BGIOSGA023243

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Revision as of 13:29, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA023243| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA023243, complete gene.| tag = OsI_236...")
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Gene Name

BGIOSGA023243

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA023243, complete gene.

LocusTag

OsI_23655

Ensembl Transcript ID

BGIOSGA023243-TA

Ensembl Protein ID

BGIOSGA023243-PA

Length

4911

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:25253137..25258047

Sequence Coding Region

25253137..25253485,25253658..25255019,25255283..25255465,25255590..25255870,25256357..25256616
,25257060..25257228,25257799..25258047

Genome Context

<gbrowseImage1> name=IndicaChromosome06:25253137..25258047 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:25253137..25258047 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAAGCTGCAGGTGAGGGTGGTGGAGGCGCGGGGGCTCCCCGCGGTGCGCGTGGACGGGACGAGCGACCCGTTCGTGAAGCTGCAGCTCGGGAAGCGGCGGGCCAAGACGGCGGTGGCGAGGAGGACCCTGGCCCCCGCGTGGGACGAGGAGTTCAGCTTCCTCGTCGGCGACATCGCCGAGGAGCTCGTCGTGTCCGTGCTCAACGAGGACAAGTACTTCAGCAACGACCTCCTCGGGAAGGTCAGGGTGCCCCTCGCCGACGTCATGGAGACCGACGACCTCTCCCTCGGCACCGCCTGGTACCAGCTCCAGCCCAAGAGCAAGAAGTCCAAGAAGAAATCTCGCGGAGAAGTTTGCCTGTGCATATCATTGTCTACAAGAACTCATGTTTCAGAGGAATCGCAGAGTGTGAATCCTGCTTCGGATGATGCATCCAGCTCGGACAGGTCAATTGAACATAAGGATGCGGTTTTATCAACCACTAGTAGTTACATTGACCTATCAGCGTGTGCCAGCGCCATGGACCGGGCATCGCAGAGCAGCATGGAACAATTGGCAGATAGCATTGTGGATCAACCACCGCGTAGCAGCATGGAGCAATTGGCAGTTGCTGAACCTGGAGCAGCGGCTGCTGAAGGCGATGCGATGTCGAATTCATCGTCGGTGGTAGAGGTCCTCTCTCGGTATTTCTTTGGGAATAAACCTGCCGATGTCGCGCCTTCGGCTGCATCAGATGCTGAGTCGGTCGATCAGTTTCAAGAGCCAAAAGTGTGTTCTGAAGACCATGAAACCCCTGAAAGTGGCACATCATCTGAGTCAAGCCTTGATGAGCTGCTGAAAACTATGGAGTCCAAAGATCAGGGCTGTGAAATGCCAGCGAACTTGCCTGGGGGTGTACTAATTGACGAATCTTATGTTGCTGCACCAACTGAATTGAATTCCCTCTTGTTCTCTAAAAATTCAGATTTCTGGCCAGCAGTATCTGAGCTTCAAGGAACAAGTGGGTTTCAGATTGAACCATGGAAGCTTGATAATAACGAAACTTGTTTGCAAAGAACATTGACCTACACCAAAGCTGCGAGTAAATTAGTTAAAGCTGTGAAAGCCACAGAAGAGCAGAAATACTTGAAAGCGGCTGGGAATTCTTTCGCTGTTCATTCTGTTGTTAGTACCCCTGATGTTCCTTGTGGCGGTTGTTTCAAGATAGAGATATTGTATTGTATAACACCAGGTCCCTCGTTATCATCTGAAGAACAAACATCACATCTCACTGTAAGCTGGCGGGTGAACTTTGTTCAGAGCACTATGATGAAAGGAATGATTGAAAGTGGTGCAAAACAAGGAATGGCGGAAGGCTTTGCGCATTTTTCTGAAATACTCTCCCAGAAGATTAAAGTAGCTGAGGCTGATGATGCTAATTCCAACAAAGAAAAGATTTTATCTTCACTGCATGCTCAGAAAGAATCAGGCTGGAGACTGATTGTCCGCTTTCTTTTCAACTTCACGTTCATTTTTTCAGTTATCATAGCATCGTATGTCATAGCACACCTTCACTTGTCAAAGCCCAATGCAATGCATGGGCTGGAATATTTTGGCATTGACCTTCCAGATTCAATTGGAGAGGTTGTGGTTTGTGCTGTTTTGATCCTTCAGGGACAGAATATCTTCAATATAATAAAGCGCTTCTTAAATGCATGGAAACAAAAAGGTAGTGATCATGGGGTCAAAGCTCATGGTGATGGTTGGTTGATGACTGTTGCACTTATTGAGGGCACTGGTATCACTAATTCTAATTCAAAAGAATTATTTGATATGTATGCCGTTTTTACCTGCAACGCAAAGAGGAAAACAAGCTCAGTAAAATTCCAAACATCAGAGCCAAAATGGAATGAGATATATGAATTTGATGCAATGGATGATCCTCCATCAAGAATGGATGTGGCTATTCATGACGCTAATGGGCCATTTGATCAATCCCCCATTGGTCACGCTGAAGTGAACTTTCTGAAAAGCAATTTATCAGATTTAACCGACGTATGGCTTCCTCTCGAGGGAAAGTGCGATCAAACTAGCAACCCTAAGATACACTTGAGAATATTTTTAAATAACTCGAGAGGAACTGAAGTTGTTATGAACTACCTGGCAAAGATGCGGAAAGAAGTTGGCAAGAAGGGGCGCCTCTTCTTTTCACCAAGAATTATTGGATTTTATTCCAACATATTTGGTCACAAGACCAAGTTTTTCTTTTTGTGGGATGATGTTGACGATATCCAAGTTATCCCTCCCACCCTGTCAATTGGTAGCCCATCCTTGACGATCATCCTCCGAAAGGGTAGAGGTTTAGAAGCAAAACATGGTGCCAAGGGAACAGATCCTAATGGAAGACTCAAATACTATTTTCAGTCCTTTGTTTCATTCAATGATGCCCATAGAATAATCATGGCAATTTGGAAAATGCGATCACTGAGTCCAGAACAGCAGGGGGATATGATTGAAAAAGAGTCCGATACCAAAGAACTCCAGCTCGAAGAAGGTGGAACCTTATTTACCCATGAAGATGTCAAAATGTCTGAAATATTCTCATCGGCCCTCTCTGTTGATGTTCAGATGAAGTACACTGTGGTGAATGTACCGTCAAAACCGAACACTTGCAGTGTGCAGGTTTTGTTGGGGATAGCCTGGTTAAAGAGCACTAAGCAACAAAAGAAGATCACGAAGAGTGTCATTTCCAATTCATCCATTAGATTGAAGGAGCTCTTTGCTGAAGTAGAGAAGGATCTTACATCGAGAAGCGGTAGTATTTTCAACCCAGATTTGGAACTGAACCCATACTATTGCTTAATGTTTTAG</cdnaseq>

