BGIOSGA023334

From RiceWiki
Revision as of 13:31, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA023334| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA023334, complete gene.| tag = P0523F0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA023334

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA023334, complete gene.

LocusTag

P0523F01.38

Ensembl Transcript ID

BGIOSGA023334-TA

Ensembl Protein ID

BGIOSGA023334-PA

Length

3367

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:27199734..27203100

Sequence Coding Region

27199734..27199994,27200422..27200611,27200730..27200801,27200890..27200964,27201047..27201111
,27201189..27201291,27201397..27201447,27201956..27202109,27202466..27202610
,27202724..27202829,27202952..27203100

Genome Context

<gbrowseImage1> name=IndicaChromosome06:27199734..27203100 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:27199734..27203100 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGCTGCTATTGGCGGACCTCAGAATCTACCGGCTCATCCGCGGTGGGGGCACGCTCAAGCCGGCAGCAGCGGCAGCGCCGGGGCGGTTCGGGAGCAAGCGGTCGGCGAAGTGCTTGCCGGACCTGTCGCCGCCGGGCGCGAGGCTGCTGGCGGGGCCGTCCGGGTCCGGCGACGCGGCGGCACAGTACCAGGAGAGGAGCGAGCCAGAGCTGATGCTGAGCAGCAACAACCACACCCTCGTCTACACCTGCGACAACGCTCGCGGCGTCTACTCCTCCACTCCACCAGAGCGAAACTGCAAGGCGGCAATGGAGGCCGGAGATGGAAGAGGAGGAGGAGCGGAGGAGGAGGAGGAGGAGCAGGTGATGAGCGAGGTGCACCTGGGATGCCCGCCCCGCTTCTCCGGGCTCTACGTCTCCCGCTTCAGCTTCTCCTCCCGCCCGCTAGGGCCATCTGCGGGCAGCGACGGCGGAGAATGTAGCGGTGTGCGCGAGCAGGTCGCGGCGTCGAGCAGTTCTTGTGGTTCGCCTGACGCTGTTACCGTGGATGAGGACGGGGATCTCGTTCTTGACAGGAGAAGAAGGAACAGAGGCAGGAGGGATCATGTGCTCACTGTTCAGCATGGTATCACCTCCTCTCTTAGGAGCGTTGGTCTCCAGGTTTGGAAGGCGGCATTGCTATTAACTGATTTTGTATTGCATAAGAGCTTTACATCGTCTGAGTTTAATGGTGTTACTGCCATAGAGATCGGTGCTGGGACAGGTTTGGTAGGGTTGGCACTAGCTCGAGTTGCTAAGAAAATCTTCATTACAGATAGGGGCTCTGATATCCTCGATAACTGCTTGGCTAATGTCCAACTTAACTCAAGCATGCTAAAGTTTGATGAAGCTAAAGCCTGTGTGCGGGAACTGGATTGGAAAATGTCATGGCCTCCACCTGTGTTTAAATGTGATTCATCTGATCCAAGTTCAAAATACTTATGGTATACAAGTGAAATCGAGGTGGCTGAGAAAGCTACAACACTATTTGCTGCGGATGTTATTTACAGTGACGATCTGACTGATCTGTTTTTCAGCATAGCAAAGAAACTGATGTCTCATGGTGCTGAGAAGGTATTGTACTTGACCCTGGAGAAGAGATATAACTTCAGTATGGACGAACTAGATGTTGTAGCCAATGGTTACAAGCACTTCCGAAGTTTCTTCACGGTTCAGGATGAAAGCGGAGCTCTGGATGATAATTCATGTAGACCAGATTTTGTTGGAGAGCAGATGGACCTTGCAGAGGTTCCTCAGTACATCAGAGAATATGACAGGGGCAAAGATTTGGAGATGTGGAAGATAATGTACAACCCAAATCCAGAATAG</cdnaseq>

