BGIOSGA023492

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Revision as of 13:33, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA023492| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA023492, complete gene.| tag = P0623A1...")
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Gene Name

BGIOSGA023492

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA023492, complete gene.

LocusTag

P0623A10.10

Ensembl Transcript ID

BGIOSGA023492-TA

Ensembl Protein ID

BGIOSGA023492-PA

Length

6386

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:30512572..30518957

Sequence Coding Region

30512572..30512717,30512805..30512886,30512987..30513039,30513140..30513194,30513321..30513459
,30513538..30513592,30514444..30514666,30514751..30514846,30515812..30515931
,30516041..30516166,30516473..30516628,30517374..30517490,30517810..30517932
,30518017..30518084,30518223..30518358,30518469..30518634,30518719..30518957

Genome Context

<gbrowseImage1> name=IndicaChromosome06:30512572..30518957 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:30512572..30518957 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCTCTCCCGCGCAGCCTCTCTCCGCCGCTCCACGGCGGCGGCCTTCTCCACCGCCGCGGCGAGGCCGGAGACCGGGCTGTACGGCTTCGATGTGCTGCGCACGGCCAAGGGCTTCCGCCGCTTCGTCGACGACGCCATCGAGAGGTCGGACGAGCTCGTGGCCTACATCGGGCAGCTGCCGCCGTCCGCGGAGATTGTCCGCGCCATGGATGAGATATCGAACACTGTCTGCTCAGTTATTGATTCGGCAGAGCTGTGCAGGAATACGCACCCAGATAAGGAATTTATGGATGAGGCAGATAAGGCATCAATGAGGATTTATGAACATCTTCAATATCTGAATACCAATACTACTTTGTACAATGCAATACTTAAAGCTGAGAGCGAAGGTGTCATGCTCACAGAGGAAGCTCGAAGGGCAGCCACCACCTTGCGTGTTGACTTTGAGAAAGGGGGAATTCATCTTCCTAAAGATAAACTCGAACATGTTAATCATCTGAACCTTGAGATTGCCCAGCTGGGTCGAAAGTTCAGTGAAAATGTTATGAACAAACCAGGTTTTGTGGATATATATCCAGCTTCGCGCATTCCAAGAAATATGCAACGCCATTTTAAATCCATTCACAGTATTAAACCTTGGGGCGATGAGGAACAAAGAAATCAAATGGACACTACAAAGCAAAAGGGTCTAAGGATAGTTACTGATTCAGGAACTCTATCAACAGCACTGAGATGGGTCCCAGATGAGGAAATCAGGAAACAGGTATACCTGGTAGGAAACTCTGAACCTCGTGAAAACATTACAGTTCTTGGCAAGCTTATAAATGCACGTGACGAGCTTGCGAAGACTATGGGATGCAAATCATATGGTGATTTTGCTATTCGTCCTAACATGGCTGCATCTGTAGATGTCGTGATGTCATTTCTCAAAGATTTGAGTGGCGCGGTTAGGCATAAAGCTGGTGAGGAATTTAAACGTATACAGGACTTCAAGAGAAATGTATGCAATGAAAAGAGTGCTAAACTTGAACCCTGGGATGAGGATTACTTCATTGGAATGATGAAATCAGCTGTACATAACCTGGATGTCTCAGTGGTTGCAGCATACTTTCCATTGTCCCAGTGCCTAAAGGGCTTAAACGTGCTGGTGGAATCATTATTTGGTGCCACATTTCATCAAATTCCTATGGGGGACGGCGAGTCATGGCATCCAGATGTGATGAAGTTGTCTCTCCATCATCCTGATGAGGGCAATTTAGGATTTATGTATCTTGATCTGTACTCCAGAAAGGGTAAATATCCAGGGTGTGCTCACTTTGCTATCAGAGGGGGGCGACGATTGCAAGACTCAAATTACCAGCTTCCAATCGTTGCTCTAGTTTGCAATTTTTCAAGTTCGAGCAAAATAATGGCAAGGCTTAACCATTGGGATGTTGAAACTCTGTTTCATGAGTTTGGCCATGCCCTTCATTCTCTACTCTCAAGAACGGAGTATCAACATTTCTCTGGTACTAGAGTTGCTCTTGATGTGGCTGAAACGCCATCAAACCTCTTTGAGTTTTATGCATGGGATTATCGTGTCTTGAGGAAATTTGCTGTAGATGAAACAACTGGTGATCCAATACCAGAAAAGTTGGTAAAGGCACTTAATGCTTCTCGGAACATGTTTCCAGCAACGGAGCTGCAGCGTCAGATTTTCTATTCTATAATGGACTTGACTTTGTTTGGGGAGCAAGGATCCAAGCCAATGGACACAATTTCTACTGTAGCTGATTTGAGGAGAAAGCATACAAGTTGGAAATGTGTAGAAGGCACACACTGGCATACTAGATTTACTCATCTGATAAATTATGGCGCTGGCTACTATAGTTATCTTTATGCTAGATGTTTTGCCACAACTATATGGCAAGAAGTATGCCAAGGTGATCCATTATCCCGCAGCACGGGTAGTGCACTTAGGGACAAATTTTTGAAGCATGGTGGAGCTAAGGATCCTTCTGCCCTGTTAAAGGATTTCGTAGGTGATTCCATTATTATAAACTCTGGAGGAGGAATAATCCCTGACATTAGCTCCTTGTGTAAAGAAGTCGGTTTGTGA</cdnaseq>