Protein Sequence

<aaseq>MKLQVRVVEARGLPAVRVDGTSDPFVKLQLGKRRAKTAVARRTLAPAWDEEFSFLVGDIAEELVVSVLNEDKYFSNDLLGKVRVPLADVMETDDLSLGTAWYQLQPKSKKSKKKSRGEVCLCISLSTRTHVSEESQSVNPASDDASSSDRSIEHKDAVLSTTSSYIDLSACASAMDRASQSSMEQLADSIVDQPPRSSMEQLAVAEPGAAAAEGDAMSNSSSVVEVLSRYFFGNKPADVAPSAASDAESVDQFQEPKVCSEDHETPESGTSSESSLDELLKTMESKDQGCEMPANLPGGVLIDESYVAAPTELNSLLFSKNSDFWPAVSELQGTSGFQIEPWKLDNNETCLQRTLTYTKAASKLVKAVKATEEQKYLKAAGNSFAVHSVVSTPDVPCGGCFKIEILYCITPGPSLSSEEQTSHLTVSWRVNFVQSTMMKGMIESGAKQGMAEGFAHFSEILSQKIKVAEADDANSNKEKILSSLHAQKESGWRLIVRFLFNFTFIFSVIIASYVIAHLHLSKPNAMHGLEYFGIDLPDSIGEVVVCAVLILQGQNIFNIIKRFLNAWKQKGSDHGVKAHGDGWLMTVALIEGTGITNSNSKELFDMYAVFTCNAKRKTSSVKFQTSEPKWNEIYEFDAMDDPPSRMDVAIHDANGPFDQSPIGHAEVNFLKSNLSDLTDVWLPLEGKCDQTSNPKIHLRIFLNNSRGTEVVMNYLAKMRKEVGKKGRLFFSPRIIGFYSNIFGHKTKFFFLWDDVDDIQVIPPTLSIGSPSLTIILRKGRGLEAKHGAKGTDPNGRLKYYFQSFVSFNDAHRIIMAIWKMRSLSPEQQGDMIEKESDTKELQLEEGGTLFTHEDVKMSEIFSSALSVDVQMKYTVVNVPSKPNTCSVQVLLGIAWLKSTKQQKKITKSVISNSSIRLKELFAEVEKDLTSRSGSIFNPDLELNPYYCLMF</aaseq>

