BGIOSGA023365

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Revision as of 13:31, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA023365| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA023365, complete gene.| tag = OsI_238...")
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Gene Name

BGIOSGA023365

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA023365, complete gene.

LocusTag

OsI_23895

Ensembl Transcript ID

BGIOSGA023365-TA

Ensembl Protein ID

BGIOSGA023365-PA

Length

4711

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:27765126..27769836

Sequence Coding Region

27765126..27766770,27767209..27767357,27767436..27767504,27767587..27767739,27767813..27767976
,27768093..27768240,27769234..27769356,27769446..27769533,27769667..27769836

Genome Context

<gbrowseImage1> name=IndicaChromosome06:27765126..27769836 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:27765126..27769836 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGATCGAGGAGTATGACAAGCTGGCCGGCGCGAGCCCCAAGCTGAGGGTGTTCATCTTCCCCATCTCCGACGCGGCGGGCGGTGGCGGCGGGGAGGAGGCGGAGGGCGGGGGATTCGATGCCGGGCTCCGGTATCTGGAGGCGGTGAACGGTATTGTGCGCAAGGACAGCGTCGCGAGCCTCTCGTCGACGCAGAACTCCGATGGTGGGCCGCCTCCGCCGGCGCCGACTTCGGGTGGTGGCGGCGGCGGCGGCGGTTCTCCGACCGCGCTCTCCCCCACCTCTACTTGCTCGAATGATGCCGCGAGATCGGCGTTTGGTGTGGCGGCGCCGCCACCGCTTGTTGATGTGTTCAGCAATGCCGCTGCTCCGGCTCCTGTCCCTGTGAAGCCACAGGAGATTGCTGCTGAAGTGAGGGCTCCACCGCAGGCGAATCCACAGCCGGAAGCAGCGAGGTACCGGCAGCCGCTGTCGCAGCTACCACCGTTGCCGCCTGTGTTCATGAACGATCATAGGGAGGCCATGCAGGGTCTGAATCAGGCGATGCCAGGAAATGGGGGAAGGCTGGAAGACTGCAATATGTGCTTGAAGGCACTTCCTCATGCTCACTCAGATCCAGTGGTGAATGACTACGGTAGCGATATGCATGGAGGGCCTGGCCCCGAGACGGTGCCGGTATACATGAGCCTGCGGCCAGAAGACGTGGCAAGGATTATGATGCCGGAGAGGGCGGTGCCAGTTCCGATGGGGGCTTATGGGTACACCCATATGCATCCCGTGCCGCATGAGAGGGAGATGATGTATGCGCAGCAGGTTGAAGGGATTCCGAACACAGTGCTCATTGACCCATCTGGCTTGCATCAGCATGTGTATGTTCATCAGCAGCAGCAAGTTCCACCACAGCAGTTGCCTTCAACCTATGGATTTAACCAGATCCCTGTGATTCCAAATGAGAAGGACAGAGTAGTTTCTCCAGGTTCGGCTCATTCTGATATCTCAAGCTCTCATCAACACATTATGCAGCAGCCGCTGCCACCGCAGCAGCAGCAGCAATTGCCTTCAGGCCAAGGAATGGCACAATATCCCGTCAAGCAAAATAGTCCAAACAATCAGCTTACAGGTGAGGGTAGCCTAAGTGGCAATGCAAGGCATCGTGAGGATGGACTGACGCGCCGTGATAATGTGTCCCCAGTGGCACCTGCTGCTGTGCCGACTTATATGGCTAATGTGGACAGGATGATGGATTCGCTCCGCTTGAGCCCTAGTGAGGCCAGTTCTGCCTCTACTGAACAAAGAAAGCCAGTGATGCCTCCTGAGAATGGTGTACCCCAGAATGCCATACCAGAACACTCTCAGGGGTTCCCAGATACTCGAGCAAGAGAGGTTAGTCAGAGCAACACCAACACCTTTTTTGATGTCAGTGAACCTAAGGTAGTCCTTCCAACTGAACCAGCACTATCACCTTCCATTGCCAGCTCTTATTTGCACAATGTTCAGCACACCAATGTGAGCCATATGCCACATATGATGAGCATCGGGGGTCCCTACTCGAGTTATGTTGTAGCTACGGTTGGGCCTGGTGGAGTGCCTCCATCGGCTTATGGTGTTGATCTTGTCTATGCAAATTCTGCTGTAAATCCATTAAGTGATGATATGACCAGCCCAGATTTGGTAAGTGTCGAGGACAGTTTACCTACATCTAATACAAAGTCATCAGAGCCTCAGCCTCCTGTGGTGAATGATGGAGTTGGTGCTGTCACTGGTAAAGTAGATGCTGAAGCACACGTCAATGAGGTTAACAAGAGCAGACCAGCAGATTGGATTTCAGGTTTTCCAGCTACTGATGATCTTGGACGTCTGCAGATTATAAAGAATAATGACCTTGAAGAGCTCCAAGAACTTGGTTCTGGAACTTTTGGAACCGTATATCATGGTAAATGGAGGGGATCTGATGTTGCTATTAAAAGAATCAATGACAGATGTTTTGCTGGGAAGCCATCAGAGCAAGACAAGATGCGGAATGACTTTTGGAATGAAGCATCTAAACTTGCTGATCTACACCACCCAAATGTCGTGGCCTTTTATGGTGTTGTTCTTGATGGACCTGGGGGATCAATTGCCACTGTTACTGAATACATGGTTAATGGTTCACTCAGAACAGCTTTGCTGAAGAATGCCAAGACCCTGGATAAGCGTAAGAGATTGATAATTGCCATGGATACTGCTTTCGGAATGGAGTATTTGCATAACAAAAACATAGTGCACTTTGACCTGAAAAGTGACAATTTGCTTGTTAATTTAAGGGATCCTCAGCGTCCAATATGCAAGGTTGGTGATCTTGGACTTTCAAAAGTAAAATGTCAGACCCTCATCTCTGGTGGTGTGAGGGGGACTCTTCCATGGATGGCTCCAGAACTTCTGAATGGAAGTAGCAGCTTGGTCTCCGAAAAGGTTGATGTGTTCTCCTTTGGGATTGTTCTCTGGGAACTCTTAACAGGAGAAGAACCATACGCAGATCTGCATTATGGTGTTATTATAGGTGGCATTGTGAGCAACACTCTACGACCAGCAGTACCTGACTCTTGTGATCCAGAGTGGAGATCACTAATGGAGCAATGTTGGTCGACAGAACCATCCGAACGGCCAACCTTTACGGAGATTGCTGGTAGGTTACGCTCCATGGCTGCATCCCATAAGGTGCAACCCTGA</cdnaseq>