Protein Sequence

<aaseq>MELLLADLRIYRLIRGGGTLKPAAAAAPGRFGSKRSAKCLPDLSPPGARLLAGPSGSGDAAAQYQERSEPELMLSSNNHTLVYTCDNARGVYSSTPPERNCKAAMEAGDGRGGGAEEEEEEQVMSEVHLGCPPRFSGLYVSRFSFSSRPLGPSAGSDGGECSGVREQVAASSSSCGSPDAVTVDEDGDLVLDRRRRNRGRRDHVLTVQHGITSSLRSVGLQVWKAALLLTDFVLHKSFTSSEFNGVTAIEIGAGTGLVGLALARVAKKIFITDRGSDILDNCLANVQLNSSMLKFDEAKACVRELDWKMSWPPPVFKCDSSDPSSKYLWYTSEIEVAEKATTLFAADVIYSDDLTDLFFSIAKKLMSHGAEKVLYLTLEKRYNFSMDELDVVANGYKHFRSFFTVQDESGALDDNSCRPDFVGEQMDLAEVPQYIREYDRGKDLEMWKIMYNPNPE</aaseq>

Gene Sequence

<dnaseqindica>1..261#689..878#997..1068#1157..1231#1314..1378#1456..1558#1664..1714#2223..2376#2733..2877#2991..3096#3219..3367#ATGGAGCTGCTATTGGCGGACCTCAGAATCTACCGGCTCATCCGCGGTGGGGGCACGCTCAAGCCGGCAGCAGCGGCAGCGCCGGGGCGGTTCGGGAGCAAGCGGTCGGCGAAGTGCTTGCCGGACCTGTCGCCGCCGGGCGCGAGGCTGCTGGCGGGGCCGTCCGGGTCCGGCGACGCGGCGGCACAGTACCAGGAGAGGAGCGAGCCAGAGCTGATGCTGAGCAGCAACAACCACACCCTCGTCTACACCTGCGACAACGTGCGGTGCAGTGCCCGCACAGCAACTACGCGCTCGGCTTCCTCGACCACTTGCTCTGCTGTTTCTTTTTGGGGGATTTGGGGGAAAAGATAGAGAGGGAGAAGATGGCTGACAAGTGGGCCCTACGCTTTTTATATTTTCTCCTATCACTTACATGTGGGCCTCATCTGTATTTTGGTGACTGGGCTGACACGTCAGCACAATAGACCAAGTCAGCATGCCACGTCAGCAAAACCACCCTCAAAAACCACTTAGGGAGTCAATTTGTACTGGTTTTAGTAATTGGGGGAGCCATTCTAACCGGTTTTCTGGTTGAGGGGTACGAATTAGATTCGGTGTATATTTAAGGGAGTTAAAGTGGACTTTTTCCTTAAAGGTGTAGTAGATATTTCCGGCCCATTAGGCCCACGAGCTTTCCTCTTCGTAGGCTCGCGGCGTCTACTCCTCCACTCCACCAGAGCGAAACTGCAAGGCGGCAATGGAGGCCGGAGATGGAAGAGGAGGAGGAGCGGAGGAGGAGGAGGAGGAGCAGGTGATGAGCGAGGTGCACCTGGGATGCCCGCCCCGCTTCTCCGGGCTCTACGTCTCCCGCTTCAGCTTCTCCTCCCGCCCGCTAGGTAACAGCCCGGTCTCGCGCATTCCGTCGAACACCTTGCCTGCACCGCCTTCTTGGGCGCAACCCGATGTGGGGGGTGGATGGAAGAGCCATGGTTTAGTTCGATTCGATGTTTGCAGGGCCATCTGCGGGCAGCGACGGCGGAGAATGTAGCGGTGTGCGCGAGCAGGTCGCGGCGTCGAGCAGTTCTTGTGAGCGTGCGTGGGGCTGTTTCTTGCTATGGTGTAGAGGACTGAAAGGTGGTGCTTGCTTGAACTGATTCTTGGCTTTGTTGGGAAGGTGGTTCGCCTGACGCTGTTACCGTGGATGAGGACGGGGATCTCGTTCTTGACAGGAGAAGAAGGAACAGAGGCAGTGAGGCATTTGTTATTTTTAACTGCATTCTGTCTTGCCGAAATTGGTGGTTTGTGCAGTTAATCTGACCATTGGCTTGCAGGGAGGGATCATGTGCTCACTGTTCAGCATGGTATCACCTCCTCTCTTAGGAGCGTTGGTCTCCAGGTCTGAGAAAATGCTGCTTTTGTAATTCCTTTTCGTCTTCCTTTTTGTTTACGATCACGTTTGTTGTTGGTTCACAGGTTTGGAAGGCGGCATTGCTATTAACTGATTTTGTATTGCATAAGAGCTTTACATCGTCTGAGTTTAATGGTGTTACTGCCATAGAGATCGGTGCTGGGACAGGTGATTAGTCGATGTGAAATTAGTCAAAAAGTGTTCCCAGAATCATGATTTATGTGTCATTTGTTACTAATTTAGTGATCCTCTACAATCATGAATGTTTGCCAGGTTTGGTAGGGTTGGCACTAGCTCGAGTTGCTAAGAAAATCTTCATTACAGGTAGGTAGTTAGGCCTTCTCGAGTCCGATTCTGTAGAGTTGTTCGTTTTAGAGTTTTACCTTTTGTCCAGTTGCATGTTCCACATCAATCCAGTAGGTATAATTTGATCCGTATATCTGACAAACAGGGTTAATTGAAATGGCAAAACTATATAACAGAATCTGGTTCAAATGAGAATTCAGTTCCATGTGCGACCGCATAAATCAAAATTTCCTCTACTATACATGGATCTAATTAGTCTAAGAATGCAATTCCAATTCTAATCCTTATACTCAGTTTCAATCTATGAAGCTCAAAGTCTTATTTAGTGTTCATTGTCTTGCATTATTTGACTCAATTTTGCTACTAAGATAAGGTAAATAACCCAGCAGGAGTATTACTTACTGTTTTCCTTAGTCTTAGTAACCTTTCCTTGATATATAAAAGGTTAGTTTTGCATGACACCTGTAATTTGGTAATGTTAAAATCTTGATAACATTTCGGCATATTCATCATTGCAAATGATCAGATAGGGGCTCTGATATCCTCGATAACTGCTTGGCTAATGTCCAACTTAACTCAAGCATGCTAAAGTTTGATGAAGCTAAAGCCTGTGTGCGGGAACTGGATTGGAAAATGTCATGGCCTCCACCTGTGTTTAAATGTGATTCATCTGATCCAAGGTTATTTCTGCTTCTACACCAACTATTCCCACTTATACAAATTTTCATACATCATAATATGCGTTATCTACCACGAATTCATGTAAAAATGTGAATGCGAGTATCTGATAGTCATGTGCGTCTTCACAACTTTTGGTTAATTAAAAATTCATGTAAAACTTGCAGGATTAGTACATTGTTGTGTACAAAGACATGGGAGTTTTTCTACACTTCTTTGTGTAATACGCTTTTGCATGTTTTATGTTTTTGGTGAACATACCCTCAGCATTGGTTAGGAACATGTTCTCCAATGCTGTTTGAGATACAAAATTTTTTTTAATGATTGATGCCTAAGTAAAACGGTTTTTCCAATGCAGTTCAAAATACTTATGGTATACAAGTGAAATCGAGGTGGCTGAGAAAGCTACAACACTATTTGCTGCGGATGTTATTTACAGTGACGATCTGACTGATCTGTTTTTCAGCATAGCAAAGAAACTGATGTCTCATGGTGCTGAGAAGGTATCGGTTTATCCGGTTACCGTCATTTTTTCTTAAAATTTGACAAAAACCCTAAGATAAGATGTTTCTCCTCTCCATGCTGAAGACTTGGTATTCTCCTTCGTATCTGGTAGGTATTGTACTTGACCCTGGAGAAGAGATATAACTTCAGTATGGACGAACTAGATGTTGTAGCCAATGGTTACAAGCACTTCCGAAGTTTCTTCACGGTTCAGGATGGTAGGTTGTTTGCAAAGCATTTTGATCAGCTAAGAATACGTAGAATTGGTATCAGGATCTCAATTGTCTGTGTTCATTCCACAGTACTCAGTCTTTCATTTTTCACAATCTTTTGTTCGCAGAAAGCGGAGCTCTGGATGATAATTCATGTAGACCAGATTTTGTTGGAGAGCAGATGGACCTTGCAGAGGTTCCTCAGTACATCAGAGAATATGACAGGGGCAAAGATTTGGAGATGTGGAAGATAATGTACAACCCAAATCCAGAATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA023334

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA023334&oldid=45859"