Os11g0628000

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Revision as of 09:17, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0628000| Description = Protein kinase-like domain containing protein| Version = NM_001189737.1 GI:297728604 GeneID:9272400| Length = 3466 b...")
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Gene Name

Os11g0628000

Description

Protein kinase-like domain containing protein

Version

NM_001189737.1 GI:297728604 GeneID:9272400

Length

3466 bp

Definition

Oryza sativa Japonica Group Os11g0628000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:26458742..26462207

Sequence Coding Region

26458742..26461694,26461843..26462207

Expression

GEO Profiles:Os11g0628000

Genome Context

<gbrowseImage1> name=NC_008404:26458742..26462207 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:26458742..26462207 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgatatctccccagcttctcctacttctggccttcttccatttcctgagcccataccttccgctatctgcttttgcgcaatttcgcaatgattccagtgctgatcgactagccctcctctgcctcaagtcccagctccttgacccctctggagcgttaacctcatggggaaatgaatccctttcaatctgcaattggaacggagttacatgcagcaagcgcgatccatctcgagttgttgctttagacctcgagtcacagaatattacaggcaaaatatttccttgtgttgcaaacctcagtttcatctctagaattcacatgcccggtaaccatctcaatggccaaatttctcctgagattggccgcttaacccaccttacattccttaatctcagcatgaattcccttagtggtgagataccggagactatatcatcatgttcccatctcgagattgtcatcctgcatagaaactccctttcaggtgagatccctcgaagtcttgctcagtgtttatttcttcagcaaattattctaagcaataaccatattcaaggaagcatccctccagagattggtctcctttccaacctttctgcactatttattcgtaacaatcaactcactggcaccattcctcaactattagggagtagcagatcacttgtctgggtgaatctccagaataacagcttaactggggagatacccaattccctgttcaattgcactaccatttcttacatagatctctcatataatggtctatctgggtctattcctccattctcacaaacatcttcatcgctacgataccttagcttaactgaaaaccacctctctggtgtgatacctaccttagttgataaccttccattgttgtccacactgatgcttgctagaaacaacttggaaggaacaattccagatagcctaagtaaactttctagtttacaaacactagacctaagttataataatttgtcaggtaatgttccgctaggactatacgcaatttcaaatcttacctatcttaactttggtgccaaccaatttgtagggagaattcccaccaatattggctatacccttccaggactcacaagtataattctagaagggaaccagtttgagggaccgattcctgcttcgttggccaatgccttgaatctccaaaatatatattttcgaaggaactcattcgatggtgttattcctccattaggatccctgtccatgttgacttatttagatctaggtgacaataagcttgaggctggagattggactttcatgtcctcactaacaaactgcacccaactacaaaatttgtggttggacagaaacaatctccaaggaataataccatcatctatttccaacctttctgaaagcctaaaggtattgatcctaatacagaacaaattgactggtagcataccttccgagatagaaaaactcagtagcctcagtgtccttcaaatggatagaaattttctttctggccaaattcctgacacactagtaaatcttcaaaacttgtcaatcctaagtttgtccaacaacaagctttctggagagatcccacgatcaattggaaaattagagcagcttactaaactttatcttcaggataatgatttaacagggaaaataccttctagtttagccagatgcacaaatttggcaaaactaaacctttctagaaattaccttagtggaagcattccatcaaaactattttccatttcgacactttcagaaggtttagacatatcctataatcaactaaccggacatataccactggagattggtaggttgattaatcttaattcacttaacatctcacacaaccaattatctggtgagattccctcttctcttgggcagtgccttctgttggaatccatcagcttggagtcaaattttctacaaggaagcatcccagaatctcttataaacttaagaggcatcacggagatggatctttcccaaaacaacttatctggtgaaatcccaatatattttgagacttttggatctctacacactctcaatctgtccttcaataaccttgagggaccagtccctaaaggaggtgtgtttgcaaatttaaacgatgtgtttatgcaaggaaataaaaagttgtgtggaggttctccaatgctacatttaccactttgcaaggatttgtcatccaaaaggaaaaggacaccttatattcttggtgtagtcattccaatcactaccattgttatagtcaccttggtatgtgttgccatcattcttatgaagaagagaactgaaccaaagggaaccattatcaaccattcattcaggcattttgataagttatcgtacaatgatctgtacaaagcaactgatggtttctcttcaacaaatcttgttggttcgggaacatttggattcgtatataaaggtcagttgaagtttgaagcacgcaatgttgcaattaaagtttttagacttgaccgaaatggagcaccaaacaacttttttgctgaatgtgaggcattgaaaaacattcgccaccggaatcttataagagtcattagcctatgctcaacatttgatccatcaggaaatgaattcaaagcacttattcttgagtttaggagcaatgggaacctcgaaagctggattcatccaaaagtgtacagtcaaagccctcaaaaacggttgagtttgggttcaagaattagaatagctgtagatattgcagctgcattagactatcttcataatcgatgcactccttctttggttcattgtgatctgaaaccaagcaatgtccttttggatgatgaaatggttgcatgtcttagcgactttggacttgcaaagtttcttcacaatgacattataagcctggaaaattcatcaagctctgctgtactgagaggatcaattggatacattgctccagagtatggcttggggtgcaaggtctcaactgagggtgatgtatacagttttggaataattgtcctagagatgatcacaggaaagcgcccaaccgatgagatctttaaggatggcatgaaccttcacagcttagtggagtcagcatttccacatcagatgaatgacattttagaacctactctcaccacatatcatgaaggtgaagaaccaaatcatgatgtgcttgaaatacaaacgtgtgccatacagctggctaagcttgcgctgctgtgcactgagccatcaccaaaagatcgaccaacaatagatgatgtttacgctgagatcatttccatcaacgacaagtattgtgcactgatcaactga</cdnaseq>