Protein Sequence

<aaseq>MIEEYDKLAGASPKLRVFIFPISDAAGGGGGEEAEGGGFDAGLRYLEAVNGIVRKDSVASLSSTQNSDGGPPPPAPTSGGGGGGGGSPTALSPTSTCSNDAARSAFGVAAPPPLVDVFSNAAAPAPVPVKPQEIAAEVRAPPQANPQPEAARYRQPLSQLPPLPPVFMNDHREAMQGLNQAMPGNGGRLEDCNMCLKALPHAHSDPVVNDYGSDMHGGPGPETVPVYMSLRPEDVARIMMPERAVPVPMGAYGYTHMHPVPHEREMMYAQQVEGIPNTVLIDPSGLHQHVYVHQQQQVPPQQLPSTYGFNQIPVIPNEKDRVVSPGSAHSDISSSHQHIMQQPLPPQQQQQLPSGQGMAQYPVKQNSPNNQLTGEGSLSGNARHREDGLTRRDNVSPVAPAAVPTYMANVDRMMDSLRLSPSEASSASTEQRKPVMPPENGVPQNAIPEHSQGFPDTRAREVSQSNTNTFFDVSEPKVVLPTEPALSPSIASSYLHNVQHTNVSHMPHMMSIGGPYSSYVVATVGPGGVPPSAYGVDLVYANSAVNPLSDDMTSPDLVSVEDSLPTSNTKSSEPQPPVVNDGVGAVTGKVDAEAHVNEVNKSRPADWISGFPATDDLGRLQIIKNNDLEELQELGSGTFGTVYHGKWRGSDVAIKRINDRCFAGKPSEQDKMRNDFWNEASKLADLHHPNVVAFYGVVLDGPGGSIATVTEYMVNGSLRTALLKNAKTLDKRKRLIIAMDTAFGMEYLHNKNIVHFDLKSDNLLVNLRDPQRPICKVGDLGLSKVKCQTLISGGVRGTLPWMAPELLNGSSSLVSEKVDVFSFGIVLWELLTGEEPYADLHYGVIIGGIVSNTLRPAVPDSCDPEWRSLMEQCWSTEPSERPTFTEIAGRLRSMAASHKVQP</aaseq>

