BGIOSGA023466

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Revision as of 13:33, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA023466| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA023466, complete gene.| tag = OsI_241...")
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Gene Name

BGIOSGA023466

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA023466, complete gene.

LocusTag

OsI_24169

Ensembl Transcript ID

BGIOSGA023466-TA

Ensembl Protein ID

BGIOSGA023466-PA

Length

2950

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:30088138..30091087

Sequence Coding Region

30088138..30088325,30089102..30089207,30089710..30090254,30090499..30090958,30091079..30091087

Genome Context

<gbrowseImage1> name=IndicaChromosome06:30088138..30091087 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:30088138..30091087 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGACACCCCTTCCTCGTCGGGCTCCGGGGGGCACCTGCTGCACCTCCACCGCAGCGGCGGGTCCAGCTTCCGCCGCCGCCTCCGCCCGGGCGCGGCCGGGGAGGCCGGGACGCCGCTCGGCGGCGTCTCGTACGTCAGCACGCCCATCCCCGACGACGACGACGCGTTCGATGTCGGGGCTAATAGATTGGAAACATTATATTCTAATATTGAGATGAACGGGCAGTATAAGGTTTTAACTTATAGTAGTAACACGATTGCCCTTATGCAACAAGGAGGGCTGAGGATCCAGGCTGGAGAGAAATGGAAAGAGGAAGAAACAGTCGAGCTTGAGGGATCTTTGGGCAAAAGCAATGCTGTTAATCAGGAACTAGTTGCATTGGAGAGAGAGCTCGCAACACATCGGAGAACTGGTGCTATTGATTCATTTTGTTTGTACTTGTATGGCATTGTTCTACGTGATAAAGGCAGTGAAGCTCTAGCTAGAACAGTTCTGGTGGAATCTGTCAACAGCTACCCGTGGAACTGGAGTGCTTGGTTAGAATTACAATCTCTCTGCACTAGCAGTGACATTTTGAACAACTTAAATCTCAAGAATTACTGGATGAAAGATTTCTTCCTTGCTAGTGCACATCTTGAACTAAAAATGCATGAAGAAGCTTTGAAAAGATATGAGCGCTTAATGGGGGTCTTCCGTTGCAGTGACTACATTCAGGCTCAAATAGCTACTGTGCAGTATAGTATGAGAGATCTGGATGAAGCTGACATGATTTTTGAAGAACTCCTTAGGACTGATCCTTTTCGTGTGGATTCTATGGACGTTTACTCAAATTTATTGAGAGCTGTTGATATAAATCCCAGAGATTACCGTGCTTGGTATGGTCTTGGTCAGATCTATGAGATGATGGGAATGCCGTTTTATGCAGTTTATTACTTCCGTAAATCGTCATACCTACAACCTAATGATGCCCAGCTTTGGAATGCTATGGCTCAGTGCTATGAAAGCGATCAACTCCAGATGATTGAAGAAGCCATCAAGTGCTATGAGAGATCTGCAAATAATAATGACACTGAAGGAATAGCACTTCATCAGCTAGCAAAGTTACATGGTATGCTTGGACAATCTGAGGAGGCAGCATTTTACTACAAGAAGGATTTAGAGAGAATGGAAGTTGAGGAAAGGCAGGGCCAGAATTTTGTTGAAGCTCTGCTTTTCCTTGCTAAGCACTGTAAGAGCATAGGCAGGTTTGAGGAGGCAGAGCACTATTGCACAAGGCTCTTGGATTACACCGGTCCATTCAAATAG</cdnaseq>

Protein Sequence

<aaseq>MDTPSSSGSGGHLLHLHRSGGSSFRRRLRPGAAGEAGTPLGGVSYVSTPIPDDDDAFDVGANRLETLYSNIEMNGQYKVLTYSSNTIALMQQGGLRIQAGEKWKEEETVELEGSLGKSNAVNQELVALERELATHRRTGAIDSFCLYLYGIVLRDKGSEALARTVLVESVNSYPWNWSAWLELQSLCTSSDILNNLNLKNYWMKDFFLASAHLELKMHEEALKRYERLMGVFRCSDYIQAQIATVQYSMRDLDEADMIFEELLRTDPFRVDSMDVYSNLLRAVDINPRDYRAWYGLGQIYEMMGMPFYAVYYFRKSSYLQPNDAQLWNAMAQCYESDQLQMIEEAIKCYERSANNNDTEGIALHQLAKLHGMLGQSEEAAFYYKKDLERMEVEERQGQNFVEALLFLAKHCKSIGRFEEAEHYCTRLLDYTGPFK</aaseq>

