BGIOSGA023447

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Revision as of 13:32, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA023447| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA023447, complete gene.| tag = OsI_240...")
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Gene Name

BGIOSGA023447

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA023447, complete gene.

LocusTag

OsI_24069

Ensembl Transcript ID

BGIOSGA023447-TA

Ensembl Protein ID

BGIOSGA023447-PA

Length

6801

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:29538136..29544936

Sequence Coding Region

29538136..29538198,29539029..29539260,29539367..29539615,29539923..29539973,29540132..29540392
,29540475..29540527,29540657..29540771,29543122..29543376,29543879..29544936

Genome Context

<gbrowseImage1> name=IndicaChromosome06:29538136..29544936 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:29538136..29544936 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGATGTGGAGGGTGGTGGTGGTGGTGGTGGTGGCGCGCCGCCCAGGGGGAGGAATTCTTGGGGATGGCAGAAAGGAACACTTCTACTGGCATATCAGAGCTTCGGAGTTGTGTATGGCGATCTCTGCATCTCACCCGTGTACGTGTACAAGAACACCTTCTCCGGAAAATTGCGTCTTCATGAGGAGGATGAAGAGATCCTTGGGGTATTATCTCTGGTCTTCTGGAGCCTTACTCTTATACCTCTCCTCAAGTACATCATCCTTGTTCTAGGAGCAGATGACAATGGAGAAGGTGGCACATTTGCTCTGTACTCATTGCTGTGCAGGAATTCCAAGATGGGACTTCTGAACAACATGCGTGCAAACCATGGTTCTCTGTCGGCATACAACAAGGAGGAACCTTGTAAGGAGTCGAGGAACAGCATGCTCATCAAGGCCTTCTTCGAGAAGCATTACTCGCTTCGTGTTGTGCTGCTGCTGTTCGTTCTGATGGGTACTAGCATGGTAATTGGGGATGGTGTCTTGACCCCAACAATGTCAGTGTTGGCGGCAGTTTCTGGGCTCAGAATTAAGTTTCCAGAACTACATGAAAATTACACTGTGCTCCTTGCTTGTGTCATTTTAATTGGGCTTTTTGCATTGCAACACTATGGAACACGCCGTGTCGGATTCCTATTCGCACCAATCTTGATTTCCTGGCTCACTTGCATTGGTGGGATTGGCATATATAACATCATAAAGTGGAACCCTAGTGTCATCCGTGCTCTGTCCCCGTATTACATATACAACTTCTTCAGGAAGGCTGGCAAGGATGGCTGGAGCTCACTAGGAGGGATTGTTCTTTGCCTTACAGGTGCTGAAGCCATGTTTGCTGATCTGGGGCATTTCTCAAAGCTTTCACTGAGGCTTGGATTCACAATTGTTGTATATCCTTGCTTAGTTCTGGCTTACATGGGTGAGGCTGCATACCTGTCCAAACATAGGGAGGATCTCCAAAGTAGCTTTTACAAAGCTCTTCCAGACCGTGTGTTTTGGCCAGTGTTGTTCATTGCAACGTTAGCCACAGCTGTTGGGAGCCAAGCGATCATCTCAGCTACATTTTCCATCATAAGCCAGTGTAGGGCTCTTGGTTGTTTCCCGCGAATAAAGGTGGTGCACACATCAAGCCATGTCCATGGTCAGATCTACATCCCAGAGGTGAACTGGGTGCTCATGTCCCTCTGCTTGGCCGTCACGATTGGATTCCGAGACACCGAGATGATTGGCAACGCCTATGGACTTGCAGTGATCTTGGTGATGTGCGCAACGACATGCCTGATGTTCCTGGTGATCACCACCGTGTGGAACCGGTGGGTGGTGTGGGCGGCGGCCTTCACCGTCGTCTTCGGCTCCGTCGAGCTCCTCTACCTATCGGCGTGCCTCGCCAAGGTCCCCCATGGCGGCTGGCTCCCGCTCCTCCTCTCCCTCACCACGCTGCTGGTGATGTCCACGTGGCACTACGGCACCGCCATGAAGCAGCAGCACGAGGTCCAGAACAAGGTCTGCCTGGACCACTTCCTCGGCCTCAGCTCCGGCATCGGCCTCGTCCGCGTCCCCGGCGTCGGCTTCGTCTACTCCAGCACCACCAATGGCGTCCCCCCCATGTTCGCCCACTTCGTCACCAACTTCCCGGCCTTCCACCGGGTCCTCATCTTCGTCTCGCTGCAGACGCTCGCCGTGCCCAAGGTCTCGCCGGAGGAGAGGTTCTTGGTCGGCAGGATCGGCTCGCCGGCGAACCGCCTGTTCCGGTGCATCGTCCGGTATGGGTACAAGGAGGGCAGGTGGGACCACTTCAACTTCGAGAACCAACTGCTGATGAAGGTCGTCGAGTTCCTCCGCCACCAGGACGGCAGCGGCGGAGGCGGCGGCGATCGGATGTCCGCCGCCGCCTCCGGCGAGGACGAGGCCATGTCGGTCATCCCCGCCACGTCGTCCTCCGGCGGAAGCAATCAGCACGCCTTTGACGCCGGGACGACGACGAGCTCGTGCGAGATCGACGCCACCGCAGGCGGCGGCGGCAGGAGGAAGGTACGGTTCGACAACGACGGCGGCGGCGGCGGCGAGGAGGAGGAGGAGGCGGCGGAGGTGAAGGAGCTGATGGAGGAGAAGGAGGCCGGCGTGTCGTACATGATCGGGCACACGTGCGTGTTCGCGCACGAGTCATCGTCGGCGGTGAAGAAGTTCGCCGTCAACGTGGTGTACGGCTTCCTCCGGCGAAACTCGCGGCGGCCGGCGGTGGTGCTCGGCATCCCGCATACCTCCCTCATCGAGGTCGGCATGGCGTACAGGGTATAG</cdnaseq>

