BGIOSGA023458

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Revision as of 13:33, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA023458| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA023458, complete gene.| tag = B1153E0...")
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Gene Name

BGIOSGA023458

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA023458, complete gene.

LocusTag

B1153E06.13-1

Ensembl Transcript ID

BGIOSGA023458-TA

Ensembl Protein ID

BGIOSGA023458-PA

Length

4810

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:29923132..29927941

Sequence Coding Region

29923132..29923367,29924455..29925107,29925185..29925415,29926325..29926965,29927042..29927941

Genome Context

<gbrowseImage1> name=IndicaChromosome06:29923132..29927941 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:29923132..29927941 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGACGAGAGCTCGGCCGCCATTGGTGCTGTTGCTGTGTCTCTGCTTGGCTTCTTGCTTGAGCTCGGCCATTGGTGGCGTTTCAGCTGCCGGCAATGGCTACCGGACCACGGCATTCCTGGTGGATGAGGGAGGGAGGCGGCTCAGAGCCGAGCTCGCCGCAGTCGCCGGCGCCGGCGGCGGGTCCACGGCGGCGTACGGCGACGACGTGCAGAGGCTAGACGTGTATGCCAGCCTGGAGACGGACAGCCGGCTGCACGTTCGCATCGCCGACGCCGACGGCCCGCGATGGGAGGTGCCCCAGGACGTCATCCCGCGCCCCTCGCCGGAGTTCTTCCTCCAGACGTCGCGTCCGGGCCGGCCCGTCCTCTCCACGGCGACCTCCGACCTCACCTTCGCCATCCACGCCTCCTCCCCGTTCCGCTTCGCCGTCTCCCGCCGCTCCACCGGCGACGTCCTCTTCGACACCTCCCCCAACCTCGTCTTCAAGGATCGCTACCTCGAGCTCACATCCTCGCTGCCGCCGCCCGGCCGCGCGTCGCTGTACGGCCTCGGCGAGCAGACCAAGCGCACGTTCCGGCTCCAGCGGAATGACACCTTCACGCTCTGGAACTCCGACATCGCCGCCGGCAACGTCGACCTCAACCTCTACGGCTCCCACCCCTTCTACATGGACGTCCGGTCAGGCGGCGGCGGCGCGGCGCACGGCGTGCTCCTCCTTAACAGCAACGGCATGGACGTCATCTATGGTGGATCGTACGTCACCTACAAGGTGATCGGCGGCGTGCTGGATTTCTACTTCTTCGCCGGCCCGTCCCCTCTCGCCGTCGTCGACCAGTACACCCAGCTCATCGGCCGCCCTGCCCCCATGCCGTACTGGTCATTCGGGTTCCACCAGTGCAGGTGGGGGTACAAGAACGTGTCTGACCTGGAGGGCGTGGTCGCCGGCTATGCCAAGGCGAGGATCCCGCTGGACGTGATGTGGACGGACATCGACTACATGGACGCCTTCAAGGACTTCACGCTTGATCCGGCGAACTTCCCGGCCGACCGGCTCCGGCCGTTCGTCGACCGCCTCCACCGCAACGGCCAGAAGTACGTCGTCATCATTGACCCAGGGATCAGTGTGAACGCGACGTACGGGACGTTCATCCGAGCGATCAAGGAGGACATCTTCTTGAAGTGGAACGGGAGCAACTACCTCGGTGTGGTGTGGCCGGGGAACGTCTCCTTCCCGGACTTCCTCAACCCGCGCGCCGCCGAGTTCTGGGCGCGCGAGATCGCCGCGTTCCGGCGGACCCTCCCCGTCGACGGGCTGTGGATCGACATGAACGAGATCTCCAACTTCGTCGACCCGCCGCCGCTCAACGCGCTCGACGACCCGCCGTACCGCATCGACAACTCCGGCGTGCGCCGCCCCATCAACAACAAGACGGTGCCGGCCTCCGCCGTGCACTACGGCGGCGTGGCCGAGTACGACGCGCACAACCTCTTCGGCTTCCTCGAGGCGCGGGCCACGCACGACGCGCTGCTCCGTGACACCGGCCGCCGCCCGTTCGTGCTCAGCCGCTCCACGTTCGTCGGCTCCGGCAGGTACACCGCGCACTGGACCGGCGACAACTTCGCGACGTGGGACGACCTCCGCTACTCCATCAACACTATGCTTAGCTTCGGCCTCTTCGGCATCCCCATGATCGGTGCCGACATCTGCGGCTTCGGCGGAAACACCACCGAGGAGCTCTGCAGCCGATGGATTCAGCTTGGCGCGTTCTACCCGTTCTCGAGGGACCACTCGGCGATCGGCACCGTCCGGCGAGAGCTGTACCTGTGGGAGTCGGTGGCGAGGTCGGCGAGGAAGGCGCTCGGCCTGCGCTACCGGCTGCTCCCCTACTTGTACACGCTCATGTACGAGGCGCACACCACGGGCGCGCCCATCGCGCGGCCGCTCTTCTTCTCCTACCCCGGCGACGTCGCGACGTACGGCATCGACAGGCAGTTCCTGCTCGGCCGCGGCGTGCTCGTGTCACCGGTGCTCGAGCCGGGCGCGACCACCGTCACCGCCTACTTCCCGGCGGGACGGTGGTTCAGCCTCTACGACTTCTCCCTCGCCGTCGCCACGAAGACCGGCAAGCGCGTGACGCTGCCCGCGCCGGCGGACACGGTGAACGTGCACGTCGCCGGCGGGAACATCCTGCCGCTGCAGCAGCCCGCGCTGACGTCGTCGCGCGTGCGCCAGAGCGTGGTCCACCTCCTGGTCGCCCTCGCCGAGGACGGCACGGCCACCGGGGATCTCTTCTTGGACGACGGCGAGTCGCCGGAGATGGTCGGGGCGCGGAGCAGGTGGAGCCAGATCAAATTCAGCGGCGCGACCGAGAGCGGCGGCAGCGTCGTCAGAGTGAGGTCGCACGTGGTGCACGACTCGTACGCGCCGAGCCGGACGATGGTCATCGCCAAGGTGGTGCTCATGGGGCTTCGATCGCCGGCGCCGCCCAAGGGGTTCGCTGTTTATGCCAACGGCGTCCAGGTGAACGCGAGCACGGCGGTCGACGGCGGCGGCGGCGGGAACCCGGAGAAGGGAGCGCTGGGCGTGGCGCACGTCGGCGGGCTGTCGCTGGTCGTCGGGCAGGAGTTCGATCTCAAGGTCGTTATGACCTATTAA</cdnaseq>