Gene Sequence

<dnaseqindica>1..188#965..1070#1573..2117#2362..2821#2942..2950#ATGGACACCCCTTCCTCGTCGGGCTCCGGGGGGCACCTGCTGCACCTCCACCGCAGCGGCGGGTCCAGCTTCCGCCGCCGCCTCCGCCCGGGCGCGGCCGGGGAGGCCGGGACGCCGCTCGGCGGCGTCTCGTACGTCAGCACGCCCATCCCCGACGACGACGACGCGTTCGATGTCGGGGCTAATAGGTACCTGCTCGCCAAGGCCTAATTCGACTGCCGCGAGTACCGCCGCGCCGCGCACGTCCTGCGCGGCCAGACCGGCCGCAAGGCCGTGTTCCTTCGCTGCTATGCCCTGTACACGGTGACTTCGGATCCTATTGTTTTTCTTTTTAATTATTATTTTGGAATGCGCGGGCGTGTTCCAGTTTGCAGATGTTTGGTATAGCGACTAGTGCTTGTCTGCTTGAGGAAATGTCTCACTGGAGCTGCTGCAAATATTTACGGCTCCAATTCGCCTATAGAGTGATTCATATTTCTCAACCTGTAGAAACATCTGATTAGTTATCTTGACGTGTCAATGGAGTAATAGTAGTGGGATCTTACTGAAAGAAACAATAGGAATACATCAAAATTATTGTAAAAATGTAAAAGTAGCTTTATTTGGTATGTTCCCCTTTGTTCATGGTCTGAGCGCTAATCTTTGAAGCCCTAGGGGTGGAGATGCTAGCATTTTTGAGTCTTAATTACCCCCCTTGTCCCATAATGATGTACTACTGATTTTTGGCACTTTAAACCTTAATTTGGTAAATGTCTCGACATCTGAAAAAATGTTGAACCCTTTATTGTACATAACTGCTTATTTGCTTCGTTCCTAGTTGTTTGGTATCCTTTATGCATTACAGTGATGCTTGATTATTTTTATAGTAAGCGGTAGATGCTGGTTTGCTGCAATGTTAACATTAGACGAATTTATTGCATGCAAGAATGCATTTTACTAATACAGTGGTTCTGTTGTAATGAAGATTGGAAACATTATATTCTAATATTGAGATGAACGGGCAGTATAAGGTTTTAACTTATAGTAGTAACACGATTGCCCTTATGCAACAAGGAGGGCTGAGGATCCAGGTCCATAAATGATTTATCTTTTCCTCTTTGCTATTTAATTTGTGATCTGCTAAAAATAGGAGTATAGGACTCGCCACAGTAATACAGTGTATAATTGTGCGCTTGGGGCTATGTTGCTTTTGGTTGCTAGTGTGCCACTAACGAATAGTGGCTAGTATTGAAGTATTGAATTTAGAACCATGCTGATTTCCATTTTAGCAGGTCCTTTTATTAGCTGGATTTCTATTTAAGTTGGCAAGCTGCACTGTTAATATGTACAATTAGTGTCAATCTTTGCATCAATTTACGTCTCTATACACTAGGCCCTAAACTTATTGGATCGTATAAATGTGGCTAGCAATCTTCCGATCCATGGAAGGATACTATGAATGAGTTATCTTTTCCTCTACAGGTTATCTAATTTTCTAAATACTAGAAATTGTCTCCTGTTTGCTTCGTAGTTTAATTAGCATTTTGAAATTTGATATGTTTGGTGATAATAGTTATTTTCTCTACAATTTAGGCTGGAGAGAAATGGAAAGAGGAAGAAACAGTCGAGCTTGAGGGATCTTTGGGCAAAAGCAATGCTGTTAATCAGGAACTAGTTGCATTGGAGAGAGAGCTCGCAACACATCGGAGAACTGGTGCTATTGATTCATTTTGTTTGTACTTGTATGGCATTGTTCTACGTGATAAAGGCAGTGAAGCTCTAGCTAGAACAGTTCTGGTGGAATCTGTCAACAGCTACCCGTGGAACTGGAGTGCTTGGTTAGAATTACAATCTCTCTGCACTAGCAGTGACATTTTGAACAACTTAAATCTCAAGAATTACTGGATGAAAGATTTCTTCCTTGCTAGTGCACATCTTGAACTAAAAATGCATGAAGAAGCTTTGAAAAGATATGAGCGCTTAATGGGGGTCTTCCGTTGCAGTGACTACATTCAGGCTCAAATAGCTACTGTGCAGTATAGTATGAGAGATCTGGATGAAGCTGACATGATTTTTGAAGAACTCCTTAGGACTGATCCTTTTCGTGTGGATTCTATGGACGTTTACTCAAATTTATTGTATGCAAAGAAAGCTCGACTGCTTTAAGTTTCCTTGCTCACAGAGTATTTTTGACAGATAAATATCGCCCAGAATCATGCTGCATAATTGCAAATTACTACAGTTTGAAGGGGCAGCATGAAAATCAGTTTTGTACTTTCAAAGAGCACTGAAGCTTAATCGAAAGTATCTTTCAGCTTGGACCCTTATGGGACATGAGTTTGTTGAGCTAAAAAATACACCTGCTGCGATTGATGCCTACAGGAGAGCTGTTGATATAAATCCCAGAGATTACCGTGCTTGGTATGGTCTTGGTCAGATCTATGAGATGATGGGAATGCCGTTTTATGCAGTTTATTACTTCCGTAAATCGTCATACCTACAACCTAATGATGCCCAGCTTTGGAATGCTATGGCTCAGTGCTATGAAAGCGATCAACTCCAGATGATTGAAGAAGCCATCAAGTGCTATGAGAGATCTGCAAATAATAATGACACTGAAGGAATAGCACTTCATCAGCTAGCAAAGTTACATGGTATGCTTGGACAATCTGAGGAGGCAGCATTTTACTACAAGAAGGATTTAGAGAGAATGGAAGTTGAGGAAAGGCAGGGCCAGAATTTTGTTGAAGCTCTGCTTTTCCTTGCTAAGCACTGTAAGAGCATAGGCAGGTTTGAGGAGGCAGAGCACTATTGCACAAGGCTCTTGGATTACACCGGTCCAGTAAGTTCAATTTTAAAAGTTCCTTTTACCTACTGATGAAAATAACAAAAGATGGAATGGAGCAAATAGACTTCTTATTTATTGGCTAATGTGTTAATGAACACTTATGTTTGCGTACAGTTCAAATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA023466