BGIOSGA023330

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Revision as of 13:31, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA023330| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA023330, complete gene.| tag = P0523F0...")
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Gene Name

BGIOSGA023330

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA023330, complete gene.

LocusTag

P0523F01.18

Ensembl Transcript ID

BGIOSGA023330-TA

Ensembl Protein ID

BGIOSGA023330-PA

Length

4730

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:27118336..27123065

Sequence Coding Region

27118336..27118888,27119931..27120126,27120231..27120378,27120947..27121025,27121426..27121513
,27121605..27121875,27121951..27121993,27122076..27122179,27122649..27123065

Genome Context

<gbrowseImage1> name=IndicaChromosome06:27118336..27123065 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:27118336..27123065 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAACTTTGTAAGGAAAGCTGATACGAAAGACTTAGCAAATTCTAACATCTCAGTTGAAAGACCCAAGACCCCTCCTTTACCACTTCACACAAAATCCAGCTGCCCTACAACCCTTTTGGAGCCATTGTCTCAAACTTTGCAGAAACAGCATGGTCATGATGCTGAAAAGGAGGATCTCACTGGGCAGCCAAAGTCAGGCGTTGATAACTCAAGCATCAAAAGTGCACAAAAATCTGAACCCTCGGATCCTAGTAAAGTGGTTTATGTTAGGCCCAAATCAAACCAACTGGTTGCTGCACAGAGGCAACACCCTATTGATTTAGTCAACAGTCCCACAGATAAGATTCTGTCTCTGCAGGCACCCATAGCATCTGATCTCTATTTAAAGAAAAGGAAAAATCAAATTGTTTTGAGTTCCTGCTCCCCTTCTGATGGTCTGAGTACCAAAGAAACGTTACCTGCTGAGAATTCAAATTCAGAAGAGAAGAAAGATCTAATGATTGCATGCTCTATCAGTGGTATCCCTGGGGTAAAGGACAGACCACAAAAAGCTCTTCAGACAACAAATAATGTGGGGCGTTTCTCTCATGTGTGGACACTCAATGGGCAACAGCCACAGAGGAAAGGTTTTATGGGCAGTAGTCATATGAATGCCTTCCCACGTATACTTCCATGGAAAAGAAAAATATTCTGCAAGAATTTTAGAAGCAGTCACATGTCGAATGTGAGCTCCATACGAATTGTCAGAAAATTGCTGCAAACAAGGAAGAGAGATATGATTTATACTGTCTCAACTGATGGGTTCTCTCTACGGAAATCTGGTGTGTTAAGTGTTGGTGGATCAAGTTTGAAATGGTCAAGATCCCTTGAGAAGCGTTCTCAAAAGGTCAACAAGGAAGCTACATTGGCACTCGCTGAAGTTGAAAGAAGGAAAAGGGAGAAACGGAAGCGGCAGTCTCTCCATGATAAGGGAGATCATCAATTTGAATCTGTCACTGGCAATCAATTAAGAAACAGCTGCCAATCGTCTTCCGATTTGAGAAAGCCATCGACTTGCAATGAATATGTGCGCGTTAGCAAAGGTAACCAACTGGTTAGAAATCCGAAGAATGTAATCCGCATGCTAGCAAGTGACAAAGTTCGATGGAGTTTGCACACTGTGAGATCACGCCTAGCAAAGAAACAACAGTACTGCCAATTCTTCACTCGGTTTGGCGAGTGCAAAAAACCCAGGGGCAAATGCCCTTATATTCATGACCGAGCTAAAGTGACTATATGTACTAAATTTCTTAAAGGATTGTGTTCTAATACTAGTTGCAAACTGACTCACAAGGTCCTTCCAGAAAGAATGCCAGATTGTTCTTATTTTCTGAGAGGACTCTGTACCAACATAGCCTGCCCCTATAGGCATGTGAAAGTGAACTTGAATGCTCCTGTTTGTGAAGACTTCTTAAAAGGATATTGTGCATATGGTGACGAGTGTCATAAAAAGCACAGCTATGTATGTCCTGTCTTCGAGGCAACTGGAGAGTGCCCACAAGGATCTAGATGCAAACTTCATCACCCGAAGAGCAAAGTCAAATCCAAGAGCAGAAGACCAGATTTCTTGCAAAACAGTAGTTGGGGCCGGTATTTTGATGCCAGCATTGACCATCAAGATGAGACAAGGAAAGTTTCTTTAGACGAAGACGAGAGAGAGAAACCTCAACGTGTTTTCTCTGATGGGGATTTGGGCTTTATCAGCTTGGATGATGATGCGGATGAAGATGTTACAGCTTTAGATGCGTCAGATGATATACCGCTGATGGAATTGGACTCGGGGGATTTAAGTGCGCAGACTGATAATCTTGATGCACTAATCAAGCCACTTCGGATCATGAGAACAGCAAGAGTTTGA</cdnaseq>

