BGIOSGA023421

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Revision as of 13:32, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA023421| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA023421, complete gene.| tag = OsJ_222...")
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Gene Name

BGIOSGA023421

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA023421, complete gene.

LocusTag

OsJ_22274

Ensembl Transcript ID

BGIOSGA023421-TA

Ensembl Protein ID

BGIOSGA023421-PA

Length

6596

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:29133320..29139915

Sequence Coding Region

29133320..29133638,29135193..29135619,29136577..29136794,29137700..29137788,29137965..29138034
,29138228..29138311,29138415..29138491,29138602..29138683,29138806..29138888
,29138972..29139035,29139209..29139337,29139609..29139712,29139811..29139915

Genome Context

<gbrowseImage1> name=IndicaChromosome06:29133320..29139915 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:29133320..29139915 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGAGGAGGGCGCCATGGCTCGCCGGGATTGGGGCCGTGCCGTTCTTGATCGTCGTCGTGGTGGCGGTGGTGGGCGCCGCCGTGCCGGCGATGGGGAGGTTCGTGGTGGAGAAGAGCAGCGTGAGGGTGCTCTCGCCGGAGCACATCCGGGGGCACCACGACGCCGCCATCGGCAACTTCGGCGTGCCGGACTACGGCGGCACGCTCACCGGCGTCGTCGTCTACCCCGACAAGAAGGCCACCGGCTGCGCCGAGTTCGACGCCAAGTTCAAGTCCAAGTCTCGCCGCCCGGTCATCCTCCTGCTCGACCGTGGAGAGTGCTACTTCGCGCTGAAGGCGTGGAACGCGCAGCAGGCGGGCGCGGCGGCGGTGCTGATCGCGGACAACGTGGACGAGCAGCTGCTGACGATGGACACGCCGGAGGAGTCGCCGGAGACGGAGTACATCGACCGGATCAGCATCCCGTCCGCGCTGGTCAACCGCGCGTTCGGCGAGTCCCTCAAGAGGATGTCGTCGCCGTCGCCGTCGTCAGAGGCGGCGGTGGAGGTGGTGGTGAAGCTGGACTGGCGCGAGTCGATGCCCCACCCCGACGAGCGGGTGGAGTACGAGCTGTGGACCAACAGCAACGACGAGTGCGGCGCCCGGTGCGACGAGCAGATGGAGTTCGTCCGCGGCTTCCGCGGCCACGCCCAGATCATGGAGAGAGGTGGCTACGCCCTCTTCACCCCGCACTACATCACCTGGTATTGTGCGCCGGACCCGGAGCAGGATTTCGGGGAGGGGTACGAGGGGAAGGACGTGGTGGTGGAGAACCTGAGGCAGCTGTGCGTGCACCGGGTGGCCAACGAGACCGGGCGGCCATGGGCGTGGTGGGACTACGTCATGGACTACAAGATCAGGTGCTCCATGAAGGAGAAGAAGTACAGCAAGGGCTGCGCCGAGGACGTCGTCAAGGCCCTAGGTCTGTCGCTTGACAAGGTGCTGGAATGTATGGGCGATCCAGAGGCCGACACCGACAACGCCGTCTTGGCCAAAGAGCAGGAAGATCAGATTGGCCGTGGATCGCGAGGGGATGTGACCATCTTGCCTACTCTCGTCATCAACAACGTCCAGTACAGAGGGAAACTGGAGAGGACGGCCGTGCTGAAAGCTGTCTGTGCCGGCTTCAAGGAGGGCACTGAACCTCGCGTCTGCTTGAGCAATGATATCGAGACGAACGAGTGCCTGCACAGGAACGGCGGTTGCTGGAGAGACGAGAAAACCAACGTTACGGCTTGCAAGGACACGTTCAGGGGTAGGGTGTGCGAGTGCCCAGTGGTGAATGGCGTCCAGTACGAGGGCGACGGGTACATCGGTTGCAAAGCTGTTGGGCCAGGCAGGTGTACGGTGGACAACGGAGGCTGCTGGTCAGAGACTAGGGGTCATCAGACGTTCTCTGCTTGCTCTGACACTGCATTGACTGGATGCCGATGCCCCCCGGGTTTCCAAGGAGATGGCCACAAATGTGAAGATTTGGATGAATGCAAGGAGAAGCTTGCGTGCACTTGCCCTAACTGCCACTGCAAGAACACCTGGGGCAACTACGAGTGCAAGTGCAAGGGCAACCAGATCTACATAAGAGGAGAGGACACATGCATAGCCAACAGCATGTCAAGGTTCGGCTGGTTCATCACTATATTGGTGGTGTCGTGCGTAGCCGGCGTGGGGATTGCCGGCTATGTGTTCTACAAGTACAGACTCAGGTCGTACATGGACTCGGAGATCATGGCCATCATGTCCCAGTACATGCCGCTTGACAGCCAGAACAACGAGAACCAACCCCTTCGACAGCATGATTCAGAGGCTTAA</cdnaseq>