Protein Sequence

<aaseq>MATRARPPLVLLLCLCLASCLSSAIGGVSAAGNGYRTTAFLVDEGGRRLRAELAAVAGAGGGSTAAYGDDVQRLDVYASLETDSRLHVRIADADGPRWEVPQDVIPRPSPEFFLQTSRPGRPVLSTATSDLTFAIHASSPFRFAVSRRSTGDVLFDTSPNLVFKDRYLELTSSLPPPGRASLYGLGEQTKRTFRLQRNDTFTLWNSDIAAGNVDLNLYGSHPFYMDVRSGGGGAAHGVLLLNSNGMDVIYGGSYVTYKVIGGVLDFYFFAGPSPLAVVDQYTQLIGRPAPMPYWSFGFHQCRWGYKNVSDLEGVVAGYAKARIPLDVMWTDIDYMDAFKDFTLDPANFPADRLRPFVDRLHRNGQKYVVIIDPGISVNATYGTFIRAIKEDIFLKWNGSNYLGVVWPGNVSFPDFLNPRAAEFWAREIAAFRRTLPVDGLWIDMNEISNFVDPPPLNALDDPPYRIDNSGVRRPINNKTVPASAVHYGGVAEYDAHNLFGFLEARATHDALLRDTGRRPFVLSRSTFVGSGRYTAHWTGDNFATWDDLRYSINTMLSFGLFGIPMIGADICGFGGNTTEELCSRWIQLGAFYPFSRDHSAIGTVRRELYLWESVARSARKALGLRYRLLPYLYTLMYEAHTTGAPIARPLFFSYPGDVATYGIDRQFLLGRGVLVSPVLEPGATTVTAYFPAGRWFSLYDFSLAVATKTGKRVTLPAPADTVNVHVAGGNILPLQQPALTSSRVRQSVVHLLVALAEDGTATGDLFLDDGESPEMVGARSRWSQIKFSGATESGGSVVRVRSHVVHDSYAPSRTMVIAKVVLMGLRSPAPPKGFAVYANGVQVNASTAVDGGGGGNPEKGALGVAHVGGLSLVVGQEFDLKVVMTY</aaseq>