Protein Sequence

<aaseq>MNFVRKADTKDLANSNISVERPKTPPLPLHTKSSCPTTLLEPLSQTLQKQHGHDAEKEDLTGQPKSGVDNSSIKSAQKSEPSDPSKVVYVRPKSNQLVAAQRQHPIDLVNSPTDKILSLQAPIASDLYLKKRKNQIVLSSCSPSDGLSTKETLPAENSNSEEKKDLMIACSISGIPGVKDRPQKALQTTNNVGRFSHVWTLNGQQPQRKGFMGSSHMNAFPRILPWKRKIFCKNFRSSHMSNVSSIRIVRKLLQTRKRDMIYTVSTDGFSLRKSGVLSVGGSSLKWSRSLEKRSQKVNKEATLALAEVERRKREKRKRQSLHDKGDHQFESVTGNQLRNSCQSSSDLRKPSTCNEYVRVSKGNQLVRNPKNVIRMLASDKVRWSLHTVRSRLAKKQQYCQFFTRFGECKKPRGKCPYIHDRAKVTICTKFLKGLCSNTSCKLTHKVLPERMPDCSYFLRGLCTNIACPYRHVKVNLNAPVCEDFLKGYCAYGDECHKKHSYVCPVFEATGECPQGSRCKLHHPKSKVKSKSRRPDFLQNSSWGRYFDASIDHQDETRKVSLDEDEREKPQRVFSDGDLGFISLDDDADEDVTALDASDDIPLMELDSGDLSAQTDNLDALIKPLRIMRTARV</aaseq>

