Os11g0622800

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Revision as of 09:17, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0622800| Description = Similar to Cinnamyl alcohol dehydrogenase (EC 1.1.1.195)| Version = NM_001074835.2 GI:297612211 GeneID:4350952| Leng...")
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Gene Name

Os11g0622800

Description

Similar to Cinnamyl alcohol dehydrogenase (EC 1.1.1.195)

Version

NM_001074835.2 GI:297612211 GeneID:4350952

Length

5318 bp

Definition

Oryza sativa Japonica Group Os11g0622800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:26145057..26150374

Sequence Coding Region

26145057..26145145,26145562..26145675,26146089..26146155,26146189..26146316,26149361..26149646
,26149839..26149989,26150178..26150374

Expression

GEO Profiles:Os11g0622800

Genome Context

<gbrowseImage1> name=NC_008404:26145057..26150374 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:26145057..26150374 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctgctgaatgtgggagtggcaactgtgatgcttgggcagcgagagatccttccggaatcctctccccgtacaaattcaaccgcagggaagtacagagtgaagatgtttctttgaggatcacacactgtggagtatgttatgctgatgtcatttggacacggaatatgttcaacgattcgatataccctttggttcctgggcacgagatagctggagttgtaactgaggttggtgcagacgtcaaggggttcaaagtgggcgaccatgactgcgagaactgcaatagctctctggagaaccactgctcgaaatgtgtcgtcacttacaacagtgttgattcagacgggaccgtaacaaagggtggatattccagtcatatactagtgcatcaaaggtactgctttaaaatacctgctgactaccctttgtcaaaggcagcaccactgctttgtgcgggaattaccgtatatactccaatgatacgacataacatgaaccaaccagggaagtcacttggcgtcattggactaggtgggttgggtcacatggcagtaaaatttgggaaagcctttggactcaaagtgacagtttttagtacaagtgaatcaaagagagaagaagctatcaaccttcttggtgcagataattttgtgatatcatcagatgaaaatcagatggagtcactgaaaagttcccttcacttcattattgatactgcatctggtgatcaccagttcgatccttatctctcgcttctgaaagttggtggtgtaatggtgctacttagcttcccaagtgaaatcaaagttcatcctgaaaaccttaatctcgctgcgcggagcttagctggtagtgtaacagggggtacaaaggatatccaggagatgataaacttctgtgctgcaaacaatgtttacccagatatagagatgatcaagatagactacgtcaacgaggctcttcagaggctcatcaaccgggatgtgagattccgctttgtaatcgacatcgagaactctttcaagtag</cdnaseq>

Protein Sequence

<aaseq>MAAECGSGNCDAWAARDPSGILSPYKFNRREVQSEDVSLRITHC GVCYADVIWTRNMFNDSIYPLVPGHEIAGVVTEVGADVKGFKVGDHDCENCNSSLENH CSKCVVTYNSVDSDGTVTKGGYSSHILVHQRYCFKIPADYPLSKAAPLLCAGITVYTP MIRHNMNQPGKSLGVIGLGGLGHMAVKFGKAFGLKVTVFSTSESKREEAINLLGADNF VISSDENQMESLKSSLHFIIDTASGDHQFDPYLSLLKVGGVMVLLSFPSEIKVHPENL NLAARSLAGSVTGGTKDIQEMINFCAANNVYPDIEMIKIDYVNEALQRLINRDVRFRF VIDIENSFK</aaseq>