Protein Sequence

<aaseq>MISPQLLLLLAFFHFLSPYLPLSAFAQFRNDSSADRLALLCLKS QLLDPSGALTSWGNESLSICNWNGVTCSKRDPSRVVALDLESQNITGKIFPCVANLSF ISRIHMPGNHLNGQISPEIGRLTHLTFLNLSMNSLSGEIPETISSCSHLEIVILHRNS LSGEIPRSLAQCLFLQQIILSNNHIQGSIPPEIGLLSNLSALFIRNNQLTGTIPQLLG SSRSLVWVNLQNNSLTGEIPNSLFNCTTISYIDLSYNGLSGSIPPFSQTSSSLRYLSL TENHLSGVIPTLVDNLPLLSTLMLARNNLEGTIPDSLSKLSSLQTLDLSYNNLSGNVP LGLYAISNLTYLNFGANQFVGRIPTNIGYTLPGLTSIILEGNQFEGPIPASLANALNL QNIYFRRNSFDGVIPPLGSLSMLTYLDLGDNKLEAGDWTFMSSLTNCTQLQNLWLDRN NLQGIIPSSISNLSESLKVLILIQNKLTGSIPSEIEKLSSLSVLQMDRNFLSGQIPDT LVNLQNLSILSLSNNKLSGEIPRSIGKLEQLTKLYLQDNDLTGKIPSSLARCTNLAKL NLSRNYLSGSIPSKLFSISTLSEGLDISYNQLTGHIPLEIGRLINLNSLNISHNQLSG EIPSSLGQCLLLESISLESNFLQGSIPESLINLRGITEMDLSQNNLSGEIPIYFETFG SLHTLNLSFNNLEGPVPKGGVFANLNDVFMQGNKKLCGGSPMLHLPLCKDLSSKRKRT PYILGVVIPITTIVIVTLVCVAIILMKKRTEPKGTIINHSFRHFDKLSYNDLYKATDG FSSTNLVGSGTFGFVYKGQLKFEARNVAIKVFRLDRNGAPNNFFAECEALKNIRHRNL IRVISLCSTFDPSGNEFKALILEFRSNGNLESWIHPKVYSQSPQKRLSLGSRIRIAVD IAAALDYLHNRCTPSLVHCDLKPSNVLLDDEMVACLSDFGLAKFLHNDIISLENSSSS AVLRGSIGYIAPEYGLGCKVSTEGDVYSFGIIVLEMITGKRPTDEIFKDGMNLHSLVE SAFPHQMNDILEPTLTTYHEGEEPNHDVLEIQTCAIQLAKLALLCTEPSPKDRPTIDD VYAEIISINDKYCALIN</aaseq>

