BGIOSGA023443

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Revision as of 13:32, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA023443| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA023443, complete gene.| tag = OsI_240...")
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Gene Name

BGIOSGA023443

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA023443, complete gene.

LocusTag

OsI_24062

Ensembl Transcript ID

BGIOSGA023443-TA

Ensembl Protein ID

BGIOSGA023443-PA

Length

7835

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:29500970..29508804

Sequence Coding Region

29500970..29501067,29503196..29503300,29503434..29503551,29503674..29503724,29503828..29503919
,29504051..29504150,29504456..29504575,29504668..29504745,29504990..29505036
,29505119..29505174,29506451..29506491,29506846..29506951,29508418..29508550
,29508654..29508804

Genome Context

<gbrowseImage1> name=IndicaChromosome06:29500970..29508804 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:29500970..29508804 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCGGTTCTCATAGTGACCAGCGTGGGGGACATCGAGGTGGACCTCCACACCGACATGTGCCCCCTCACCACCAAGAACTTCCTCAAGCTCTGCAAGATGAAGTATTATAACGGGTGCCTGTTCCACAAGATAGAGAAGGATTTCTTGGCACAAACTGGGGACTCAACTGGAACAGGAGCTGGAGGCGACTCTGTATACAAATTCCTTTATGGTGACCAAGCACGATTTTTTGATGATGAGATCCATCCGGAGCTTAGGCATTCTAAAATGGGAACTATTGCTATGGCAAGTGCTGGTGAAAATTGCAACGCCTCGCAGTTCTACATCACCTTGCGGGATGGCGTGGACTACCTCGATGATAAACACACTGTGTTTGGCATGGTTGCTGAAGGCTTTGACACGATTACAAAGATTAATGAAACATATGTTGATGATAAAGGGAGACCATTTAAGGATATCAGGATTAGACATACATATGTCTTGGATGACCCTTTTGATGATCCTCCTCAGCTCAGTAAACTTATTCCTGAGAATTCTCCTGTAGGGAAACCACAGGATGAGATTGCAGAAGAGCGCTTAGAGGATAACTGGGTCCCTCCAGATGAAACAGTGGCTCCTGAAGAACTCGAGGATACTATCCGCTCCAAAGAAGCACATACAAATGCTGTTATTCTTCAGAGCTTAGGAGATATTCCAGACGCTGAGATCAAACCACAAGACAATGTTTTATTTGTTCGTGAACTCAACAAAGTAACACAAGATGAAGATTTATATACAATTTTTTCTCATTTTGGCTCTGTGACGTCAGCTGAAATAATTCGTGACTATAAGACTGGTGATAGCTTATGCTTTGCTTTTATTGAATTTGAGAAAAAGGAGGCATGTGAGCGCGCATTCTTCATGATGGACAATTGTTTGATTGATGATCGAAGAATACGTGTTGACTTCAGCCAAAGTGTTTCAAAACAGTGGCGTCAGTTCAGACAAAGCAAAAGTAATGCAAATAAAGATGGGTGCTTCAAGTGTGGCGCACTTGATCTCATAGCCAGAGACTGTGACCAGAGGGCTGAGCAGAAAAACAAAGGGCCAAATTATATCCTGAAAGACGAAAACACTCAGCGCAGTGGGAACAAGCGTCGAAGCAAGCACGAGAGCAGAAGCAAATATAGGGATGGCGATGACGATTACAGACGACAATCAGGAGGCAGTCGATATGGCAGGGATAAGTGCGATGGTGAACGACGCTACAGAGGAGATGATGACCATGGAAGGAGCAACCGCCACACGAGATGA</cdnaseq>

Protein Sequence

<aaseq>MSVLIVTSVGDIEVDLHTDMCPLTTKNFLKLCKMKYYNGCLFHKIEKDFLAQTGDSTGTGAGGDSVYKFLYGDQARFFDDEIHPELRHSKMGTIAMASAGENCNASQFYITLRDGVDYLDDKHTVFGMVAEGFDTITKINETYVDDKGRPFKDIRIRHTYVLDDPFDDPPQLSKLIPENSPVGKPQDEIAEERLEDNWVPPDETVAPEELEDTIRSKEAHTNAVILQSLGDIPDAEIKPQDNVLFVRELNKVTQDEDLYTIFSHFGSVTSAEIIRDYKTGDSLCFAFIEFEKKEACERAFFMMDNCLIDDRRIRVDFSQSVSKQWRQFRQSKSNANKDGCFKCGALDLIARDCDQRAEQKNKGPNYILKDENTQRSGNKRRSKHESRSKYRDGDDDYRRQSGGSRYGRDKCDGERRYRGDDDHGRSNRHTR</aaseq>