Protein Sequence

<aaseq>MDVEGGGGGGGGAPPRGRNSWGWQKGTLLLAYQSFGVVYGDLCISPVYVYKNTFSGKLRLHEEDEEILGVLSLVFWSLTLIPLLKYIILVLGADDNGEGGTFALYSLLCRNSKMGLLNNMRANHGSLSAYNKEEPCKESRNSMLIKAFFEKHYSLRVVLLLFVLMGTSMVIGDGVLTPTMSVLAAVSGLRIKFPELHENYTVLLACVILIGLFALQHYGTRRVGFLFAPILISWLTCIGGIGIYNIIKWNPSVIRALSPYYIYNFFRKAGKDGWSSLGGIVLCLTGAEAMFADLGHFSKLSLRLGFTIVVYPCLVLAYMGEAAYLSKHREDLQSSFYKALPDRVFWPVLFIATLATAVGSQAIISATFSIISQCRALGCFPRIKVVHTSSHVHGQIYIPEVNWVLMSLCLAVTIGFRDTEMIGNAYGLAVILVMCATTCLMFLVITTVWNRWVVWAAAFTVVFGSVELLYLSACLAKVPHGGWLPLLLSLTTLLVMSTWHYGTAMKQQHEVQNKVCLDHFLGLSSGIGLVRVPGVGFVYSSTTNGVPPMFAHFVTNFPAFHRVLIFVSLQTLAVPKVSPEERFLVGRIGSPANRLFRCIVRYGYKEGRWDHFNFENQLLMKVVEFLRHQDGSGGGGGDRMSAAASGEDEAMSVIPATSSSGGSNQHAFDAGTTTSSCEIDATAGGGGRRKVRFDNDGGGGGEEEEEAAEVKELMEEKEAGVSYMIGHTCVFAHESSSAVKKFAVNVVYGFLRRNSRRPAVVLGIPHTSLIEVGMAYRV</aaseq>

