagggctacttgtacacacacccatactagagaaagaaacaacgagaggagatacagagattgggagaggttagcgagagaggttgggcagtagccatcatcatcatcaattcatcttctccaaaaaaaatcagagtagaatctcatcactcacgtacgtgcagcttctctctctttctccttcgcgcgcgtcgatcgctttctcgtccccatcataaagcaaatgattcgttcgcctcgccaccctgctttaattctcttcttctcctcctcctccgccgccgccgccgccgaatcttccggtagctagatcccctcgccggcgacgtgcttgcgtttcttggtgtcgtgacgatcggggcgatccattttgtttcaggtcaacgccggtgatcctctccgatggggtcgttcaaggggcacgtgctgccggggacgctgttcctggcggtgggggcgtggcacgtgtgggcggcggcggcgaggttcgccgccgacccgcgcgggttcaggctgcgcgcctggaaccccgtggacgtcggcggcggcggcgcgccggcgtggctccccgcccacctcgagctctacgtcattgccggcggcgccttcctcgacatgtgcgtcgaggtgctctactccacccacctccacatcttcgccgacggcggcatcaaccccgcccacctcaacgacctcgagcacggcggcatgctcctcatgttcttcctcttcggcatcctcgccctcctctcccaaaaaaccaggtaacctagcatgatcaatccactcttcttcccttgctcatattgatttcctaacatgatcaaattttcgtctgtttattcatgctatgatcataatattttttttcaactttttatttaatttttttaattcataatttgatcgaaatttctctatttttttttctttgtcatgatatggtcaatgttcatccttttcttgttcttatcaaagaataatccatttttctctccaattgagaacgacgaccaccaccaatccactcctcttccttgctcatcttgacttcctaatatgatcagaatttcttctttttattcataatttgataaaaaaaaatcttttgtcgtgatatgatcattattcatctatatcttgctcggatcaaattccacaacaaaaaaacaaactgtatcacgttttttcactaactcagaagccatttgcctctccaaataattgagacgctttgtgttggaataaagtgtgcgtgatcaaagatttccagagcttgattactagcagcatcttttcagttgggttcttcttgagtacatgtgggacatgaggaaaaggggttgatatgtttgttggaatagttggttggggcaggaattgtcaagcccttcccttcccccttgtggctcattgattttgactattggggtgtcgcatcctgaaaacgtcactgggacagacaatgcagaggattggctggtccagcctaagccatgtgtccattctaattctaaactctcatgctggtccaagttggcaggtgctagtttcacatcactccaaatggcacattgcaaatttgcaattctcctttttttgccaaagaacaaacaaccttttttacacactgttgtttagtttaaccttttttttttaaaaaaaaaaactcattggtgcatgaaaggagcttcatgggttcaacacccagtcagtatatattaaggtagttaggtggcaatagtttactattgagttaaataaactaattgggtgaagacatcaatggattgattcttctctgtgcccacagctttagcaagaagtcaaaattcacatggatggagcagaagtttaccggttaccactgtttcctctgatcttcctcttggagatcttcctcttctctttttatttaaccctttttgtagataaaagtgttgaggtggggtcagggagaagtgcattcctcctgcaagtgcaatttgtaaatggccaaattgaatctgactctgttttgcatttgattgttgggggggccctgttgtggtctgaatggaattcttgtgtgaccttttcacctccaatcatattgctgttttgttttatcttatccttgcagccattgttgttatcaaaaaggtagttgtgttccccccattgtaagtacagagagtgaccatcaacagtttcagtgcaatggtctagagtaaaggccccatttgcatctcagaatatctgtacaaattgaactgtttcctatgaaatttctgtgtttcaaacatgacattgagaacgagcgcctggttcaaatgcgaattgaactgtttcgtgctaaattcttacatttcaaacatggcattgacaatgtgagacattttgaatgaaagggattcactgcaaattggaacaatttctctagtttcttttttcatgaaattcctatgtactgaaaatttgcaagatttggcatctaggaaaatccgcgcaaattgaactgtttctcgtgaaattcttctgtttcaaatataacactgataaataagggcccgtctcgaatgcaagaaggaacaatttctccaagttttttttatctctaagggttgtattttctcctgctctattcaatgaaaacactctagtgctgtttttcgttcaaaaaaaaattctccaagttttttgtgaaattcctatttctgaaaaatttacagtgtttatctgaaaatttacactgttttggtgaagggtttgcaggtacctgccgttgccggagggggcgctgtgcctggtggcgtcgacggcgttcatggcggagctcctcctcttctacttccactccaccacccaccagggcctcgagggctactaccactacctcctcgtcgtcgtcgtcgcgctctgcgtcgccaccaccgtgctcggcgccctcctccccgcgagcttccccgtcgacatcgccagcggcgccgccatcgcgctccagggcctctggttctaccagacggcgttcacgctctacgggccctcgctgccggcgggctgccgccgcgacgccgacggccacatcgactgccacacccacgccgcccaggagcgcgccgagcagctcgccaacttccagctgttcggcctcgtcttcctcgtctgcgcctacgcgctcgggtgcttcgccgtcgccgcggcgaggcacgggcaccccgacctggccacgatgcacgccaagcacgtcgccgccatggaggcgcagctcgccggcgccggcgccggcgagggggacaggttcgtcggctctgcgctgccgctggaggacaccgcgatctaagtgagcgggctcgccggcgacgtcgctgtccgtcgtcgccgccgtcttcttggatttgggtataggaagaggaagtagagtgcatgtgacacgtggcaggggcagttcagagttcagaattcggaattttcagatcatgaaacgatcgaagagtaggaggctgcagattaattgggattaaccacaataggggatacaaaattcatggaaactttgatttgatc</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0621000, RefSeq:Os11g0621000