Gene Sequence

<dnaseqindica>1..553#1596..1791#1896..2043#2612..2690#3091..3178#3270..3540#3616..3658#3741..3844#4314..4730#ATGAACTTTGTAAGGAAAGCTGATACGAAAGACTTAGCAAATTCTAACATCTCAGTTGAAAGACCCAAGACCCCTCCTTTACCACTTCACACAAAATCCAGCTGCCCTACAACCCTTTTGGAGCCATTGTCTCAAACTTTGCAGAAACAGCATGGTCATGATGCTGAAAAGGAGGATCTCACTGGGCAGCCAAAGTCAGGCGTTGATAACTCAAGCATCAAAAGTGCACAAAAATCTGAACCCTCGGATCCTAGTAAAGTGGTTTATGTTAGGCCCAAATCAAACCAACTGGTTGCTGCACAGAGGCAACACCCTATTGATTTAGTCAACAGTCCCACAGATAAGATTCTGTCTCTGCAGGCACCCATAGCATCTGATCTCTATTTAAAGAAAAGGAAAAATCAAATTGTTTTGAGTTCCTGCTCCCCTTCTGATGGTCTGAGTACCAAAGAAACGTTACCTGCTGAGAATTCAAATTCAGAAGAGAAGAAAGATCTAATGATTGCATGCTCTATCAGTGGTATCCCTGGGGTAAAGGACAGACCACAAAAAGGTAATCTATTGTACAAACCATTTGTTACTTCTTCTTCCTTTGCAAACTTTACCATCTAATGAAAACCCTAAAATTTCGAAGTTCACTAGAATTTTGTTTTGTAACCATAAACAATAACCACCTTTACACCTTTGGAAAACTTATAATGGTCTTCCATTTATTCAAAGTTCAATCAATGAACAGGAACTATTTCAGTGTAAGGAACTTTATCTAAACTTAAAGATAAAAGGTTAAGAACCATACTCCAAATGTGAGTTAGAGCCTTACAGGTTAATAACCAAATTAGGATAATGTGGTTTTAAACAAGCCATTTGTTTAATATCTTAGCCACACTGAAGCTCTAGACAGGGATCACTATTCTGGTTATGCTTATTAAATGATGGCTTTCCATTTTGCTTATGGTTTCATCATCCCATTTCTTTACCTTTTATGGTGTAGCATATGTTTGTTTACTACTACTATATTATTTTCTTGTGCTATTTGTTTTCGGGTTCTGCTAAATTTGTGGCGCCACAATTTTACCTTGATTTCAGTCGATTCTTTGACCCACACGATTGACGCCGAGATTCGTGCTCTTGTACATAACCACCAGAAATACGATAACTTCACCGAGCAGATGTGTTACGTTGGGTACTGCTACATGCTCGTACACAGTTGCACATTGGTCAAAGTAAGAGACCGTACGAATGAGAACACGTAACGAGAGAGGGATAAAATAGTTAGTGTTATATAATTACTTCCTACTTACACTATAATTACATGCTATTTACATATGTAATTTTAGAACTTACATATGTAATTTTGAGACTTACAGTGTAAATACATTAAAATTACATATGTAATTTTAGGGACTTACAATGTAAATACATTCTGACTATTTTTTCATGAAAAATATGGCGCCATATAGATAGATAGTCCCTTTGTTTTTGCCTCTTGATCTGTTACTTTGGAGGGTACAGCATTATGTAAACTGATAATGTAATATTGAAGCAATGCTAATCCCTTCGTACTATATTATATGCATACACTTCTCTCAATGCAGCTCTTCAGACAACAAATAATGTGGGGCGTTTCTCTCATGTGTGGACACTCAATGGGCAACAGCCACAGAGGAAAGGTTTTATGGGCAGTAGTCATATGAATGCCTTCCCACGTATACTTCCATGGAAAAGAAAAATATTCTGCAAGAATTTTAGAAGCAGTCACATGTCGAATGTGAGCTCCATACGAATTGTCAGGTAAATATTTCAGTCTGGTCTTTTCTCTGTACCTATTTCTATTCATTCACTTTACTTTATTGAATTTTCTTACTGGCATGTCCTGATCCTCTATAATTTGATAGAAAATTGCTGCAAACAAGGAAGAGAGATATGATTTATACTGTCTCAACTGATGGGTTCTCTCTACGGAAATCTGGTGTGTTAAGTGTTGGTGGATCAAGTTTGAAATGGTCAAGATCCCTTGAGAAGCGTTCTCAAAAGGTCAACAAGGTATTTCACTTCAGTGAAATTTTTGTTCCTAATTTCTTGTTCAGTCATCAACAGAAATGATTCCAGGAGTTCTATAATTCTATTCATCTGATCATGATATCTAGAAGTTTCCAGCTCAGGTTGTGCTGGGTATACACTTGAGTTATTAGAACAACTATACGATTTTAACACTCTTTCACTGGTTAAACTGTAAGCTCTAAAGACAGGGATGTTGCAATGAATGCCCACCTTATGCTGGTGCCTTTTTTTTTTTTAAAAAAAAACAATGCCTATATCTATAGCTTTTGGATCCATCCATCACAATCATATTTTATGATCTGGAGCATATGACCTGAAGAAATTCTGTTATCTGATAAATGATGTCGCCCTGCTAAGACTCATTTGTTTGATACTACATGAGCATCTGAATTTTAAATAGTGTAACCATGGATGGCCTTTTAAAAGACCATATACTAAAAGCTACAGGGTGGAGTGACTGTCCAATTGCTGCATTTAGAACATCAGTATTAATCTATGGTGCTTTTATTCTCATTATTAAACAAAAATCAAATTGCACTCTGGATTGCAGGAAGCTACATTGGCACTCGCTGAAGTTGAAAGAAGGAAAAGGGAGAAACGGAAGCGGCAGTCTCTCCATGATAAGGGAGGTAATGGTAATGTGTTAATTTGTGAATTTGACATGGTTAAACTTTTCTTATTAGTACTGATGAAGAAGATTTAACTAGTTCTCAAGTAAAACTCTCATGCTCCTTCATGTTAAAATTTCAACTTAAGTTCCAACTTACCAAATAAACATTTGAGCTGCTATAGACAGAATTGCATTATGGCATTACTTTATAGAGCACAAGGAACCTGTTTTGTTACTCTAGTTTGAGCACTGTGGCTTATTGATCACCTTTTTAGGTGCTTACCATCGATGAGTTCATATTTCTTGTGGAAACATGTTTCCTTGAATTGCCTTTCTCTGCAAACATATATTTTACTGATTAATCATTTTTTTTCATTAGCTTTTCTTTGTTTACGCTCTATGATGTCTTAATTTTGCAGATCATCAATTTGAATCTGTCACTGGCAATCAATTAAGAAACAGCTGCCAATCGTCTTCCGATTTGAGAAAGCCATCGACTTGCAATGAGTATGTTATGAACACGTGTTGAGTATGTTATGAACCCTTTTATCATAGATATTCTAATTTGACTCATTCCCTTGTTTTATGTTTGAAGCAGATATGTGCGCGTTAGCAAAGGTAACCAACTGGTTAGAAATCCGAAGAATGTAATCCGCATGCTAGCAAGTGACAAAGTTCGATGGAGTTTGCACACTGTGAGATCACGCCTAGCAAAGAAACAACAGTACTGCCAATTCTTCACTCGGTTTGGCGAGTGCAAAAAACCCAGGGGCAAATGCCCTTATATTCATGACCGAGCTAAAGTGACTATATGTACTAAATTTCTTAAAGGATTGTGTTCTAATACTAGTTGCAAACTGACTCACAAGGTAAGGTCTTTCTTCTTGATTCTATACTAATCTTGCATTGACATTTTTTTTTCATTTCAAGAGCATGTATTGCAGGTCCTTCCAGAAAGAATGCCAGATTGTTCTTATTTTCTGAGAGGTGATTCATTCCAGTCTAACGTCATTACTTTCTCTTTCTTCTGCAAAAAAATGTCGTGCTTACATTTTGGCATCACATGCAGGACTCTGTACCAACATAGCCTGCCCCTATAGGCATGTGAAAGTGAACTTGAATGCTCCTGTTTGTGAAGACTTCTTAAAAGGATATTGTGCATATGGTGACGAGGTATGTGATGCTATCACTAGATATCTGCTGATCTTTATCAAATTTCCGCTCGCAGAATCACAGAATAACGTAGATGCTTGTTCAGTTTCCTACATTTTAGCTAAAGGAGGAATTCAGCATCAGGTGCACAAAAAACTGTTCAGTGCGATAGGCTGTTCTTATATTCCATCAATCAAATAATAACTCCTTGCGCTTTAAATACTTAGTTGATATAATCCACTGCATGAGATTATAGGAGTTCTTTTTCCTGTAATCTAGGAAGGCATGCATCTGATTGTTCAGTCTACATGGCGTGTCTAGTGTTATTTAGTGTTGATATATATAATTAGATGAAAATGATTTTGCTGGTAGTTTTTTGCCATGTACCCGTTAGCCTTTTGAACTTTGGGGGCTTTCACAAACCTTTGTGTATTCTGAATAAAGATCACTAATCTTTTTCATGATCTTGAAATAATTTCTTTACAAGCAGTGTCATAAAAAGCACAGCTATGTATGTCCTGTCTTCGAGGCAACTGGAGAGTGCCCACAAGGATCTAGATGCAAACTTCATCACCCGAAGAGCAAAGTCAAATCCAAGAGCAGAAGACCAGATTTCTTGCAAAACAGTAGTTGGGGCCGGTATTTTGATGCCAGCATTGACCATCAAGATGAGACAAGGAAAGTTTCTTTAGACGAAGACGAGAGAGAGAAACCTCAACGTGTTTTCTCTGATGGGGATTTGGGCTTTATCAGCTTGGATGATGATGCGGATGAAGATGTTACAGCTTTAGATGCGTCAGATGATATACCGCTGATGGAATTGGACTCGGGGGATTTAAGTGCGCAGACTGATAATCTTGATGCACTAATCAAGCCACTTCGGATCATGAGAACAGCAAGAGTTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA023330