Protein Sequence

<aaseq>MLSRAASLRRSTAAAFSTAAARPETGLYGFDVLRTAKGFRRFVDDAIERSDELVAYIGQLPPSAEIVRAMDEISNTVCSVIDSAELCRNTHPDKEFMDEADKASMRIYEHLQYLNTNTTLYNAILKAESEGVMLTEEARRAATTLRVDFEKGGIHLPKDKLEHVNHLNLEIAQLGRKFSENVMNKPGFVDIYPASRIPRNMQRHFKSIHSIKPWGDEEQRNQMDTTKQKGLRIVTDSGTLSTALRWVPDEEIRKQVYLVGNSEPRENITVLGKLINARDELAKTMGCKSYGDFAIRPNMAASVDVVMSFLKDLSGAVRHKAGEEFKRIQDFKRNVCNEKSAKLEPWDEDYFIGMMKSAVHNLDVSVVAAYFPLSQCLKGLNVLVESLFGATFHQIPMGDGESWHPDVMKLSLHHPDEGNLGFMYLDLYSRKGKYPGCAHFAIRGGRRLQDSNYQLPIVALVCNFSSSSKIMARLNHWDVETLFHEFGHALHSLLSRTEYQHFSGTRVALDVAETPSNLFEFYAWDYRVLRKFAVDETTGDPIPEKLVKALNASRNMFPATELQRQIFYSIMDLTLFGEQGSKPMDTISTVADLRRKHTSWKCVEGTHWHTRFTHLINYGAGYYSYLYARCFATTIWQEVCQGDPLSRSTGSALRDKFLKHGGAKDPSALLKDFVGDSIIINSGGGIIPDISSLCKEVGL</aaseq>