Gene Sequence

<dnaseqindica>1..89#506..619#1033..1099#1133..1260#4305..4590#4783..4933#5122..5318#atggctgctgaatgtgggagtggcaactgtgatgcttgggcagcgagagatccttccggaatcctctccccgtacaaattcaaccgcaggtgaatgatcacataacattccattgagattttgtaacgaaaaatgtcaactttgaaacatgaatgtctttctagcattgttaagagatcttcctagtctccagtgctctctcatataagcaaaatgaactatatatccagccacttaaatcatggccaatttcacttttcggctagttgcattcatagttggaatgtgagtgtcagcttgccaagttagttgtgtcgatttttgttcttgccagctcgacaaactggatcacaaaatcgatagttttttattgaatgccgtgaaaaacgagtggacaaaatatttaaatgtctacacagacttactggattaagattgcaaaattaattagttgattcatattttactgcatgttctagttgatcgataacctgattgatttcagggaagtacagagtgaagatgtttctttgaggatcacacactgtggagtatgttatgctgatgtcatttggacacggaatatgttcaacgattcgatataccctttggttcctgggtaagatcgattgtcagatcaatttaccatacttgagatttcagaacagcggggaaaatgataagctccagtctttctgtgttacggatcataattaaattgctagctagctagctactccctcccgtattctaatgtgacttttcaactaacgttgaccattcgttttattcaaaaattttatgcaaatatgaaaatatttatgtcatgcttaaaaaacatttgatgacgaatcaagtcataataaaataaatgataattatataaattttttgaataagacgaatggtcaaacgttggataaaaattcaacggcgtcatacattaaaatatggaggtagtagtacttttgtttgatgcaaagataaatgtttaccccctaaatcgggtgtcttaacattcaatttgagtaggcacgagatagctggagttgtaactgaggttggtgcagacgtcaaggggttcaaagtgggcgaccatgtaggtgttggcgtatatgtgaattcatgtcaggactgcgagaactgcaatagctctctggagaaccactgctcgaaatgtgtcgtcacttacaacagtgttgattcagacgggaccgtaacaaagggtggatattccagtcatatactagtgcatcaaaggtactctgctttcttgttaattttctgacataacaaaccgaccaaaaagtactccctccatttcaagttataatatgttttaactttagtcgaagttaaaatgtttttaagtttgactaagtttacagataaatatagtaatatttataatactaaattagtttcatcaaatcaataattgaatatatttttataataaatttgtcttgggttgaaaatgctactaccttttttataaacttggtcaaacttaaagccatttgactttaaccaaaatcaaaacatattataacctgaaacggacggagtaataattatattagttatatagacataaatcttataaataatgtggattatatatccatgggtaggggtgaaaatggtatggaaatttctcgaccgtaccgataccgtttccgcaaaactaatataataataataattttaccgatgttaccgttttcaaaatttagtttttttaatttctgtcagcgtggcattgaagttggcactaaatagatgaattcataaatatggaaatttcccgaccgtttctgttcgttttccaaaaaaataataaaataatgtactgtttccgaccatttccgaccgttttcatccctatccatgggggagtactgggttcgtacccactgaacacgtatcttaatactaaatgacaggttttaaactgaaatgtactacctccgtcccaaaataagtgcagccgtggatatccgtgtccaatgtactattcatattttatcatctaataactataaaaatactaatcataaaaaaaatttaaataaaacgaacagtcaaacgtttaacatgaagaatacaaaactacatttattttaggacggagagagtaataaacaaggtacgaaagtgtcaaatatggagttataattctatatgggtatggatcataaagaattctccatatatatatattactccctccggtccataataaacaaggtacgaaagtgtcaaatatggagttataattctattatatgggtatgtatcataaagaattctccatatatatatattactccctccggtctaaaatatagcaatttttaggtagatatgatatataatagtactacgaatctagataaaaggttgttatactttggaatagaggaagtaggaaatatggggatgcagttacggattgaacacatctgattgaacattaaaactcaagcacccgacatactctgagttgctgcgctctaatcatatccgcgtgcacgcatttactcttttcgctgagtttggctgcaacatacgtactccctccgtctaaaaaaagacaaaccattagtttctgtcttatataattgttttttataattagtattttcattgttgttagataataaaacatgattaatactttatacgtgacttatctttttaattttttttaaataagacggacgttggacacaaaaattcaggatttttttcttgacggagggagtactggtcactgtattctgttgaatgcaagcccgtctcctgctctcttctctaacaacactttagcaaaactttaaaaatacttttttataaattatttatctaatttgattcgattacataattgtatatgtatatacatgattatatttataattgaaatatttttatgtcatatatgaaacatcgagtacttctaattaaaatatttttatatcatatataaaacatcgagttgtagttgctaaaagagtacaaaatacttgatggaactgttggcaacttttcgtgataagttgacaagcacgatcgcaacacctaaacgcctggcggtgatcctagagtcgccaactacctcgatctagcaaaagctaaatcaagatgggttttgataactaaatcggctagcggagccgattctaaataactacccgtctcgtgggcaaaatagaaggttttcaggacaaatctacaaagaggtgtcgcactctcgcagcggcggcgtacgatttacagcgcaaatcgacaaagatggacgaactaaagcaaaaactaaaagcaatatgaaaaacgattcgattgattgattgtagattgattagttacaattgaaccgaccatgtcccttatataggggttggtcctgccctctacagaccctcctccacgtccaactcgggatagaatccaaaggaaacccgaaacatgccttcccgagtaaggaaactttgagacccgacgaaatacactcggactcggaccctgctggtcagaccggccacataccggcggtctgaccggccaacacatggcggtcagaccgacccactcgaaagaaaccggcagacttccaaactctggcaattttttctattttactcttagatgccaaatttgggtgtaaacaggaacatcaaagaacaccattgcacttacaatatttacaaatgaattagagaaatatcataaatattttgttaaaacatcccagcaacgccgtgtgcaatgactcacttttcattttcacaaacatttacaaatgattcaacccctaaataaaattttgggttattttaccagctaaactatttgacacgactcactttactccccagtggtatttgtccttttcatttcattttatataagtcgtattttgagttgaaactttgtatagccgtagatgacatcatatactatgttacaaaatatttttaaaaaatttatactatggtttgcttgtaggtttaaataagtttcaggtgctttcaacatatgcaaacagtgattaaaatccaaaaaaaaagtttgagatgtaaggtgcaatgttatctttatctcacaaatttgaacttaaaatgtctgttataaaagagaaaatggtctgtcattacttctgtattatgttgattacaattaccatataattaagtaatcttgggactacgaatgtttgtattagctgcccttctatctactgatgtgaaaaacattgtaattaagctaattgcatcttctttgtttcattgacatggcaggtactgctttaaaatacctgctgactaccctttgtcaaaggcagcaccactgctttgtgcgggaattaccgtatatactccaatgatacgacataacatgaaccaaccagggaagtcacttggcgtcattggactaggtgggttgggtcacatggcagtaaaatttgggaaagcctttggactcaaagtgacagtttttagtacaagtgaatcaaagagagaagaagctatcaaccttcttggtgcagataattttgtgatatcatcagatgaaaatcagatggaggtacattgtaaaaatattttttgctccattgtgtagaattattttgctactcctatatatgagcatgccgatcataagttgttttattggcaaatgtcatttggaaaatatggtgctaataacttcttcttgtcttctcattcctcttgcaacaaactaaatgtgcttatgacaaattaatcattgttgcagtcactgaaaagttcccttcacttcattattgatactgcatctggtgatcaccagttcgatccttatctctcgcttctgaaagttggtggtgtaatggtgctacttagcttcccaagtgaaatcaaagttcatcctgaaaaccttaatctcggtaatgcatatttctcataccaatatatatatatatatatatatatatatatatatatatatatatatatatatatatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtggtgtgtgtgtctgacagaatggggagaaaattaatggattaattacaagtaatctgaacttacgcagctgcgcggagcttagctggtagtgtaacagggggtacaaaggatatccaggagatgataaacttctgtgctgcaaacaatgtttacccagatatagagatgatcaagatagactacgtcaacgaggctcttcagaggctcatcaaccgggatgtgagattccgctttgtaatcgacatcgagaactctttcaagtag</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0622800, RefSeq:Os11g0622800