Protein Sequence

<aaseq>MARRAPWLAGIGAVPFLIVVVVAVVGAAVPAMGRFVVEKSSVRVLSPEHIRGHHDAAIGNFGVPDYGGTLTGVVVYPDKKATGCAEFDAKFKSKSRRPVILLLDRGECYFALKAWNAQQAGAAAVLIADNVDEQLLTMDTPEESPETEYIDRISIPSALVNRAFGESLKRMSSPSPSSEAAVEVVVKLDWRESMPHPDERVEYELWTNSNDECGARCDEQMEFVRGFRGHAQIMERGGYALFTPHYITWYCAPDPEQDFGEGYEGKDVVVENLRQLCVHRVANETGRPWAWWDYVMDYKIRCSMKEKKYSKGCAEDVVKALGLSLDKVLECMGDPEADTDNAVLAKEQEDQIGRGSRGDVTILPTLVINNVQYRGKLERTAVLKAVCAGFKEGTEPRVCLSNDIETNECLHRNGGCWRDEKTNVTACKDTFRGRVCECPVVNGVQYEGDGYIGCKAVGPGRCTVDNGGCWSETRGHQTFSACSDTALTGCRCPPGFQGDGHKCEDLDECKEKLACTCPNCHCKNTWGNYECKCKGNQIYIRGEDTCIANSMSRFGWFITILVVSCVAGVGIAGYVFYKYRLRSYMDSEIMAIMSQYMPLDSQNNENQPLRQHDSEA</aaseq>