Gene Sequence

<dnaseqindica>1..98#2227..2331#2465..2582#2705..2755#2859..2950#3082..3181#3487..3606#3699..3776#4021..4067#4150..4205#5482..5522#5877..5982#7449..7581#7685..7835#ATGTCGGTTCTCATAGTGACCAGCGTGGGGGACATCGAGGTGGACCTCCACACCGACATGTGCCCCCTCACCACCAAGAACTTCCTCAAGCTCTGCAAGTAAGCTTTTAGTTTACCCGCACCTAGGGCTTGTTCTATGTGTGAATTTTCGCGGGATCATCTGGCTACTAGAGGTAACGAGGGTCTCGTGGCGGGTGGGTTAGCCTTCAGGAAGCAGTTGAGCGGGCAATTTTGGCGTTGTAGAGCGGGTGCTACTGGGTCTGGATTCGATGTGAAGGGTGCGTGTAGTGTAGTGTGTTGGATTGATTGATTACAGTTGAAGCTGCTGCCATACCAGTGTGTCGTGAATCATTGTGAATGCTCTTGTTCCCATGTTACTTCGAGTTTCGATTGCGTTTAACTTGTTAGTGTAGTGCTGTTAAGTTGATAGCATCTTACAAGTGCTGTTGGTAGCACTTGTCTGTGGCGCTCCTCATATGACAATCTGTATTAACCATCTCTGTACATGTCTCTTGGATATTTTCAACGTTATTCACCCAGTGTTTGCATGATTTTTCTTTTTGTTGCAACATGGCGACATGCTTCATCAGATTTTGCTGTAGGACTTTTTTTTTCTTGCAACGGTTTTGATGCTTCTGCCTGTCATGTATTTGTTGCGGCCGTAGCCCATAGTAGGAAATTGTGGCATTTGTAGTGGAAAATTGTTTCAGCGGAGTGGACAAATAAACTGGAGCAGACAATTGTTTCAGCTAGAACATGCCATTGTTGCGATTGTAGCGAGAAATCGTTTCAGCTGCAACAAGGAAATTGCTTCAATTCTTCTTTTGGAATTGTTGCTACGTGAGTAGAATATCATTGCTAGCTAAGCCACCAATATTTATATCTAATCGTTGATTTGATTTGTGAGGGATGTTGATATTGTGGTAGACATTTTATTTTCTTTATGATTAGTGATAAATGAAAGCAGCTGTGGTACAATTTAGAAGAGCCAGAAGTTGACTTCCGAAGCAAAAGATTACGGCCTCCGTGGAGTCCATGAATTGGTTGATTTAATGGTTGCTTATATAGTAGCGAGGATCACTTATTTCAGAAACGTCTGACAATAGCTCTCGGATTGAACATCCGAGCACTAGTTGTTATCATTAGTATTTGGTTCTAGGGATGAGGTGGGATGAAACAGGATGGTTCTACATTTTTGGGATGAGGTGGAATAGAATTGTTTCGTTTAGTTGTTTGGTTGAGAATGGGATGATTCAATATTTTGTTTGGTTTAAGCGAGATGGGATGGAATGGTCCAATCCAGAGTTTGGTTTGGAGAATAGAATTAGATTTTCTTTTTAGAAAATGGGATAAACCCGGCCTCTACATCCAATTGGATTTACGCAGCCAAGAATAAGATAGGATTGACTCAGGTAACCTGCACCTTAGACTGGTGAGAATAAACCTTTTTTTTTAAATTTCCCTTATTTCCTTTTCCCCTTCTTAATTTTTCTCTCTCCCTTATCATCTGTAGGAATGAGCTTTCCTGGCTACAGCTTCTTCCTTGTCTTCCTCTCTCTTCATTATTTTGTTCACATCCAAAACTATTTGTTCTCCAGATTCCTGAGTGGTGCTATGGCTAGTGAGTGGAGGAAGCGGAGTGGATGACGCCACTTTGCTGCACAAGCCGGCGACTCTCATGAGCGCGTCAAGGCAGTGATCCACTAGCGGCATCAATGGTCGAGTGCAAGAAACCTTTTAACCTCATGGAGGTGGTAGCCCACTGCTTCTCAGCTTGAGGAGAGTGGTGGCTGCTCGCAGTCTCGCAGATGGGCGGTGAACAAATCCAGCGAGAAGCTCTCCCCCGCACTGCTGAACATTCTTGCATGAGTTCATCTGGGCAAAAGAGTGGTATCATCTCATCCTGAATCTTGTTGGAATATTCGTCAAAATGAAACTACCTCGTCCTGAAATGTTTCGTCCCATCCCAAGAACAGAACACATGGGCTCATCCCAGGACCATAACCATTCGTTCTATCCCACTTGATCTCAGGAACCAAACACATAGAGGATTGTTCTTTGATTCTTAGTGTCGTTGTCTGAACTAAAATTATGTAAATATGTTTGTCTACTTATCTTGCAAAAGTTAAATACTGCAAAATAGCAGGCTATGAAATATGACTGAGTTGACTACTTATGGCAATTGGAGTAATCATTCTCTCGCTGTTCCTATGATTTTACTTACCAGGATGAAGTATTATAACGGGTGCCTGTTCCACAAGATAGAGAAGGATTTCTTGGCACAAACTGGGGACTCAACTGGAACAGGAGCTGGAGGCGACTCTGTATACAAGTAATCAATTAATATAGCGCAATAGGAGCCTCTCCTTCTGTTTCCTGTAAAAAAATAATCAATTGCTCAGATGTCTCACTGCCACCGATTGTCAAATACATGCCTGAAAACGGATTCATTTTTTTTCCTGTAGATTCCTTTATGGTGACCAAGCACGATTTTTTGATGATGAGATCCATCCGGAGCTTAGGCATTCTAAAATGGGAACTATTGCTATGGCAAGTGCTGGTGAAAATTGCAACGCCTCGCAGGTGTGATACTTAGTCCCTAAACTTCCTACCGAACCCAAATGTTTTGATTACCAGTAATTAGTCCATTTTGATGTCCTCACTGCTGTTTTTAGCCTTTCGTTTATGTTTGTGTGACTTATTAGTTCTACATCACCTTGCGGGATGGCGTGGACTACCTCGATGATAAACACACTGTGAGTAGCACCTTACTATTATTACATTGACTTAGAGATTTTTTTTCTTGAAAAACCCTACTTTATCTGCAGTGACTCAAAAGTATATCTTCATCAATTGTAGGTGTTTGGCATGGTTGCTGAAGGCTTTGACACGATTACAAAGATTAATGAAACATATGTTGATGATAAAGGGAGACCATTTAAGGATATCAGGTAAAATACCTTTGAAAAGTACTAAACTGCATAGTTAGAACATGCTTGCCAATATTTACTTACTTTCTGGTCTTTCTGTTGTTTCTGCTTTATTTCCATTGCTGACCTTCTGCAAAATACTTAATGAACAGGATTAGACATACATATGTCTTGGATGACCCTTTTGATGATCCTCCTCAGCTCAGTAAACTTATTCCTGAGAATTCTCCTGTAGGGAAACCACAGGATGAGGTAATATGAGTTCTGCTATTGTGCTCATGTTGGAAAGACAATAATCAAAATTGACTAATCAGAATCACAGGCTGTCTTACATTTGTTTAATTCGTTTTACCTTCCACATTGTTGAAAACTTTATAACAATTTATTTGGGCACATACCTGTTTAAGAGTATGTATGGATTTTAGTTGAGGCAGCCACTGGGTGTACATGTAATTTATTTTCCCTGTTCTGTCTGTACCAAATTATGCTAAAAGTTCCTATGCAATGTCCTGCTAATGTACTATGTTATATATTTTCTTTTCACCGTCAATGTACAGATTGCAGAAGAGCGCTTAGAGGATAACTGGGTCCCTCCAGATGAAACAGTGGCTCCTGAAGAACTCGAGGATACTATCCGCTCCAAAGAAGCACATACAAATGCTGTTATTCTTCAGAGCGTAAGTCCTGGTGCCAAATTAAAATCCAAAACTACGCTTATTAATTATTAATCATGTTATAACTTGTGACTCATAAAACTTGTCTTATTCAGTTAGGAGATATTCCAGACGCTGAGATCAAACCACAAGACAATGTTTTATTTGTTCGTGAACTCAACAAAGTAACACAAGTTAGTATCGGCTCTTAATTGATTAACTCTGTTCGCCAGTTCCACTAATTTTTTTGCTTATCCATCCTGCTTTGGTAGTAGCACTACGTACAGATTCTTATGTATAGACATTTCATTCATTTAATGCTCCTGTGATTATATCACAGATTATTTTGGACATCATAAATATCGGATTGATATCCCATAGCTTATGAAATATTTTTTGGTAAGAGAAGCTAAAGGGCTAATATTCATTGTTTTGTAGGATGAAGATTTATATACAATTTTTTCTCATTTTGGCTCTGTGACGTCGTAAGTGCCTTTTCCTAAGCTCAAATAATTTGCTTATCTTCCTGTTGCTTCTCTTGTTAATTTTTTTAATTGTTCCTTGCAGAGCTGAAATAATTCGTGACTATAAGACTGGTGATAGCTTATGCTTTGCTTTTATTGGTAAGTTTCATTCCTCAAAAGCTGGGGTGCATTGACATACTTCGATCAAGCATTGGATTTAGACAGAGTCCTGCTATTTTTCTGGAGTACCCTGAGCCCAGTTTGTTCATCGAATACTTGCCTGAGCTATATCACTAGATTTCGTAGGCATTCATCATCCAGTTATTCAGTTGTGTTGTACATCAGCCTCTTAGATCTGTTATCCTAACAGGGCTCCAACTGAATTACCTATGCAATAACTGTTGGTGTTTATTGAAAGGCATATACTTTAGTTGCAGCATGTAAACACACCTTTTATTTTGTTACTATATACCCGTGCATTGCAAATGGTCCCATACTACTGAAAATGGGCTAGGGGCTAATATATGGATCTAACATAAAGTGAGAATATATTTTTATCCAACAACTATTCCCTTTTTTTCCCGTCTTTCTTAGCGATTTCTTTTTGTGTGTAACAATTTTTCTCTAGTGATTTTTTTTATGGTTCCAAAAAAAGAAGGTTTCTGCTACTGTTGCTAGATTTTCTAAAATAGTTTTTTTTTGTGCGGAACCTTTTTCTCCAGCAATTTTTTTTCCATGAGCGAGGGGGAGGGGGTGGGAAGGAGGACAACTGTGCTTTTATAGTAGTAGAGATAGCTAGTAATATACCCATGCATTGGAACGGGTCCGTACTACTGAAAATGGGCTAGGGACTATTAATATGGATTTAACATAAAGTGAGAATTTTTTTTATCTAACAACTTTTCCTTTATTTTTTCTTTATTTCTTAGCGATTTATTTTCTTTTTGTGCAGAACAATTTTGCTCTAGCGATTTTTTTTCTGGTTCAAAAAATTAAACGATTTCTACTACTGTTGCTAGATTTCCTAATTTTTTTTGTGTGGAACCTTTTTTTCTAGCGATTTTTTTCCATGAGCAAGGGGGAGGGGGTGGGAAGGAGGATGAGTGTGCTTTTATAGTAGTAGAGATAAACTCGCAAATGGATAAAATACATGAATTGTCAAAGAAGATTAATGGTGTTTTCTCCTAAAAAACAAACCTAATGATTTAAGAAAACAAACTGAGTGACTCCATTGTACACTTCTGAGGTATTAAACCATAGAAGTTAACTGATAGCTCAACTGTTCTCAGGGTTACAATGTCAGTGCAACATATTTGGTGCAGACTCAAGTAGCCAGTAGATGGCCTAAGAAAGAATCTCTCTTGTTCCACCTGGATTAATTGGCAAGATCAGAATGTTGTTACAAAATACTAAAAATTATCTTGGTCTTTTGTAGAATTTGAGAAAAAGGAGGCATGTGAGCGCGCATTCTTCATGGTTAGTTGCCTAAATTCCTGTTTCCAGTGGCAGATAAAATTTCTTCTCTTATATAATTATACTCTATAATTCCTTCTGCCACCTACTCCCTCCGTTTTATATTATAAGACTTTCTAGCATTACCCACATTCATATATAGATTCATTAACATCTATATGAATATGGGTAATGCTAGAAAGTCTTATAATATGAAACGGAGGAAGTAGCATTCTAGCATATTTTTTATATATTTATTTATGCTTGACTAGTGAATGTTACCTAGTTTCTGCATTGACAATTCAGCAGTCTATGTTTTTGTAACTATATTAGAGTGTTTTCATGGGAGCATTTGCTTACTCAATGATATGCTTATAGATGGACAATTGTTTGATTGATGATCGAAGAATACGTGTTGACTTCAGCCAAAGTGTTTCAAAACAGTGGCGTCAGTTCAGACAAAGCAAAAGTAATGCAAATAAAGGTAAGATAAGTCATGTATTCTTATTTCCATGGCTTATCGTTGCAATTCCAGCTTCTTTTTTATTTAAGCTAACTGCAAAATCAGTAGGGGAGGTGCTCTACTGTTGGTTTTTTCCTTTAAGGAAAAGAACTAAACAAATCTATTCCTCATCAATATTCTTTTCATCTAGACTTACTTTGGTGGCACTCAAATATGCATATTCTCATTTCAAACCATAGTTGTAGCATTCTGTGTTCATTAGAAATTCTTGAATCCTATAAGGAATTTTACCATTTTGTACCATGGTGAAGATGTCGAGTCAGTAGCTAGTACCTTTAAATATTTTCAAGTGAAAAGATGGCAACAATGTTCCCAATAAGTTGGGGGCAAAGAAGAAAGAACACGTCGATCTGAGTAAGACTTCAACATGTATTTTGTCCTTAGCATTTCTTACTAAATCTCTTGCTTGAACATGCATTTGTTCTTTGGAGTTCATCTGTAAATAGGAGAAGTGTGATATGAATACCTCGTCTTAGTATATCAGTGAGTGTGAAGATCCCCACACAGAATCTAATTGTTACATGAGTCTTTATTTTTTCAGTTTTTGGCAAAACTCTGAAGCACTTGCTGCATACAGTTCGTATTTTCATCATTTGCTAGGCATTCTGATACTCGGATTGTTGGTTTCTTTGTATATGTAATATATGCGATCCATGTAGATAGCCCTGCACTGAACTTAACCATAAATTCTTCCAGAATCAACGGGACCGTGTTTTGTTCTTTACAACACGAGCTGGGCAACGGACTTGAATGATAATTAGATGCTTTAAGAACATTCCTCTACTAGAGTAACTTGTATAACTGGTGACTGGTGAGAGTTCTCGTAACATCTCTGCCAGACAATATTAAGCCATGAAATTTCTATTTCTCTGTAGAAAAAGTTGTTTTCAGGAATACGCGAGACGCACATTTTTATATTAAGAAGGAATAAATGAAATTACAGGGGGGCCAAACAATTTAAAAAAGAAGGGGACAGGGTACAGGTGTGGGGGGGAAACAGAAATCCTAATCTCCTAAGGAGTTTGGCGACCCGTGAACAAATGAAGGAACTACCATGGCCGGTATGGCTGCCCTAGCCATCCGCCAAACTGTAGAAAAAGTTGTGATTTATGAAATGATTTTTGACAAGCAACATCTCAGTCTAGGTTAACCACATCGAACCCATTGATCTCTAGGTACTAGGAATTACCTCAGTATGTTCATTGCCGAGTTTAACATTCTCAACTAGGACCCTGAATTCTGGTATTAAGTCGAGTTAGTTGTGAGACCTTATGCTTATTTTATCATGTGGGAGTTTTTAATTCCTGCATAGTTGATTGCTTCTAATGTATTTTTTTGAATTGCTGTGCAACAAAATGTCCTTTTAATCTCTTCCACAAACATACTTTAAAGTGAAAAATACATGATGCATTTCTTTCTCTTTGCAGATGGGTGCTTCAAGTGTGGCGCACTTGATCTCATAGCCAGAGACTGTGACCAGAGGGCTGAGCAGAAAAACAAAGGGCCAAATTATATCCTGAAAGACGAAAACACTCAGCGCAGTGGGAACAAGCGTCGAAGGTGATTTTCCCATCCGCCATCACTCATATTTTCTGATTGTTTCGCCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTACAGCAAGCACGAGAGCAGAAGCAAATATAGGGATGGCGATGACGATTACAGACGACAATCAGGAGGCAGTCGATATGGCAGGGATAAGTGCGATGGTGAACGACGCTACAGAGGAGATGATGACCATGGAAGGAGCAACCGCCACACGAGATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA023443

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA023443&oldid=45968"