Gene Sequence

<dnaseqindica>1..63#894..1125#1232..1480#1788..1838#1997..2257#2340..2392#2522..2636#4987..5241#5744..6801#ATGGATGTGGAGGGTGGTGGTGGTGGTGGTGGTGGCGCGCCGCCCAGGGGGAGGAATTCTTGGGTAATCAATTAAGCTTTGGTTCTTGGTTTGGTTCTTTGGTCTTTCAGTTTTGTGTTTGATTTGGTTGGTTTGGTGCATTTTGTTTGCAAGTAATTTTGCAGTGTTACTGCGGATTCTGGGATGAGTTACTTTGGGTGCGGGCGCTATCTCAAGTTCCTCAGGGTTAAATTTTGTAGATTTTCTGCATTTTGTTCTGAAAAAAACTGAACTTTTTCGAAGTCTATGGCGCTACAATTTCGCTTGAATCTACTTCTGTCTGACTAGGTGTTTCTGTGTATGCATGAGACAGAGAATGCTCTGAAGCTAAGGTTGTAGCGGCGCACTTCTTTTCAGTTCTGAATTTAGGTGGTAAAGTTGGTTGTTTTCAGTTAATTAATTTTGCATCAGTCCAGCTCATTAGTTGCAGTCTTGCAGAGTGATATGTTATGCTTTCTGAATCTGATAAGGGGAATCCATGAGTTCAGGAATCAATAGATTCCATAGACGAGATGGTATCACGAAATCTTTGTAATGCACTGTAATTTTCCTCTTTGGTAAACGGGTCCATTTTCTTACATATACACGATTTTTAAACGTAGCCATCAGGTCACTTTTGATGGTCAGATTGGACATTTCCTTTCAACTTAGTACTAGTTACTACTACTTCAGAGTTTGAGATTTTTTCTGTTTACTTTGAATACTATCTTGTTGCCTATTTCAAGTTACTCTTTCTAGATCATCAATTTTGGCCAGCAGTAAAATTCAAAGTAGTCAAGTCGATACTACTGATTAGTAATTACGTCATCAAATGGTCACGGACACGAAAGCATGACACGGTCTGTGTTTGCTAGGGATGGCAGAAAGGAACACTTCTACTGGCATATCAGAGCTTCGGAGTTGTGTATGGCGATCTCTGCATCTCACCCGTGTACGTGTACAAGAACACCTTCTCCGGAAAATTGCGTCTTCATGAGGAGGATGAAGAGATCCTTGGGGTATTATCTCTGGTCTTCTGGAGCCTTACTCTTATACCTCTCCTCAAGTACATCATCCTTGTTCTAGGAGCAGATGACAATGGAGAAGGTGATTTCAAAAATCCGCGTGTTTTTCGCCGTATTAATAATTTCAATGTGCATTTAGTTAAATATATGCCATTTTTGTCTTGCAAATGTGCCATGTATGTTTGCAGGTGGCACATTTGCTCTGTACTCATTGCTGTGCAGGAATTCCAAGATGGGACTTCTGAACAACATGCGTGCAAACCATGGTTCTCTGTCGGCATACAACAAGGAGGAACCTTGTAAGGAGTCGAGGAACAGCATGCTCATCAAGGCCTTCTTCGAGAAGCATTACTCGCTTCGTGTTGTGCTGCTGCTGTTCGTTCTGATGGGTACTAGCATGGTAATTGGGGATGGTGTCTTGACCCCAACAATGTCAGGTACTGAACTCTGAAAGACTGAAACTGAAGATTTGTGGAAGTTGTATGCTCAAGGCACAAATTTTGCTGCTTGATCATTTTTTTAGAAATTTTAGATAATGGAAGTGTTTTATAAACCAAAAATATATATGAGCATATTTTGTATACAATTGACAAACGTATATGATAGAGTAAGGAACTTTGTTTTTTAATTTCTTTTTTTAAAAAAAAAAACAGAGAGTAAGGAATTCTTGGGGAACATTTAAATTGCTTTAACATCATCATGTTTTGTTTGTGACTGAAGAGGGTGGCATGTTCTTTTCTGCAGTGTTGGCGGCAGTTTCTGGGCTCAGAATTAAGTTTCCAGAACTACATGAAAGTAAGCAGCTGATATATTGGCTTGTCTCATAAAGGTTTACTGGTCACTCCTCTTAGCAGCACACATTTAAATTACTCTTATTCTCAATTCTTTTTCTTCTTAATGTCTACTTGCACCAGAAAATACAGCTGATCTGCTCCTGTTACACTTCTCTGCAGATTACACTGTGCTCCTTGCTTGTGTCATTTTAATTGGGCTTTTTGCATTGCAACACTATGGAACACGCCGTGTCGGATTCCTATTCGCACCAATCTTGATTTCCTGGCTCACTTGCATTGGTGGGATTGGCATATATAACATCATAAAGTGGAACCCTAGTGTCATCCGTGCTCTGTCCCCGTATTACATATACAACTTCTTCAGGAAGGCTGGCAAGGATGGCTGGAGCTCACTAGGAGGGATTGTTCTTTGCCTTACAGGTTCACATATTTTTATCCTTTTAGTTTTGGTTTATCACTTGTTTTCGTTGTAACATGCTTAATTATAGCCGTAGATTTTCAGGTGCTGAAGCCATGTTTGCTGATCTGGGGCATTTCTCAAAGCTTTCACTGAGGGTAATATGATTTTCAGTGGTGAATTGGTGATAGTTTCAGTCTTGGTAGCTGAAAGAGTACACTTTTTTTTTTTTGCTAAGAATTAGGGAAAGAAATCTTTACACTTATTTTTTTGTTTTGCCATGACAGCTTGGATTCACAATTGTTGTATATCCTTGCTTAGTTCTGGCTTACATGGGTGAGGCTGCATACCTGTCCAAACATAGGGAGGATCTCCAAAGTAGCTTTTACAAAGCTCTTCCAGGTGAGATGTTAATTCTCTTGCCAGATTGCTTCAGGTTTTCCGCTGCTTTTTTTTTCTCATCATCTTTTCCAACAGAGAGTACATTGATTCTTGTAATATTATATTTATCAATCCCTTCAGAGTTTAGTATATATAATATCAGTAGAATTTGTGCATGGCCCATGTAAAGCTTAACACAAGATCAGGGAAAATCTGGCCCGGCCCAGTTATGCCCCAAAGGTGTTATGGGCCATGTTCGGGCAGTATTAAGCACAAATTCAGCCCTAAACAAATTCTTCTAATTTCACGGTACAAATTCAGTGTGTGGTCAGGACTGAAACAGAAGGCCTGAGAAACTTGGGCCAGGAATTTTGGCCTGATTCCAATTTCCGTCCATCGTTTCGTCTGTTAATGAAGTGCACATCATTCTTGTATAACTCACTTTCCCTTGTGGATCTGTGGTTTTCTATTACTTATATTACCAAAAAGAAATAGTGTATAAAGGAAGTAGAAGGATGTGAATTTGTTTGTGAAAGGTTAATGGGCCTTTCAAGGTCTTAGTGTATGGAATAACTCAGGAAACTACAAATCGGATGTCCGATTCTCTTAAAAAAAATTGGGTGGTTAAATATTTCAGTTGACCACCAGTGAAACATTAAGTTATGCGTGATGAAAAAAACAGCCATTGATTTTTTTTTTGTGTGTGAAACATAGTGAAAACACACGTTTAAACATGTCGTTATCGTGTATGAAACATTGAGTTTTAACAGTTCGAAACATATGTTTTCTTTCATCAGAATATAATCTTTGTGATATCTTACTGTGTGATCGGATCATAAGTCAGACAAGTAATTTAGGAGAAAAAAATATGTTGAAGATCACAAAATACATACATGTATGGATGAAGTGAAGAGAACAACTAGTAGACTCCAACATTAAGAATTTATTTTCTTGGCAAATTTATTTAAGTTTGAAAGCTAACATAAATTCAAAGAGAATTGGTTTAAAGCTAAGCATCATTTTTGTCGAGTATAAACATGCAATATTTATATCACCTTTCATTAAGAAAAATATTCAAAACCATGACTCGCTATGAGCAGTAGATTTTAATATTTAGATTGAATAATTAGCATGAAAACTGGTATGTGTGCTAAAAGGCAACAACTTTCGTGCTAGTGCACTTAATCCGTTGCTTTTCAGAAGAACCCGCAAATGTAACTGAAATATAAGACCTAAATACTAAACCAACTGAACCACAAATATGCACTATATTGGATGATAGCCCTAGCCGCCGACTCCGACAGTTGAGAAGTGACAAACCTTTCGATTGATAATCAGATTATCTGATGAAGGTGTGAGCATAACAACTCACTCATGAAGATTACTACTTGGAGAGATAGGCAAGCCTTCAGCTAATTGAATACTCAACAGTCAAAATGCTATTCGAGTAAAAGGAATTTGTTGAAGACACCCTAAGGCCTTAATGGTCCCTCATCTGCCTCGAGCACATAAGGTAGGGACCAGAAAGTTATACACGTAGTCCACAGGTTATTTGTAAACCTAATACTATTTAACGTAGGAAAATATCTATATTACCCTCAAGTCATAGGCCATTGTTGAGGGGATGTTGTATGTAATTTCTTTTGTACCCTATCTAGATTAATTAGAAAACCACCTTAGTGACAATGTAAAGGGGGACTATCTTTAGAGGAAAAAAGTTGTAACAAGCTTGTGGTACCACACTTACTCCCCATCGAAGGTTAGGGGCCTTCAACTCTTGGGCCCCTTACTCTAGAACTCGGAAGTAGACAGGAGACACACATATTGTATATAGTAGTCCTATAATATTTTTCAAGAAAAACTAGCGGTACAACAGTTGTAGTGAACGTATATATGTTTAACTAGATGAATACCCCGTCTCGTTGCTACGGGAAATTAAATTGTATAATATGTACAAATAAGATGCAATATATTTTCTAAACCAAAACAAAATGACTTCCTATATATGTTTTATCTAATCTACACATGGTTGCAATATAATGCAAGGTGAACATATTTTATGTAATTGATACTTATAAATTTTGAGCCTAAAAAAAATTGATATTGTATGGTTTCATGGGTGAAGAAAAAATAAACTATTTGTACCATAGATCTATCATGCTAGGGCTAAAAATAATTGAGATGATGTGGCTTAATGAGAGAAGAGAGGAATAACATTAACAATACTTATTAACGGGGATGAACTATATAAGTACATAGGATTACATTTCCTTCTAATGCAGCAATTGAAGTTATTCGACACCTTCTAGTTATTTTCCAGCTAGTGTTTTACATATCTGTGTATGTTTCCTTTTGCTACATATATATGCAGACCGTGTGTTTTGGCCAGTGTTGTTCATTGCAACGTTAGCCACAGCTGTTGGGAGCCAAGCGATCATCTCAGCTACATTTTCCATCATAAGCCAGTGTAGGGCTCTTGGTTGTTTCCCGCGAATAAAGGTGGTGCACACATCAAGCCATGTCCATGGTCAGATCTACATCCCAGAGGTGAACTGGGTGCTCATGTCCCTCTGCTTGGCCGTCACGATTGGATTCCGAGACACCGAGATGATTGGCAACGCCTATGGTAACTAGCACATCATTTGCTTCTTCTTTTAAACCAGACTCTTACACTTGAGGTAGGATTTGGTTAAACTTTTAAAACTTTGATTAACAATACTTTCTTAGATGTTTAGTTTATAAAGACAAAAATGGTATACACAAATTTTCCTTGAGAAAAACACTATATACTAATATCGTAACCTTGTTATATTTTATAACTTATTCCAATATAAAATTTATAGTCAAATATTTAATTAAAAGTTGATCGAATCTTGTCCTTTAAGGCTACAAAGAGTAAATTTAGGTGACTGATAAATAGTAACAACCAGTATATCAACACCCATTAATTACTTGTGTTAAGATAAATTTTATGGTCCGTAAGATATATCAAGAGATAAATTTTGATACCTTCTGATACCGGATATATCAAGAGGTAATAAATTTTGCATTAGAAAATATAACCATACCTCCAGATACCTTTTCAATAACCGTAAAATCACTCAGTTATCTTGTGTTAAAATTTGCAGGACTTGCAGTGATCTTGGTGATGTGCGCAACGACATGCCTGATGTTCCTGGTGATCACCACCGTGTGGAACCGGTGGGTGGTGTGGGCGGCGGCCTTCACCGTCGTCTTCGGCTCCGTCGAGCTCCTCTACCTATCGGCGTGCCTCGCCAAGGTCCCCCATGGCGGCTGGCTCCCGCTCCTCCTCTCCCTCACCACGCTGCTGGTGATGTCCACGTGGCACTACGGCACCGCCATGAAGCAGCAGCACGAGGTCCAGAACAAGGTCTGCCTGGACCACTTCCTCGGCCTCAGCTCCGGCATCGGCCTCGTCCGCGTCCCCGGCGTCGGCTTCGTCTACTCCAGCACCACCAATGGCGTCCCCCCCATGTTCGCCCACTTCGTCACCAACTTCCCGGCCTTCCACCGGGTCCTCATCTTCGTCTCGCTGCAGACGCTCGCCGTGCCCAAGGTCTCGCCGGAGGAGAGGTTCTTGGTCGGCAGGATCGGCTCGCCGGCGAACCGCCTGTTCCGGTGCATCGTCCGGTATGGGTACAAGGAGGGCAGGTGGGACCACTTCAACTTCGAGAACCAACTGCTGATGAAGGTCGTCGAGTTCCTCCGCCACCAGGACGGCAGCGGCGGAGGCGGCGGCGATCGGATGTCCGCCGCCGCCTCCGGCGAGGACGAGGCCATGTCGGTCATCCCCGCCACGTCGTCCTCCGGCGGAAGCAATCAGCACGCCTTTGACGCCGGGACGACGACGAGCTCGTGCGAGATCGACGCCACCGCAGGCGGCGGCGGCAGGAGGAAGGTACGGTTCGACAACGACGGCGGCGGCGGCGGCGAGGAGGAGGAGGAGGCGGCGGAGGTGAAGGAGCTGATGGAGGAGAAGGAGGCCGGCGTGTCGTACATGATCGGGCACACGTGCGTGTTCGCGCACGAGTCATCGTCGGCGGTGAAGAAGTTCGCCGTCAACGTGGTGTACGGCTTCCTCCGGCGAAACTCGCGGCGGCCGGCGGTGGTGCTCGGCATCCCGCATACCTCCCTCATCGAGGTCGGCATGGCGTACAGGGTATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA023447