Gene Sequence

<dnaseqindica>1..349#522..1883#2147..2329#2454..2734#3221..3480#3924..4092#4663..4911#ATGAAGCTGCAGGTGAGGGTGGTGGAGGCGCGGGGGCTCCCCGCGGTGCGCGTGGACGGGACGAGCGACCCGTTCGTGAAGCTGCAGCTCGGGAAGCGGCGGGCCAAGACGGCGGTGGCGAGGAGGACCCTGGCCCCCGCGTGGGACGAGGAGTTCAGCTTCCTCGTCGGCGACATCGCCGAGGAGCTCGTCGTGTCCGTGCTCAACGAGGACAAGTACTTCAGCAACGACCTCCTCGGGAAGGTCAGGGTGCCCCTCGCCGACGTCATGGAGACCGACGACCTCTCCCTCGGCACCGCCTGGTACCAGCTCCAGCCCAAGAGCAAGAAGTCCAAGAAGAAATCTCGCGGTATCGATTCACTTCTTCCATTCCCAAATTGCAAATCTGCGGCCTGTTCATTTGCAAATCTTGTCGAATTTTTGTGTAACAAACTGCATGTAGAAAGCAATCATATGTAAGTACATCTCAATTATTGATTCTGAGAGGTAATGCTCTTTATTTTATTTTTTTTCAATTGCAGGAGAAGTTTGCCTGTGCATATCATTGTCTACAAGAACTCATGTTTCAGAGGAATCGCAGAGTGTGAATCCTGCTTCGGATGATGCATCCAGCTCGGACAGGTCAATTGAACATAAGGATGCGGTTTTATCAACCACTAGTAGTTACATTGACCTATCAGCGTGTGCCAGCGCCATGGACCGGGCATCGCAGAGCAGCATGGAACAATTGGCAGATAGCATTGTGGATCAACCACCGCGTAGCAGCATGGAGCAATTGGCAGTTGCTGAACCTGGAGCAGCGGCTGCTGAAGGCGATGCGATGTCGAATTCATCGTCGGTGGTAGAGGTCCTCTCTCGGTATTTCTTTGGGAATAAACCTGCCGATGTCGCGCCTTCGGCTGCATCAGATGCTGAGTCGGTCGATCAGTTTCAAGAGCCAAAAGTGTGTTCTGAAGACCATGAAACCCCTGAAAGTGGCACATCATCTGAGTCAAGCCTTGATGAGCTGCTGAAAACTATGGAGTCCAAAGATCAGGGCTGTGAAATGCCAGCGAACTTGCCTGGGGGTGTACTAATTGACGAATCTTATGTTGCTGCACCAACTGAATTGAATTCCCTCTTGTTCTCTAAAAATTCAGATTTCTGGCCAGCAGTATCTGAGCTTCAAGGAACAAGTGGGTTTCAGATTGAACCATGGAAGCTTGATAATAACGAAACTTGTTTGCAAAGAACATTGACCTACACCAAAGCTGCGAGTAAATTAGTTAAAGCTGTGAAAGCCACAGAAGAGCAGAAATACTTGAAAGCGGCTGGGAATTCTTTCGCTGTTCATTCTGTTGTTAGTACCCCTGATGTTCCTTGTGGCGGTTGTTTCAAGATAGAGATATTGTATTGTATAACACCAGGTCCCTCGTTATCATCTGAAGAACAAACATCACATCTCACTGTAAGCTGGCGGGTGAACTTTGTTCAGAGCACTATGATGAAAGGAATGATTGAAAGTGGTGCAAAACAAGGAATGGCGGAAGGCTTTGCGCATTTTTCTGAAATACTCTCCCAGAAGATTAAAGTAGCTGAGGCTGATGATGCTAATTCCAACAAAGAAAAGATTTTATCTTCACTGCATGCTCAGAAAGAATCAGGCTGGAGACTGATTGTCCGCTTTCTTTTCAACTTCACGTTCATTTTTTCAGTTATCATAGCATCGTATGTCATAGCACACCTTCACTTGTCAAAGCCCAATGCAATGCATGGGCTGGAATATTTTGGCATTGACCTTCCAGATTCAATTGGAGAGGTTGTGGTTTGTGCTGTTTTGATCCTTCAGGGACAGAATATCTTCAATATAATAAAGCGCTTCTTAAATGCATGGAAACAAAAAGGTACCTTATCTCAGAGTTACCACTGTTCTTTACCCCGAAATTGGTAAATTAATATGCACCACTAAAAATGATTTTGCAATATGTATTATATATGTTGTATGCTGTATGACTCAATACACGTCTCTCAAAAGGAGATGCGATGAATGATTTTCTATTGCACCTAGTGAAAACTTGCATCTGTTTTAATATTGTACTGCTACTTTATATTTTCTCCTTACAGTTTCAGATGGGATTAAGTTAATTAACTTTTTTCTATGTATCAGGTAGTGATCATGGGGTCAAAGCTCATGGTGATGGTTGGTTGATGACTGTTGCACTTATTGAGGGCACTGGTATCACTAATTCTAATTCAAAAGAATTATTTGATATGTATGCCGTTTTTACCTGCAACGCAAAGAGGAAAACAAGCTCAGTAAAATTCCAAACATCAGAGCCAAAATGGAATGGTTAGCTTCTTTCCCTGCTGTCATGTTTCTTTTTCCTCATCTGTGAAGAGCTAGAGATTCACTATCCCAGTAGTACAGTCCTAAATGGACTGGCCCCTGACTCATTTGATGTCTGAATTTCTAGAGATATATGAATTTGATGCAATGGATGATCCTCCATCAAGAATGGATGTGGCTATTCATGACGCTAATGGGCCATTTGATCAATCCCCCATTGGTCACGCTGAAGTGAACTTTCTGAAAAGCAATTTATCAGATTTAACCGACGTATGGCTTCCTCTCGAGGGAAAGTGCGATCAAACTAGCAACCCTAAGATACACTTGAGAATATTTTTAAATAACTCGAGAGGAACTGAAGTTGTTATGAACTACCTGGCAAAGATGCGGAAAGAAGTTGGCAAGAAGGTATCGAATTGAGCAGCTCTTTTGTTGGCCTTTTTCGCCATCACTTGTTCTATTTCTATAATGACAGAACAAATCATGCAGATAAATTTGCGGTCTGCCCAAACAAATGCAGCATTTCGGAAACTCTTTAACCTCCCACCGGAAGAGTTTCTCATCGATGATTTTACCTGCCATCTAAAACGAAAGATGCCACTTCAGGTTGGGCTTTCCTACTCTAGCAATTCTTTTAAAGAGAACAAAAATTTCCGAATGCTTCTTTTCATGTGTGCAGTTTGCTATTATTGAGCTTTCATACATAGTGTATTCATAATATGCATATTGTCTAGCATAATAGCCATAGGACTTAGACATTACAAGAAAGAGGACTAGTACAATTTTGTACATCGAGGATTTATAGTGTTGATTGGTTTTTGAAATTTGACTTTATTTGTATGTCAACCATTTTTCTGTCAAAGTTTGAGAATATTGAGATCCTTACTTTTACAGGGGCGCCTCTTCTTTTCACCAAGAATTATTGGATTTTATTCCAACATATTTGGTCACAAGACCAAGTTTTTCTTTTTGTGGGATGATGTTGACGATATCCAAGTTATCCCTCCCACCCTGTCAATTGGTAGCCCATCCTTGACGATCATCCTCCGAAAGGGTAGAGGTTTAGAAGCAAAACATGGTGCCAAGGGAACAGATCCTAATGGAAGACTCAAATACTATTTTCAGTCCTTTGTTTCATTCAATGATGCCCATAGGTAATTTACATTTGTTTCTCTTTCTAAAGTTTAACAGGACATCTTGTACAGGGATATGCTTTATTGTTTAAATCTTGTCTTTAGCTCCAGATTAATATGTTCACAGGCAGCCGAGCCTGATAAATTGGGTCTGGCTGGACTGAGGCTTTGAGTTTTCTAATCCACAAGACTGATACCTGCCTGGCCTGAAAAAGAAAAGTTAAATATGAATTTATGGGGAGTATTTTTCAGGCTTCATGTGGTAGTGAAGGTTGTAGGGAGGCACCAGACTCAGATCTAGAAGATAGGCAGTCTTTTCTTACACTTTTTGGGAAGCCTGACAATAAGTCATATTATGCACGAACCTACAAATAAGCAACGTTGTAAAACTGATTTTTTTTTATTACACAACTAGCAAGCAGGCTCCTAATTTGGATTAATTTTGTTCCATTTTTTCCTGACAGAATAATCATGGCAATTTGGAAAATGCGATCACTGAGTCCAGAACAGCAGGGGGATATGATTGAAAAAGAGTCCGATACCAAAGAACTCCAGCTCGAAGAAGGTGGAACCTTATTTACCCATGAAGATGTCAAAATGTCTGAAATATTCTCATCGGCCCTCTCTGTTGATGTGAGTGTTTTTACCTTTGCAAGCTCATGCTTGAGCTTGACACGATGCGTTTTCGCAACATATAATCTCTTTTGAGCTCCCTACGAATGAATGTTTGCATTTACAGGTCGAGTCCCTGATGGGGATGTTTTCAGGAGGGCCTTTGGAACACAGAATGATGCATATAGCTGGTTGTATTGACTACTCGCCATACTAGTTAGTGGGTAACTTGTATAGCCGATTATATATACCAGCGCTAATATCAGCTACAGTTTTACTTATACTTGTCAAGATATGGTAGGAGTAGCAACCTACCACTCATCAGAGGTATGCCNTAGTGAACCAAGAAGGCTGGGCCATTGAAGAGGTGAAGAGCCTACAAGGTGTTCTACTGGGGGACTGCTTCAATGTAAGATGTCCCTTCATGCATCTCGTACTCTGCGTTGTAATTTTTTAAATCAAAAATTATCAAGATTCTGAAGCTATGGTGTTGGAAATATAATATGAGTTAGACATCACCAGCTTGTGTTTTCTTTGAATTGTTCTTGCTTAACTAGCCCTTAACAAATATCAATGATTCTTAATTTGCAGGTTCAGATGAAGTACACTGTGGTGAATGTACCGTCAAAACCGAACACTTGCAGTGTGCAGGTTTTGTTGGGGATAGCCTGGTTAAAGAGCACTAAGCAACAAAAGAAGATCACGAAGAGTGTCATTTCCAATTCATCCATTAGATTGAAGGAGCTCTTTGCTGAAGTAGAGAAGGATCTTACATCGAGAAGCGGTAGTATTTTCAACCCAGATTTGGAACTGAACCCATACTATTGCTTAATGTTTTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA023243