Gene Sequence

<dnaseqindica>1..319#1874..2300#3258..3475#4381..4469#4646..4715#4909..4992#5096..5172#5283..5364#5487..5569#5653..5716#5890..6018#6290..6393#6492..6596#ATGGCGAGGAGGGCGCCATGGCTCGCCGGGATTGGGGCCGTGCCGTTCTTGATCGTCGTCGTGGTGGCGGTGGTGGGCGCCGCCGTGCCGGCGATGGGGAGGTTCGTGGTGGAGAAGAGCAGCGTGAGGGTGCTCTCGCCGGAGCACATCCGGGGGCACCACGACGCCGCCATCGGCAACTTCGGCGTGCCGGACTACGGCGGCACGCTCACCGGCGTCGTCGTCTACCCCGACAAGAAGGCCACCGGCTGCGCCGAGTTCGACGCCAAGTTCAAGTCCAAGTCTCGCCGCCCGGTCATCCTCCTGCTCGACCGTGGAGGTAGGAGATTGATTTCAAACTTCCAATGATTGATTCAATTAGTTTGTGCTTGTTTTGATTTGCATAAGTATTTTTCAAGAAATTTGTGTTCCAAAGTCTGCAAGTCTGAACTGAACAAACTTGAGAAGTAGTATTAGTTTTTGATGATTATTTGGATTTTGAGAGTTTGGTTTGGTGATGATTTGATTCCAATGTTCTAAGTCATGCCAATTTTTGTTCTGTTAATGGGTTGTGTCAATCCAATGGTTAGCTAGTCCACTGATTAAAAAAACAACAAAAGAAATGGTTAGCAAGAGAGTATCAAGGTAGGCATGATGGTTAAGTTGTATAGTATTTTAATTCTTTGATGTGGATTGTTGTCCAACTTTAGAAGTCTGAAAGATTGCATTCATATATATATATTTTTTATTGTGGCGAGGGAAGGGAATTTATAATTCAGTTCTGAAAGCAGAGTTGAACGATGGTAGACCAAAACTTTTTAATTTATTTTTGAAATTGTTTGAGAACTGAGATCACTTACTCCGAATCAAATTGTTTTGTTTGTTTCGCCTGGAAAAACAAGTCCAATATTGCAGAATACTACCTAACATAATATCAATAACTAGGACGGAATCTTAGTTCAGAGCCATTATTGAAGACATGTTAACCACTTCTTATTCACTACTTATAAGATTCAAACACACACTTAGTTTAATTACTTTCGGGATTCGGCTCAACTTTAAGCATTTCGACGAGTTTGTTCCTTTCTTTCCGTCAGAGTTTCAGATAACTCTGAACCAAGGAAAGCGAGAATAGGTTCTTGATACATATGCCGTACATTTATCCATTGTAACTTTGAATTTTGAATCTCATACCTGATTCGGTATTTGATCCAACCACTGCAACGCACTTGATCACAACTCCTCCACTACCAATCAGCAGGTGTCTCTCAATTCCTTCAAGCCAAAGGCAGCACTGAACAACCTGTTCATCCTTCGTTTCCAAGCCACTCTCCATCAGATTCTGAACTCTGCACCAGGACACTTTTACCATCAGATTATGAAATAGGAATTGCAAATTGACCCACTTATTCTGTACTAATATACTGAAATTCTCACTCAATTCAGTGCATTTTAGTTGCAATAAAGAAGAAGCAATTTTAATATTTTTAATGCAGATAATCAGCTTCATCGTTTGAATTTTTATTCTTTAACTTATCAGTCAACTATTTGAATTTTAAATCTTTATTTTAAGTATATTTTGGTTATTTTTTACCGTAATTTATTTTTCAGCATTAACTTTTAAATCGCTAAGAACATGTATATAAAAAATTTACCAATAAATTATTTTTAATCGCTAATAAACATTATGGTTTAATTTCTTTTGTCGGTGATAACCTTACATACTATGACTATGTGGGATGTAAGTGACCAACCCGCGAAATCCACTGTAGTAAATCAAAATAAACCACGAGCCCGTTTATTTTGACCTATAAGTGGGCTTACGCCGGGTTAGCCACTTACGCCCCCTGTATGTATGTGAGCCTGACAAACTGTTCCGTTTGTTGATATTCAGAGTGCTACTTCGCGCTGAAGGCGTGGAACGCGCAGCAGGCGGGCGCGGCGGCGGTGCTGATCGCGGACAACGTGGACGAGCAGCTGCTGACGATGGACACGCCGGAGGAGTCGCCGGAGACGGAGTACATCGACCGGATCAGCATCCCGTCCGCGCTGGTCAACCGCGCGTTCGGCGAGTCCCTCAAGAGGATGTCGTCGCCGTCGCCGTCGTCAGAGGCGGCGGTGGAGGTGGTGGTGAAGCTGGACTGGCGCGAGTCGATGCCCCACCCCGACGAGCGGGTGGAGTACGAGCTGTGGACCAACAGCAACGACGAGTGCGGCGCCCGGTGCGACGAGCAGATGGAGTTCGTCCGCGGCTTCCGCGGCCACGCCCAGATCATGGAGAGAGGTGGCTACGCCCTCTTCACCCCGCACTACATCACCTGGTACTGCCCCGAGGCCTTCAAGCTCACCCAGCAGTGCAAGTCCCAGTGCATCAACCATGGCAGGCAAGTGACTTCCTTCGTTTCAGATTATAAATCGTTTCGATTTCTTTTTTTTTAATCATACTTCCTTCATTTTATATTATTATTAAGTCGTTTTCACTTTTCTTATATCCGAACTTAAATTTGATTAAGTTTATAGAAAAATTAGTAACATCTACAACACCAAATTGGTTTCACTAAAACTAACATTTATGTATATTGATAATATTTTTCTTTTGTGTCGTAAATGTTGCTAAGTTTTCTATAAATTTGGTTAAACTTAGACTACTTATAATATGAAGTACCTCTTTTTAAAAAAATATTGGACGTTGTTACTTTTTTTTACAAACCCCCTGATCATTCATTTTATTCAAAAAAAATTATGCAAATAAAAAAAGGCAAAATTGGTTATATAACATCGAAAGTTCACGTTTTTGGTTTTATAGCACCGAAAGTTACCGGTTCACTTTAAGAACACCCTAAGTTCACCATGTTCCCCTTTTTAACACTTCCGTCAATTCTCGATCGTTTTCCGTCCGTCTTGATCCAGCCACACACACGATATGACGTTTGTATCCCTCACAAGTACAAGTATAATGCATGTCAATGAGGGGTAGAAATGTCATATCATGTGTGTGGCTGGATCAATAACGATCAAGACGGACGGAAAAATTGATGGAAGTGCTAAAAACATTTGACGACAAATTAAGTTACAATGAAATAAATAGTGATTACATTTTTTTTTTCAATAAGGTGTATGATCAAACACATATAAAAAAAAAAAGTTAACGACGTCATACACTGAAAAACGGAAAGAGTATCATAGTATCCTCTTCTTCGTCTCCGGTGGGGACACCATCATGCGCCATGGATCGATGGAGTGGTTGATCGAGCTCCGGTGAGGATGGGTGCGTGCAGGTATTGTGCGCCGGACCCGGAGCAGGATTTCGGGGAGGGGTACGAGGGGAAGGACGTGGTGGTGGAGAACCTGAGGCAGCTGTGCGTGCACCGGGTGGCCAACGAGACCGGGCGGCCATGGGCGTGGTGGGACTACGTCATGGACTACAAGATCAGGTGCTCCATGAAGGAGAAGAAGTACAGCAAGGGCTGCGCCGAGGACGTCGTCAAGGCCCTAGGTGAGAATGAGATCCATGGTACCATACATTCAGTGTGCATATGCTCATCGATCAGTTCATCGTTCTTCGTTACTTGCTCTAATTTGCCATTACACGAAAGACGCACCTTGAGTATTATACTCCCTCCATCCCAAAATGATCATCATATATGTTTATGCATCAAGATCAAGGATAATTTAAATTGCATCAATCAAGACATCATATACACATTCTCTCACAATGTATGTATCGATTAAAACACCATGTCAATTACATCCTAGTATGTACAGATTCTCCCATGCTATATTAATTGTATTCCGATGAAATTCATGTCCATGCAATTATATGATGATCAATTTAAGAAAATTTAGATTTCTTTATATGATGATCAATTTGGGAAGGAGGGAGTATTATGCATATCACACGCATGTACCTTGAGTATGTCTACAAAGATACAGAGGCCAGCAAAAAGTACTTAAATTCACTAATGGGAGTGGTTTATATTTATGACGTCATATTTTTCATCAAAAAATAGTTAAATCGTTTCGTGTATCAAACTAAAGCTGAATTGCACACATCTTACTACTATAAATCTGGATAAATATGAATACTAGGATGCGTCGGTTACTATATTTTAGAACGGATGTAGCATGTGCATATGTAACTTTTAGAAAAGATCCACTTTCCTAACTCCATATTAAAAACATACTGCATATGTAACTTTTCCAAAAGATCCGCTTTCCTAACTCCATATTAAAAACATATGTGCAATTGTGCATATGTAACTTTTCAAACCAGATCCACTTTCCTAACTCCGTATTAAAAACATATCCGCACATGCGTATTATCTGTAGACACTATGATTTGAATTTGGTGCTTTTATAATAGCAAATGTTCTTTTGTTCTTGACCTTTTTCTTTCCTTAGGTCTGTCGCTTGACAAGGTGCTGGAATGTATGGGCGATCCAGAGGCCGACACCGACAACGCCGTCTTGGCCAAAGAGCAGGAAGATCAGGTATATATGCAAAGTGACTGAAACTATACTGTTCATGGTGTCATTAGGAGAAGAATTTTTTTTAGCGTTTTAATCTTCAGGTGTCAGAGATGTTGGCCAGTCACAATCTCGCAGATCTCTTGCATTACATGATGTGTTAAGCCATTAACGTCGGTGGTTTTGGTGCCTTTGATCAGATTGGCCGTGGATCGCGAGGGGATGTGACCATCTTGCCTACTCTCGTCATCAACAACGTCCAGTACAGAGGTTGGTTGGCACATCTCTTTCTCCAAGAATGATAATTAAGAACAAATTAGTTACTTGCAAACACTGAAGCTGATTAGAGATTCCTAACAACAACAAAAATAGCTTTATGTAATAATTGACTGTAGCTCTTTGAGTTAAGACCGAGACGTTACATTCCATTATAAAAAAACAAAAATGGTTGTGAAAAATGAAGGGAAACTGGAGAGGACGGCCGTGCTGAAAGCTGTCTGTGCCGGCTTCAAGGAGGGCACTGAACCTCGCGTCTGCTTGAGCAATGGTGCGTAGAAAACGCAGAGAAACATATTGTTTTGTTTCGTGGAATTCTGAAAAATTGGAATGAAATTCTAATGAAATCTCTGTTTTCATTTCTTCAACCGTAGATATCGAGACGAACGAGTGCCTGCACAGGAACGGCGGTTGCTGGAGAGACGAGAAAACCAACGTTACGGCTTGCAAGGTACTACATGGTTTTATAGATTAATTGTATCATCTCGATGTAATTGTCTGATATCGATAAAGCTTTTTTAATCTGATTTTTTTTGGCGTCGTGTTCACAACAATACGCAGGACACGTTCAGGGGTAGGGTGTGCGAGTGCCCAGTGGTGAATGGCGTCCAGTACGAGGGCGACGGGTACATCGGTTGCAAAGGTATAGTTGGTCGATAGGCCATGAAAATTCTGTAAAATTCATGCATTCCAAAGGAACCTCGATTTCAGGCTCACCATGTTTTGAATTTTAATGTAATTGCATGTTTGTTCTTTTTGTTTCAGCTGTTGGGCCAGGCAGGTGTACGGTGGACAACGGAGGCTGCTGGTCAGAGACTAGGGGTCATCAGACGTTCTCTGCTTGCTCTGTAACTCTCTAGCCTTCACTTGCAGAAAAACCTCTCGTTGTTTGTTATGATCTTTGCTAATCACTCTCTGCACAATTTCATAGGACACTGCATTGACTGGATGCCGATGCCCCCCGGGTTTCCAAGGAGATGGCCACAAATGTGAAGGTAAACATATTTCTGAAACTTCTCTGAAGAAAAATAACTTCTGAAACTGACATATTGGCATACAATTACTACTGGACTATCAAGTGATTGATGGGCTAGTAGTGGTGGGTGTAGATTAACAGAACTGATGAAATACTGAACAAAATTCTGTGCTCCATGTGTTACCCTTTCAGATTTGGATGAATGCAAGGAGAAGCTTGCGTGCACTTGCCCTAACTGCCACTGCAAGAACACCTGGGGCAACTACGAGTGCAAGTGCAAGGGCAACCAGATCTACATAAGAGGAGAGGACACATGCATAGGTGATAATACATCACATAAAAATCTACTCCCTCCATTTCATAATGCAAGACTTTCTAGCATTTACCCACATTTATATGGATGTTAATGAATCTAGACACACACGTGTCTAAATTTATTAACATCTATACGAATGTGAGCAATGTTAAAAAGTCTTATATTATGAAACGGATAAAGTAAGATAGTTCCAATTTCATGTGACGATGGCATGAAACACTTTGCTTTTCGACATGAAAATATGAAACATAGCTAAATTTTGGGTTTATAATGCAGCCAACAGCATGTCAAGGTTCGGCTGGTTCATCACTATATTGGTGGTGTCGTGCGTAGCCGGCGTGGGGATTGCCGGCTATGTGTTCTACAAGTACAGACTCAGGGTATGTTTTTTTCTAACAAGAAAAGGAATATAATTAAACTGAAACTGTTGCAAGTATGTGATGTTGAAAAAGAAAAATGTTTGATGTGATTTGTGCAGTCGTACATGGACTCGGAGATCATGGCCATCATGTCCCAGTACATGCCGCTTGACAGCCAGAACAACGAGAACCAACCCCTTCGACAGCATGATTCAGAGGCTTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA023421