Gene Sequence

<dnaseqindica>1..2953#3102..3466#atgatatctccccagcttctcctacttctggccttcttccatttcctgagcccataccttccgctatctgcttttgcgcaatttcgcaatgattccagtgctgatcgactagccctcctctgcctcaagtcccagctccttgacccctctggagcgttaacctcatggggaaatgaatccctttcaatctgcaattggaacggagttacatgcagcaagcgcgatccatctcgagttgttgctttagacctcgagtcacagaatattacaggcaaaatatttccttgtgttgcaaacctcagtttcatctctagaattcacatgcccggtaaccatctcaatggccaaatttctcctgagattggccgcttaacccaccttacattccttaatctcagcatgaattcccttagtggtgagataccggagactatatcatcatgttcccatctcgagattgtcatcctgcatagaaactccctttcaggtgagatccctcgaagtcttgctcagtgtttatttcttcagcaaattattctaagcaataaccatattcaaggaagcatccctccagagattggtctcctttccaacctttctgcactatttattcgtaacaatcaactcactggcaccattcctcaactattagggagtagcagatcacttgtctgggtgaatctccagaataacagcttaactggggagatacccaattccctgttcaattgcactaccatttcttacatagatctctcatataatggtctatctgggtctattcctccattctcacaaacatcttcatcgctacgataccttagcttaactgaaaaccacctctctggtgtgatacctaccttagttgataaccttccattgttgtccacactgatgcttgctagaaacaacttggaaggaacaattccagatagcctaagtaaactttctagtttacaaacactagacctaagttataataatttgtcaggtaatgttccgctaggactatacgcaatttcaaatcttacctatcttaactttggtgccaaccaatttgtagggagaattcccaccaatattggctatacccttccaggactcacaagtataattctagaagggaaccagtttgagggaccgattcctgcttcgttggccaatgccttgaatctccaaaatatatattttcgaaggaactcattcgatggtgttattcctccattaggatccctgtccatgttgacttatttagatctaggtgacaataagcttgaggctggagattggactttcatgtcctcactaacaaactgcacccaactacaaaatttgtggttggacagaaacaatctccaaggaataataccatcatctatttccaacctttctgaaagcctaaaggtattgatcctaatacagaacaaattgactggtagcataccttccgagatagaaaaactcagtagcctcagtgtccttcaaatggatagaaattttctttctggccaaattcctgacacactagtaaatcttcaaaacttgtcaatcctaagtttgtccaacaacaagctttctggagagatcccacgatcaattggaaaattagagcagcttactaaactttatcttcaggataatgatttaacagggaaaataccttctagtttagccagatgcacaaatttggcaaaactaaacctttctagaaattaccttagtggaagcattccatcaaaactattttccatttcgacactttcagaaggtttagacatatcctataatcaactaaccggacatataccactggagattggtaggttgattaatcttaattcacttaacatctcacacaaccaattatctggtgagattccctcttctcttgggcagtgccttctgttggaatccatcagcttggagtcaaattttctacaaggaagcatcccagaatctcttataaacttaagaggcatcacggagatggatctttcccaaaacaacttatctggtgaaatcccaatatattttgagacttttggatctctacacactctcaatctgtccttcaataaccttgagggaccagtccctaaaggaggtgtgtttgcaaatttaaacgatgtgtttatgcaaggaaataaaaagttgtgtggaggttctccaatgctacatttaccactttgcaaggatttgtcatccaaaaggaaaaggacaccttatattcttggtgtagtcattccaatcactaccattgttatagtcaccttggtatgtgttgccatcattcttatgaagaagagaactgaaccaaagggaaccattatcaaccattcattcaggcattttgataagttatcgtacaatgatctgtacaaagcaactgatggtttctcttcaacaaatcttgttggttcgggaacatttggattcgtatataaaggtcagttgaagtttgaagcacgcaatgttgcaattaaagtttttagacttgaccgaaatggagcaccaaacaacttttttgctgaatgtgaggcattgaaaaacattcgccaccggaatcttataagagtcattagcctatgctcaacatttgatccatcaggaaatgaattcaaagcacttattcttgagtttaggagcaatgggaacctcgaaagctggattcatccaaaagtgtacagtcaaagccctcaaaaacggttgagtttgggttcaagaattagaatagctgtagatattgcagctgcattagactatcttcataatcgatgcactccttctttggttcattgtgatctgaaaccaagcaatgtccttttggatgatgaaatggttgcatgtcttagcgactttggacttgcaaagtttcttcacaatgacattataagcctggaaaattcatcaagctctgctgtactgagaggatcaattggatacattgctccaggtaaggacttttcattcttattcgttcgtttctacagcttccacattatctgtcacggaggtgatgggcaatcccattccatagaatcaagtattatatttcgactgacagatattttattaagtaacttggtcaatctttgttgcagagtatggcttggggtgcaaggtctcaactgagggtgatgtatacagttttggaataattgtcctagagatgatcacaggaaagcgcccaaccgatgagatctttaaggatggcatgaaccttcacagcttagtggagtcagcatttccacatcagatgaatgacattttagaacctactctcaccacatatcatgaaggtgaagaaccaaatcatgatgtgcttgaaatacaaacgtgtgccatacagctggctaagcttgcgctgctgtgcactgagccatcaccaaaagatcgaccaacaatagatgatgtttacgctgagatcatttccatcaacgacaagtattgtgcactgatcaactga</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0628000, RefSeq:Os11g0628000