BGIOSGA023252

From RiceWiki
Revision as of 13:29, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA023252| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA023252, complete gene.| tag = P0490F0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA023252

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA023252, complete gene.

LocusTag

P0490F09.11

Ensembl Transcript ID

BGIOSGA023252-TA

Ensembl Protein ID

BGIOSGA023252-PA

Length

4477

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:25353560..25358036

Sequence Coding Region

25353560..25354174,25355196..25355231,25355368..25355532,25356226..25356315,25356397..25356495
,25356794..25356898,25356996..25357136,25357219..25357506,25357746..25358036

Genome Context

<gbrowseImage1> name=IndicaChromosome06:25353560..25358036 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:25353560..25358036 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCGGCGGCGGTGGGGGCGTACCGGTCGGCGGGGAGGAGGAGGGACGCCTTCGCGGCGGCGGCGGAGGACGCCGGCTCCGCCACCACGCGCGGGCGGGCCGCGGCCGCCGGGGGAAGCGGCGGGCTGCTCCGGCGGTCGAGGAGCCTGAGTAGGTTCCCGCCGCCATCGCCCTCCCCGGAGGACGCGGCCACGCCCTCCTCGAGGTTCGTCAACAAGGTCAGGGGCGGCGGCCGGGGCGGAGCGGGGTTGCCGCCGGAGATCAGCCTCGATGACCTCGCCGACGAGTTCTTCCGGGCCAGGGCGGAGTCCGAGGACGACGACGACGACGAGGAGGCGGTGGTGGTCGTGCGCGGGGAGGAGTCGCGTGGGCGGCTCAGGTTCCCGGCGCCAGCGGAGAAGGGCGGCGGTCGGCGGAGCTCCACCGCGCGGTACGCCAGGGAGACGGAGTCGTCGCGGCAGCGCGGGAGGTCGGTGTCGCGGCCGCCGGCCGAGAGGCGAGGCGGAGCCACTGCTGTCGCCAATGGCGGGGCTGCTGCCGCGGGGCGGCAGCGGTATGCATCCGTCGACCGGCGCGCTTCGATGGATCGGCACCGATGGTGTGATTCGGATTGGTCTGTGAATCCCACTAGTACCTTTGTTTTTAAGAATGATATGGACATTTCTCACCGGTATGGTTCTAGGGGAATAAATACCAAATCCAGCAATAATAGCCTGCAGAACTCATCATTCCATAAGACGGCTAAAGTAAATCAATCGTTGAGGAAGTCTACAAGTCAAAAAGATTTCTTACATTCACGAGACAGCAGCTCAAGCCATTCTTCAATAACTGATGATGAATTTCGGGACTCTTTTCATAGCAGAAATCAGAAGGGGATTCGGGCAGTTTATACCCTTGAAAAGGACCGCCTGAGTAATAATGAGGATGAAAATGCACTGTATGACGTGATGCGTAAAGAAGTCCGGCAAGCTGTTGATGAAATCAGGACTCAGCTTGAAAAGGTCGTGACAAAATCTGAACCTTCAGAAAAAGCAACAAGCGCTGATGCACAACCAACTCAGGTTATTAATGAGCTCCGCAGGAGTTACACTAGCAAGTTGGAAGAGTCAGAGATGCGGAAACAGGAATTGTTAGCTCAATTGGCAGCGGAAGAACAACGTGGGCATGAACTCACAAAAATAGTCAAGGAATTGCTACCTACTCCTAAGAAGAATATGAATTCGGAAAGGCAACCACGATATAGAAGAAGAAGCAATGATAGAGCCAGGGTGTCAAGACGTCTTACTGAAGAGGCTGAGCAATACTTCGAAGATTTCCTGTCAAATGTTGAAGATACTGATTTTTCATCTTTTGATGGAGAAAGAAGTGATACAAGTTCAAGCAGAAGAGATGTGGTACAAAACACCAAGATCGAAACTCCAATAACGCTTCCAAAAGTTGCTTCACCCGTCGAGGCAGACGGGGTTGTCCTTCCCTGGCTGCAATGGGAAACAAGCAACGACCTTCAAACCTCTCCATGCAAACCAAAGACACAGGGAGCAAGTACCGCATGCAGCACCAGCAGTCGCACTATGAGCAGCCGCGGGAGTTGGAGTCCTGGAGATCATGATAGCGCAGCTGGCTCCAAGGATACACTTCTGACAAGGTTCGAGGAGGCTGCGTCTCGCCGAAGCAGCTGCCCCGATAACACTCAAAGATCGTCATTTCACATCGATGACTACATGCATTTGCGGAGGAGCCACGATCTTCTCTTGGAGCGATGGAGGCAAAAGGAAAGAATTGGCGACGGTGGCCTTATCCTGTGCAGTAGATCATCAATAATGTAG</cdnaseq>