Gene Sequence

<dnaseqindica>1..236#1324..1976#2054..2284#3194..3834#3911..4810#ATGGCGACGAGAGCTCGGCCGCCATTGGTGCTGTTGCTGTGTCTCTGCTTGGCTTCTTGCTTGAGCTCGGCCATTGGTGGCGTTTCAGCTGCCGGCAATGGCTACCGGACCACGGCATTCCTGGTGGATGAGGGAGGGAGGCGGCTCAGAGCCGAGCTCGCCGCAGTCGCCGGCGCCGGCGGCGGGTCCACGGCGGCGTACGGCGACGACGTGCAGAGGCTAGACGTGTATGCCAGGTGCGCGCAGCTCCATTTTAGCATTTTTTTACCGCAATTGTTCGATGAGCTAGCTAGCTTTAATTTTAGCTTTTCTTTCCGAGAATTGCTAAGATCAATTAATTCTTGAGCTCTACTCCTAGAGGGCAGCAGGGAGTACCAGCTAATCACCGTTATTTTTTTTTTATAAAATATGATTTCTAGAAGAGCCAAAATGCCAAAAAAAAAAGAAATCTAGGATTCTCCAGGACGGCTTATCCGGTGCTAGATTATGATATTAAGAGAGAGACATTACCCCTTAGACCAAGTTTAAAACAGATTATTATGGATTAGCTTAGGAAAAGGATCTAAACAACGTGCTAGAAGAACTTTTTTTAGAAAACATATTTTCTACATCCGTACAACAAATAATACAGAACAATAATAAAGTGAAATGACCAAAAAGAACAAGGCCGAAGTTTATGATATTACAAGTAGAGATGCTGAATTGCTGATTGGTCGATTATACATGTATAATCCGTACAATGATTAGGACAACGTACTAGATAAGTCATCTAGAAGAGAAGACTGCTTACAAAAAAAACAAGAGACCACAGAGCGACAAAGCCACAGAGGGTTAAAACCTTAGGTCTGTTTTTTCTTCAACTCCAATCTACAATTTTAGCATTTTCAATTAATTCATTTTTTAAATTATTAAATGATATGTTTTCTAAAAAAACTTCTTACATAAAAGTTTCTTTAAAAAAAACCTACTTTTAAAATTAATAACATTAACATTTATTTATTTATTATTTTAATGGTTTATCTGTGAAGCTAAAAAGCTAAATGAGATTCCAATTGGCAAAATTAAACTGTTTTAAATTTGACTAAATTTATAAAAAAAAATAGTAATATTTTTTACTCAAGATAAATTTATTATAAAAATATATTTAATTATTAATTTAATAAAACTAATTTAGTAATGTAAATATTACTATATTTATATATAAACTTAGTTAAATTTAAAACAGTTTAACTTTGATGAAAATTCAAACATATTGTAATCTGAAACGGAGGGAGTACAAGATAATCACCGTTATTTATATTTTTTTTGGCTCGCCGGCGGCAGCCTGGAGACGGACAGCCGGCTGCACGTTCGCATCGCCGACGCCGACGGCCCGCGATGGGAGGTGCCCCAGGACGTCATCCCGCGCCCCTCGCCGGAGTTCTTCCTCCAGACGTCGCGTCCGGGCCGGCCCGTCCTCTCCACGGCGACCTCCGACCTCACCTTCGCCATCCACGCCTCCTCCCCGTTCCGCTTCGCCGTCTCCCGCCGCTCCACCGGCGACGTCCTCTTCGACACCTCCCCCAACCTCGTCTTCAAGGATCGCTACCTCGAGCTCACATCCTCGCTGCCGCCGCCCGGCCGCGCGTCGCTGTACGGCCTCGGCGAGCAGACCAAGCGCACGTTCCGGCTCCAGCGGAATGACACCTTCACGCTCTGGAACTCCGACATCGCCGCCGGCAACGTCGACCTCAACCTCTACGGCTCCCACCCCTTCTACATGGACGTCCGGTCAGGCGGCGGCGGCGCGGCGCACGGCGTGCTCCTCCTTAACAGCAACGGCATGGACGTCATCTATGGTGGATCGTACGTCACCTACAAGGTGATCGGCGGCGTGCTGGATTTCTACTTCTTCGCCGGCCCGTCCCCTCTCGCCGTCGTCGACCAGTACACCCAGCTCATCGGCCGCCCTGCCCCCATGCCGTACTGGTCATTCGGTAAGCTAGCTCTCTGTTTTGCTCTGCTTCTTCTTGCATGATCTCGCCGCCGACATTGTTGCGGTGCGTCGTTGCAGGGTTCCACCAGTGCAGGTGGGGGTACAAGAACGTGTCTGACCTGGAGGGCGTGGTCGCCGGCTATGCCAAGGCGAGGATCCCGCTGGACGTGATGTGGACGGACATCGACTACATGGACGCCTTCAAGGACTTCACGCTTGATCCGGCGAACTTCCCGGCCGACCGGCTCCGGCCGTTCGTCGACCGCCTCCACCGCAACGGCCAGAAGTACGTCGTCATCATTGACCCAGGTACACAAGATCGATGGATCGCTTCAATGGTGAAATTTTGATCGGTGAAATTTTGAGCAAAATTTAGTTGAATTTGAACAAATATTACCAAAAATTCATGAAATAAATAAATAAATTCGGCCAAAATAATGTCGTATCGGAGGGGGTCCAAAATGACCGAAATTTCAGTCCGAAATTTTCAACCCTGATTCTGTCATCAGTCGGGAAACTCTTTTAATCACCCGGTGGATGTCCACCCGTTTATTACATGTCATCTAAATAGTTATGAATTTTTTTTAAAAAAAAATTGACAAGATAGATCAATATGTAATATATCACTTCACAAATATGAAAGTTAAAATTAAACTTCTACAAATTGTAACAAAAATAACTTAAATTAGCATACTCATATTTGCAGTTGAATTTGTTATTTTTGTTACAACTTGTAAAAGTTGAATTTGAACTTGCATATTTATGGAGTGATATATTACATATAAATATATCTTGTTAATTTTTTTAAAAAATTTCATAACTGTTTAGGCCATGTTTCTTTCAGCTTGGGATTATTATAATCCTGATTATTAGGAGTAAGCTAAAAAAAACAAACAACTTATTGAAATAGCTTATTATAATCTGATAAGATCATTTAGGTGAGCTTTTTCTAGATTATTGGGTAAAAAATTACCTACCATACCACCCCACTCCCTCTGTAGACTTACAAACCCAATAATATAGGCTCTAATAATCTACAAAAGAAACAATTAACTGTTTATTCTACTACAGATTATAACAATTTAGTTTATATTAATCTGACTCAATAATTTAGATTATAATAATCTTAAGATGAAAGAAACAGAGCCTTAGTTAACATGTACCACCCGATTAGAATCCATCTCCGTCGTCAGTCACCAATGGCGGTTGTTTTTGTAGGGATCAGTGTGAACGCGACGTACGGGACGTTCATCCGAGCGATCAAGGAGGACATCTTCTTGAAGTGGAACGGGAGCAACTACCTCGGTGTGGTGTGGCCGGGGAACGTCTCCTTCCCGGACTTCCTCAACCCGCGCGCCGCCGAGTTCTGGGCGCGCGAGATCGCCGCGTTCCGGCGGACCCTCCCCGTCGACGGGCTGTGGATCGACATGAACGAGATCTCCAACTTCGTCGACCCGCCGCCGCTCAACGCGCTCGACGACCCGCCGTACCGCATCGACAACTCCGGCGTGCGCCGCCCCATCAACAACAAGACGGTGCCGGCCTCCGCCGTGCACTACGGCGGCGTGGCCGAGTACGACGCGCACAACCTCTTCGGCTTCCTCGAGGCGCGGGCCACGCACGACGCGCTGCTCCGTGACACCGGCCGCCGCCCGTTCGTGCTCAGCCGCTCCACGTTCGTCGGCTCCGGCAGGTACACCGCGCACTGGACCGGCGACAACTTCGCGACGTGGGACGACCTCCGCTACTCCATCAACACTATGCTTAGCTTCGGCCTCTTCGGCATCCCCATGATCGGTGCCGACATCTGCGGCTTCGGCGGAAACACCACCGAGGAGCTCTGCAGCCGATGGATTCAGGTAACAGAACACGTCGAGCTCTCATGTCCTCCATTAATGGCGTAAGTAAGTTTGAGCTTGGTTTGTGTGTTTGAAGCTTGGCGCGTTCTACCCGTTCTCGAGGGACCACTCGGCGATCGGCACCGTCCGGCGAGAGCTGTACCTGTGGGAGTCGGTGGCGAGGTCGGCGAGGAAGGCGCTCGGCCTGCGCTACCGGCTGCTCCCCTACTTGTACACGCTCATGTACGAGGCGCACACCACGGGCGCGCCCATCGCGCGGCCGCTCTTCTTCTCCTACCCCGGCGACGTCGCGACGTACGGCATCGACAGGCAGTTCCTGCTCGGCCGCGGCGTGCTCGTGTCACCGGTGCTCGAGCCGGGCGCGACCACCGTCACCGCCTACTTCCCGGCGGGACGGTGGTTCAGCCTCTACGACTTCTCCCTCGCCGTCGCCACGAAGACCGGCAAGCGCGTGACGCTGCCCGCGCCGGCGGACACGGTGAACGTGCACGTCGCCGGCGGGAACATCCTGCCGCTGCAGCAGCCCGCGCTGACGTCGTCGCGCGTGCGCCAGAGCGTGGTCCACCTCCTGGTCGCCCTCGCCGAGGACGGCACGGCCACCGGGGATCTCTTCTTGGACGACGGCGAGTCGCCGGAGATGGTCGGGGCGCGGAGCAGGTGGAGCCAGATCAAATTCAGCGGCGCGACCGAGAGCGGCGGCAGCGTCGTCAGAGTGAGGTCGCACGTGGTGCACGACTCGTACGCGCCGAGCCGGACGATGGTCATCGCCAAGGTGGTGCTCATGGGGCTTCGATCGCCGGCGCCGCCCAAGGGGTTCGCTGTTTATGCCAACGGCGTCCAGGTGAACGCGAGCACGGCGGTCGACGGCGGCGGCGGCGGGAACCCGGAGAAGGGAGCGCTGGGCGTGGCGCACGTCGGCGGGCTGTCGCTGGTCGTCGGGCAGGAGTTCGATCTCAAGGTCGTTATGACCTATTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA023458