Gene Sequence

<dnaseqindica>1..1645#2084..2232#2311..2379#2462..2614#2688..2851#2968..3115#4109..4231#4321..4408#4542..4711#ATGATCGAGGAGTATGACAAGCTGGCCGGCGCGAGCCCCAAGCTGAGGGTGTTCATCTTCCCCATCTCCGACGCGGCGGGCGGTGGCGGCGGGGAGGAGGCGGAGGGCGGGGGATTCGATGCCGGGCTCCGGTATCTGGAGGCGGTGAACGGTATTGTGCGCAAGGACAGCGTCGCGAGCCTCTCGTCGACGCAGAACTCCGATGGTGGGCCGCCTCCGCCGGCGCCGACTTCGGGTGGTGGCGGCGGCGGCGGCGGTTCTCCGACCGCGCTCTCCCCCACCTCTACTTGCTCGAATGATGCCGCGAGATCGGCGTTTGGTGTGGCGGCGCCGCCACCGCTTGTTGATGTGTTCAGCAATGCCGCTGCTCCGGCTCCTGTCCCTGTGAAGCCACAGGAGATTGCTGCTGAAGTGAGGGCTCCACCGCAGGCGAATCCACAGCCGGAAGCAGCGAGGTACCGGCAGCCGCTGTCGCAGCTACCACCGTTGCCGCCTGTGTTCATGAACGATCATAGGGAGGCCATGCAGGGTCTGAATCAGGCGATGCCAGGAAATGGGGGAAGGCTGGAAGACTGCAATATGTGCTTGAAGGCACTTCCTCATGCTCACTCAGATCCAGTGGTGAATGACTACGGTAGCGATATGCATGGAGGGCCTGGCCCCGAGACGGTGCCGGTATACATGAGCCTGCGGCCAGAAGACGTGGCAAGGATTATGATGCCGGAGAGGGCGGTGCCAGTTCCGATGGGGGCTTATGGGTACACCCATATGCATCCCGTGCCGCATGAGAGGGAGATGATGTATGCGCAGCAGGTTGAAGGGATTCCGAACACAGTGCTCATTGACCCATCTGGCTTGCATCAGCATGTGTATGTTCATCAGCAGCAGCAAGTTCCACCACAGCAGTTGCCTTCAACCTATGGATTTAACCAGATCCCTGTGATTCCAAATGAGAAGGACAGAGTAGTTTCTCCAGGTTCGGCTCATTCTGATATCTCAAGCTCTCATCAACACATTATGCAGCAGCCGCTGCCACCGCAGCAGCAGCAGCAATTGCCTTCAGGCCAAGGAATGGCACAATATCCCGTCAAGCAAAATAGTCCAAACAATCAGCTTACAGGTGAGGGTAGCCTAAGTGGCAATGCAAGGCATCGTGAGGATGGACTGACGCGCCGTGATAATGTGTCCCCAGTGGCACCTGCTGCTGTGCCGACTTATATGGCTAATGTGGACAGGATGATGGATTCGCTCCGCTTGAGCCCTAGTGAGGCCAGTTCTGCCTCTACTGAACAAAGAAAGCCAGTGATGCCTCCTGAGAATGGTGTACCCCAGAATGCCATACCAGAACACTCTCAGGGGTTCCCAGATACTCGAGCAAGAGAGGTTAGTCAGAGCAACACCAACACCTTTTTTGATGTCAGTGAACCTAAGGTAGTCCTTCCAACTGAACCAGCACTATCACCTTCCATTGCCAGCTCTTATTTGCACAATGTTCAGCACACCAATGTGAGCCATATGCCACATATGATGAGCATCGGGGGTCCCTACTCGAGTTATGTTGTAGCTACGGTTGGGCCTGGTGGAGTGCCTCCATCGGCTTATGGTGTTGATCTTGTCTATGCAAATTCTGCTGTAAATCCATTAAGTGAGCGCAAGGATGTTCCACATGAAGTAGCTCCAAATGCTAATGCTCAGGTACCTGCAGCAGCATTGGTAAATCATGCTCCCAATGTGGACCAAATCCAAGAGTCTGGCTTACAAGGCCAGCAATTTGGCATGACGACCCCTGGAAAGTAGTAACAGATACACATGCTTTGCCTCCGAGACCTAAGAGGGTAGCAGCGGGAAGACATCAGCCCGAAGATCCACATTCTCACACCTCTTATTAAACTGCAAAGGGCCAGATCTGAATATTCCGGCTGAAGATGTTGCTCTCCACCAACAATCAGATCACAAGGACGCCCATACAGAGCTTGGTCGATTCATCAAAGGTTGTCTGCTTAACCATATTTCCTGATAAAACCTTGTCAATATATGTACTTGTAAGTTGTGAATCTTATTTCTGCATATCGCATCAATCCAGGTGATGATATGACCAGCCCAGATTTGGTAAGTGTCGAGGACAGTTTACCTACATCTAATACAAAGTCATCAGAGCCTCAGCCTCCTGTGGTGAATGATGGAGTTGGTGCTGTCACTGGTAAAGTAGATGCTGAAGCACACGTCAATGAGGTTAATATATAATTTCTTACTTTCTCAGATGTGTCCTTATTCATGTCATCCTTAATGCTAAGCAAGAGAATCATGCAGGTTAACAAGAGCAGACCAGCAGATTGGATTTCAGGTTTTCCAGCTACTGATGATCTTGGACGTCTGCAGGTTACTTTCGTGAACTATAGCTTTTTAATCGTGCAAATCTTTGATAGTTAGTTCTGTTACCAATCAAATGTTTATGTTGCAGATTATAAAGAATAATGACCTTGAAGAGCTCCAAGAACTTGGTTCTGGAACTTTTGGAACCGTATATCATGGTAAATGGAGGGGATCTGATGTTGCTATTAAAAGAATCAATGACAGATGTTTTGCTGGGAAGCCATCAGAGCAAGACAAGATGGTTAGTTCTCACACTTCAGATTGTTATGTTTGGCTATGCTGTCTTTGCATTGATATATCCTGGATTACTGCAGCGGAATGACTTTTGGAATGAAGCATCTAAACTTGCTGATCTACACCACCCAAATGTCGTGGCCTTTTATGGTGTTGTTCTTGATGGACCTGGGGGATCAATTGCCACTGTTACTGAATACATGGTTAATGGTTCACTCAGAACAGCTTTGCTGAAGAATGCCAAGTATGTCCCTTTACACCCAGAGTTATCTTCTGCTTTGATCTGTTACATCCTAATGTCTAATGCACATAAAATTGGTGGTCTTGCATGGTGTTGATTGAATCAAATTATCTGTGCAGGACCCTGGATAAGCGTAAGAGATTGATAATTGCCATGGATACTGCTTTCGGAATGGAGTATTTGCATAACAAAAACATAGTGCACTTTGACCTGAAAAGTGACAATTTGCTTGTTAATTTAAGGGATCCTCAGCGTCCAATATGCAAGGTAAGCAGCAGGCTCCATTTGTTTTTATTAGATTGCTACATCGTGTTGCTAAATTATTATGATTTCCCTTATCTGTAATATTTGTGGTACTTGATATTAGGTAATTTAGGCAGTATGTCCTATATTGTCCTTTTAAACTGGGTACTCATGGTAATTTTTAGCATTATTATCCCACATTCTTGTAAATTTACTTCTTAGGAGCATATGGTGTCCGCTGTTCTGATCCAGATAGATATCTAGTTTGCCTGGTACAGAATTGCTGTTAGTACTGAATGATTATATCTGCTTGGTTGGAACCTGCTGCCGCTTGGGCATCTTCCGCTGCAGCTTCATGGAGCATGACATATGTATGATAGGATGATGGAGCAGCTCTGATATTTGTTTTCTTATATGTTAGTAAGACACAAATGGTGGCATGGGTACACGATCTGATAAGAGGAAGTTTCTAAAAGTTTAACTACTTGATATAACTTGAGATTATAAACATCTGCTTTCTAGTAAAGACCTCTCTGTACAAATTCTTGAGCCTGCTTGTTTGTCATCTTAGTTTGTACTCCCTCCGTCCCAATATAAGTGCAACCTAGTACGGATGTGATATACCCTATGACTAGGAATCTGGATAGGCAACTGTCCAGATTCGTAATCCTAGGATATGTCACATCATTGTCTATCCAGATTCCTAGCCCTAGGATATGTCACATCAGTACTAGGTTTGCACTTATATTGGGACGGAGGGAGTATTCTTTTAGTTGATCGACTAGCGTTCTTTGTTGAATTTTCTATGAAACACTTAGCAGCATTTGCTTTTAACACCTTGAAATGTCACCAGGCATTTGCAAATGTGGCTGGACTGATATATTGCTGATGCAAACTTCCAGCAAATTTCATTTTACTTGTGCCAACAAAGTGACCTTTTGAAAATATAATTAGGTGACTGGTGTCCTTTCCCCTATATATTTAGCTATTTTGTAATAATTTTCTTCGATGATGTAGGTTGGTGATCTTGGACTTTCAAAAGTAAAATGTCAGACCCTCATCTCTGGTGGTGTGAGGGGGACTCTTCCATGGATGGCTCCAGAACTTCTGAATGGAAGTAGCAGCTTGGTCTCCGAAAAGGTCTACATATTGATTGTGTCATATTATCATTTGACCTGCTACATTCATGTCCATATTAAACTAACATTAACGTTGCCTTGGTGCCTCAGGTTGATGTGTTCTCCTTTGGGATTGTTCTCTGGGAACTCTTAACAGGAGAAGAACCATACGCAGATCTGCATTATGGTGTTATTATAGGTTGGTCTTGATTTCCCATTTCAGATTTTACATGATCCTTATCTGATACTGTCGTAGGAATTATACGTGCAATATAGATGGACAAAGATGATTTGATTGCCAAGCTTGATGTAAAATTTTCTACTCTTGGCAGGTGGCATTGTGAGCAACACTCTACGACCAGCAGTACCTGACTCTTGTGATCCAGAGTGGAGATCACTAATGGAGCAATGTTGGTCGACAGAACCATCCGAACGGCCAACCTTTACGGAGATTGCTGGTAGGTTACGCTCCATGGCTGCATCCCATAAGGTGCAACCCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA023365