Protein Sequence

<aaseq>MAAAAVGAYRSAGRRRDAFAAAAEDAGSATTRGRAAAAGGSGGLLRRSRSLSRFPPPSPSPEDAATPSSRFVNKVRGGGRGGAGLPPEISLDDLADEFFRARAESEDDDDDEEAVVVVRGEESRGRLRFPAPAEKGGGRRSSTARYARETESSRQRGRSVSRPPAERRGGATAVANGGAAAAGRQRYASVDRRASMDRHRWCDSDWSVNPTSTFVFKNDMDISHRYGSRGINTKSSNNSLQNSSFHKTAKVNQSLRKSTSQKDFLHSRDSSSSHSSITDDEFRDSFHSRNQKGIRAVYTLEKDRLSNNEDENALYDVMRKEVRQAVDEIRTQLEKVVTKSEPSEKATSADAQPTQVINELRRSYTSKLEESEMRKQELLAQLAAEEQRGHELTKIVKELLPTPKKNMNSERQPRYRRRSNDRARVSRRLTEEAEQYFEDFLSNVEDTDFSSFDGERSDTSSSRRDVVQNTKIETPITLPKVASPVEADGVVLPWLQWETSNDLQTSPCKPKTQGASTACSTSSRTMSSRGSWSPGDHDSAAGSKDTLLTRFEEAASRRSSCPDNTQRSSFHIDDYMHLRRSHDLLLERWRQKERIGDGGLILCSRSSIM</aaseq>

Gene Sequence

<dnaseqindica>1..615#1637..1672#1809..1973#2667..2756#2838..2936#3235..3339#3437..3577#3660..3947#4187..4477#ATGGCGGCGGCGGCGGTGGGGGCGTACCGGTCGGCGGGGAGGAGGAGGGACGCCTTCGCGGCGGCGGCGGAGGACGCCGGCTCCGCCACCACGCGCGGGCGGGCCGCGGCCGCCGGGGGAAGCGGCGGGCTGCTCCGGCGGTCGAGGAGCCTGAGTAGGTTCCCGCCGCCATCGCCCTCCCCGGAGGACGCGGCCACGCCCTCCTCGAGGTTCGTCAACAAGGTCAGGGGCGGCGGCCGGGGCGGAGCGGGGTTGCCGCCGGAGATCAGCCTCGATGACCTCGCCGACGAGTTCTTCCGGGCCAGGGCGGAGTCCGAGGACGACGACGACGACGAGGAGGCGGTGGTGGTCGTGCGCGGGGAGGAGTCGCGTGGGCGGCTCAGGTTCCCGGCGCCAGCGGAGAAGGGCGGCGGTCGGCGGAGCTCCACCGCGCGGTACGCCAGGGAGACGGAGTCGTCGCGGCAGCGCGGGAGGTCGGTGTCGCGGCCGCCGGCCGAGAGGCGAGGCGGAGCCACTGCTGTCGCCAATGGCGGGGCTGCTGCCGCGGGGCGGCAGCGGTATGCATCCGTCGACCGGCGCGCTTCGATGGATCGGCACCGATGGTGTGATTCGGATGTAAGTGTGACCAGCATTTCACAATCTAACTCGCAATTTTTAGTTGTAATAATAATAATAGTGGTGTTCGGTTTTGTATAGGAGTTGATTGCATTATGCCGAGTTAATTTCATTGGGATTAGCGGATTGCGTGTGATATGCTTTGGATTTGCTGTCATATATTGTCATAAATTTTTTAGTTAGTCCTATCGGGCATTTTAGAAATAAATTTGTATTAGCAATGAATGCAAAATCTCGCTACGATTCTATTTAACGATATTAGACTTGTTTAATTGTTCATTGTGCTATGTTTAAAATCTGTTTGGAAATTTGATACATGCTTCATGCCTGTAATTCATGTACCTCTACTGGTTGCTAAGTTTATATGGTATTATTCATGCTTGTTCATGAAACGTGAATTAGTTCAATTTATGGATGTGTTGAGTTGAGATTATAAGAATAATAAAATCAAGCAACTAGGTAATACAACAAAAATATACACAATGCTTTCATATGTTTTTGTATGACACGTATCCGTTCAGTTTGTTGGTCCTGGATGATGTTTGTTATCTATGCGATATTTGCTTGACTGTATAAAAATGTGTTAGATCACTTGTTTCTTGCTACACACACCATAGTAGACTGCCGTAATCGACAAGAGGATCTTATATCGCATTGTCTGTGATGGGGTAGTATTCTTGTCCTCAAAAGCACAAATGGACCTGCTTTTCTGCTTTTCAACTGGAACATTGATCTTGATGACCATAGGTAGTTTTACCTCATCAGCTTGCATTCAATAGCTATCATATTTGATTATTTGTTTATTCAATAATAACTATCATAAATGTAATGCTATCTATAGCTTCAACACATCATGATTTTACCCAACAGTATGGGAGTGCTTGGATGCATAAATAGATGATTGTAATTGTTCACTTATATATAATGTTAGCCAATGTACCATTTAATATTTATGGTACCACATTATCTTTAATCTTCATCAGAAAATTAGGTGAACTATTTCCTTATTTTTGCTTTGCAGTGGTCTGTGAATCCCACTAGTACCTTTGTTTTTAAGGTTTGGCATCCTAGATTTCGTATTTCCTTTTGTTTGCTATCGTGTAACTTATATGCCTTCACTTCATTGCTACTAGTTGTCTAGTATGTGCAATTCTACTTCTGTTTAAATCTGTGCTTTATGTTTATGACTGCAGAATGATATGGACATTTCTCACCGGTATGGTTCTAGGGGAATAAATACCAAATCCAGCAATAATAGCCTGCAGAACTCATCATTCCATAAGACGGCTAAAGTAAATCAATCGTTGAGGAAGTCTACAAGTCAAAAAGATTTCTTACATTCACGAGACAGCAGCTCAGTGAGTACATCACATATTATTCTTTTGCCTGCTGCTATTGTGATGACTTAAGAAATTCTGCTTTCTAAGGATGCAGAAAATGGAATAGTTATTTGGGTGGTTCCCCTTGCATGTGAAAATAGCAATATAATTGTGACATGTTCCATGTGATGCAAACCATAGTGCATAATGTAGCTGTTTGTGCCACAGTGCAACCTGTTGCTTGGTGCTTAATGATATCTGGGACTGGGAGTGACTGCATTACTCACTTGCATCCCTGGGCCATCACCTCCCTTGCTGCCTTATATGCCCCAAACCGTAATTTGGTGAGCCCAGACCCTAAACCTATGCCTCCATAACTCCATTGCTAGAGCAGAGAACCACAGTGACTTTAGCATGAATCATCAAGCCTCATCCAATTTGAAGTAATTTTCATTAAATCACAAGAAAGAGTTGACTGCTGTATATCATTAAACCTTTTGCCTTACCCTGTGCTTTAGTGCCGTCAGTTGCTTGGCCTGAGCACGAGTTGTCAAGCCACATCTAATTCTAATTTTAAGTAATTTGATTAAAATCACAAGAAAGAGTTGAGTGCTGTACACCATTAAAATTTTTGCGCTATCTTGTGCCTTAGTGCCATCCATTGGTTCGTGCATAAAAGTTCTGGCTCTTCCATGTGTCATTGTGAGCTCATCTTAACCTTGATTTTTGCAGAGCCATTCTTCAATAACTGATGATGAATTTCGGGACTCTTTTCATAGCAGAAATCAGAAGGGGATTCGGGCAGTTTATACCCTTGAAAAGGTTGATCTCACTATATTCTTTTAAATTTTTAGAACTAGAATATATCAGATATCCCTTTTATATGCTTATGGCATTTGATAGGACCGCCTGAGTAATAATGAGGATGAAAATGCACTGTATGACGTGATGCGTAAAGAAGTCCGGCAAGCTGTTGATGAAATCAGGACTCAGCTTGAAAAGGTAACTTATGAGCAGCAAAAGTTCCTAATGACATTCACCGTATATTCCTTTGATTAGTTTCCTTGGTCTGTGATAATTTTCTCTTGGTGCCTATGTTCGGAACTAAACCTTTTAGAAAAAAGTTATAGCACTTAAAATGTTAATATCCTGTGCACAATGCACAGTTGTAAGCTATTTTTTCTAGTTCATTATTTTGACTCTAAAATAGTTGACTTTTGAAATCCTTTGCCATGTTTTGACATAGATTGTAAATGACAGTATGATTACATGCATCTTGCCTTCGATTGCATTTCTCTAGGTCGTGACAAAATCTGAACCTTCAGAAAAAGCAACAAGCGCTGATGCACAACCAACTCAGGTTATTAATGAGCTCCGCAGGAGTTACACTAGCAAGTTGGAAGAGGTAATATTCAGTAGATGAGTGTTTTTTTCTTGTTCTCTTTTAAGGAATCATATTTCTATTTAATATGCTTTATTGCTTTATCCAATGTATTTTTCAGTCAGAGATGCGGAAACAGGAATTGTTAGCTCAATTGGCAGCGGAAGAACAACGTGGGCATGAACTCACAAAAATAGTCAAGGAATTGCTACCTACTCCTAAGAAGAATATGAATTCGGAAAGGCAACCACGATATAGAAGAGTAAGTTTTCTTCACTGTATTGCTACTTCTTCCTTTGTTATTGAGAATCTGCGAATTCAGACTTTATGTATATATATTCCAGAGAAGCAATGATAGAGCCAGGGTGTCAAGACGTCTTACTGAAGAGGCTGAGCAATACTTCGAAGATTTCCTGTCAAATGTTGAAGATACTGATTTTTCATCTTTTGATGGAGAAAGAAGTGATACAAGTTCAAGCAGAAGAGATGTGGTACAAAACACCAAGATCGAAACTCCAATAACGCTTCCAAAAGTTGCTTCACCCGTCGAGGCAGACGGGGTTGTCCTTCCCTGGCTGCAATGGGAAACAAGCAACGACCTTCAAACCTCTCCATGCAAACCAAAGACACAGGTGACGATAACCATCTCTGTTCTCTCTATGCTAAGTTGTGCTTGTTGTACTTATTTGTATGTCGTTATTGATATTCTGCGAAATTGTTTAACAACACATTTTTAACTGCAGTAAGTAGAATGCCAATATTTTGAGAAAAAAATGCTCTCTGTTATGTGTTTTCTACATATAACATCTTTGTTAGTAATTGTTATCAACATACCATCGCATTGTGGTGCCTGATTAACTGACCATTTCAGGGAGCAAGTACCGCATGCAGCACCAGCAGTCGCACTATGAGCAGCCGCGGGAGTTGGAGTCCTGGAGATCATGATAGCGCAGCTGGCTCCAAGGATACACTTCTGACAAGGTTCGAGGAGGCTGCGTCTCGCCGAAGCAGCTGCCCCGATAACACTCAAAGATCGTCATTTCACATCGATGACTACATGCATTTGCGGAGGAGCCACGATCTTCTCTTGGAGCGATGGAGGCAAAAGGAAAGAATTGGCGACGGTGGCCTTATCCTGTGCAGTAGATCATCAATAATGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA023252