Gene Sequence

<dnaseqindica>1..146#234..315#416..468#569..623#750..888#967..1021#1873..2095#2180..2275#3241..3360#3470..3595#3902..4057#4803..4919#5239..5361#5446..5513#5652..5787#5898..6063#6148..6386#ATGCTCTCCCGCGCAGCCTCTCTCCGCCGCTCCACGGCGGCGGCCTTCTCCACCGCCGCGGCGAGGCCGGAGACCGGGCTGTACGGCTTCGATGTGCTGCGCACGGCCAAGGGCTTCCGCCGCTTCGTCGACGACGCCATCGAGAGGTAAGGGGTGGAGATACTGAACCGCAACCTACTCATCTGGAAGCTGGAGCCATCCATTGGCTGCTGAGATTTTACTGAAACGCGCAGGTCGGACGAGCTCGTGGCCTACATCGGGCAGCTGCCGCCGTCCGCGGAGATTGTCCGCGCCATGGATGAGATATCGAACACTGTAGCCTACTTCCTCTTCTGCTAATGATTTTTTTGCGGAATTAGTACTTGAGTTGGTATTGAGGGAGTGATGTGCGTTTTATACTTGATGATTTGGTTAGGTCTGCTCAGTTATTGATTCGGCAGAGCTGTGCAGGAATACGCACCCAGATAAGTGAGTGTACACTGGTTACTGGTTGCTTCTTATGAAAATCATACTCTGGAGCAATGTGTTTTAGTTTTGAGTGGCCAATTACATGTGTATTCTGTGCCAGGGAATTTATGGATGAGGCAGATAAGGCATCAATGAGGATTTATGAACATCTTCAAGTAAGCTCGATAACATGGATGTTGCATACCCAAATAGTTGGTTTGAGGAAAAAATGAGGGAGAGAACTTAGTGAAATGACCAAGTCAGAACCATTAAATTTCCTTTTTCCCTGTAATTCTATGCAGTATCTGAATACCAATACTACTTTGTACAATGCAATACTTAAAGCTGAGAGCGAAGGTGTCATGCTCACAGAGGAAGCTCGAAGGGCAGCCACCACCTTGCGTGTTGACTTTGAGAAAGGGGGAATTCATCTTCCTAAAGGTTGGCCTACTAGAGTTATACTGGTGCTTCTTGTTTTCCACTTGAGTGTTGCTAAAAGTATAATTTCTTCCATGGCAGATAAACTCGAACATGTTAATCATCTGAACCTTGAGATTGCCCAGCTGGGTCGAAAGTAGGTACATGAATTGTATAATAGACAGTGGCTGTCATTGTACTATTTTTTGTTGAACTTTTCATATTAGCTTTGCATTCCTTGTTCCAGTTGCATGTCTGCCAGACTGCAACTTACTATCAGCAAGCGATCTCATTATTTGGTGACATTTGCTTGTTGGTAAGATATATATGTTCAACATATATGGTGTTGAGTTCATATTAACCCTTGGGAGATGCTTCTGTTCTGAAAATATATCATTATTTAGCTTGTTTGACTGCATAGAGTCTATAGGGATGTGTGTCAAGCTGTCTTACTGCCTGCTAATTTGCTGTATAGCTGTTCTGTTACAATGCTTAAAAATAGCGGGATCATATTACCTACTAAATAATTCTTAGTAGTCCTCACATCATCATATTACTAATGTATAAATGGTTTAGTTTATGCACAGACTGCTAGTGCTAAGTATGAGGCTAAGGTGTATATCGATCTGTTCAATGATGCACTTGTTCAATTTATTTCCCATCTCTTTTCCATTATCATTAGAAATGCGAGAAATGATATTGAATCTCCTTGCACACACACAATATGCATGTGGCTTATAAGTGTATTCGTAAATGGTCTCTCATTCAAATGGCATTCTGATCGCTATAAGGATATCTATTAATTTTACTTTTTTTTTTCCATTTAACTGCACAGTTCCATTGTGGCTTTCCTGTTTCTTTGCCTGTCCAGTACATTTCCCTACCGCCCCTTTCTTTTCACTGAATTGATTCTGTGAATTGTAATTAATGCCATGCCTGTTGATTTGAGGTTCTAAAATGTATAAATTTGCTTGTTGCTAGTGAACTTACTCATTTTTTCTGTGCCAGGTTCAGTGAAAATGTTATGAACAAACCAGGTTTTGTGGATATATATCCAGCTTCGCGCATTCCAAGAAATATGCAACGCCATTTTAAATCCATTCACAGTATTAAACCTTGGGGCGATGAGGAACAAAGAAATCAAATGGACACTACAAAGCAAAAGGGTCTAAGGATAGTTACTGATTCAGGAACTCTATCAACAGCACTGAGATGGGTCCCAGATGAGGAAGTATGTTCCCTTTATTCCACTCACCAACCATTAATTATCAATGTATTATATGTTATCAACCTAACATTTCCAAACTTTCCAAAGATCAGGAAACAGGTATACCTGGTAGGAAACTCTGAACCTCGTGAAAACATTACAGTTCTTGGCAAGCTTATAAATGCACGTGACGAGCTTGCGAAGGTAATTTTTTTCATGTTATTGTAGGGCATTTATTTGAAGGAAATAGATGCTATAATGCCATTGTTTTTAAATTTGATTTGTTTATGATTTACTACACTCCATGGTGTACTGTCAACTAGATATGGTCTGTAATACAGAGAAGATGAGGGTTAAGCTATGGTTAGGTTTACTAAAATAGCATGTTTAACATGCATTCTTGTATGCATCAATACCTGATAAATTGCTTGAAGGATATGGTCATGTGGTATCTTGACTCAAAAGGTTTCAACCATGTAATTGAGGAGATAAATTTGAGTTGGCATTATGTGGAAAATATTCCCAGCCAATGGAAGACCAGTTTGTTGATTTAGTTGAGAAGTTTGGATGCAGTTTATTTGTGTTATACCAATGTGCTTGATCTTGACTATTGCAGAATCAAACCTTCCTTTCCAAAGGCCTTGGATGACCTATATAGGCCTCATTGCGTCTATCCTTTAGCAAAATATCTAAGCTAGATGTGACATGTTAAATTTTCTTATCTCACATCATTGGATCCAGTGAGAGTTATCAGTGGCCTGCCCTCTTCCTTTGCAGTAAAATGTGCTGCAGCCTGCAGTATACATTTTTGTAAATGATTTTGCTTGGATCTTACCTGTTGGGACCAATTAGACCCAAAATTTTGTTGGTATTTGTGCTTTGGATATATAGTGCAAGTTGTATTTCTTAATCTAATTGAGTTGTTATTTGGATCACATGTTATAAGTTGATAAAAAAAATCCAATATTTGTTGTGCTTCCTCTTTCCCAAACTTTGTAATTGGAAGAACCAAATTAAAAATTACCTAATTGAGTTTCTAAGTTCGTTTAGGAAATACCATGGTATTTATCACATTAGTAACTTACGGGCAAATGACTGAATATTTTTCAGTATCTACTGCTATTCCAGGACAAGCTAGACTGTTTTCTTATTCTTGTCCTTTTTTCCAGACTATGGGATGCAAATCATATGGTGATTTTGCTATTCGTCCTAACATGGCTGCATCTGTAGATGTCGTGATGTCATTTCTCAAAGATTTGAGTGGCGCGGTTAGGCATAAAGCTGGTGAGGTATGCAAGGGAGTGAACTTCATCAGTGCTAGGGTAGTTTGACATTAATGCATTGATATATTATATCCTACCAGTGTCTCTCTCTCTGTTGATAGTTACCTCTTTGCAGGAATTTAAACGTATACAGGACTTCAAGAGAAATGTATGCAATGAAAAGAGTGCTAAACTTGAACCCTGGGATGAGGATTACTTCATTGGAATGATGAAATCAGCTGTACATAACCTGGATGTCTCAGTATGTACTAATTTTTGTGGGGATGCACTTCAAAATATAGTAGAACTACTTTATAAATTATAACATGTTATTTAGATCACAATCTAGATCTTTATGTAAATTCAACACCATAGGTTGACACAAGCCAAATACAACCGAAATTGGTGCTTGTGGACTAAATCGGTTATGAGGGGAAGAAAAAACACAGTACCCAATTACTTTCTAATTTAATATATGTCAATGAAAAAGTTAATGTGCAGTGATCCCTTTAACATCATTGCATACTTAAAATTTTGCCCTTTTGGGCATTTTTGAAATACCTAACAGGTGGTTGCAGCATACTTTCCATTGTCCCAGTGCCTAAAGGGCTTAAACGTGCTGGTGGAATCATTATTTGGTGCCACATTTCATCAAATTCCTATGGGGGACGGCGAGTCATGGCATCCAGATGTGATGAAGTTGTCTCTCCATCATCCTGATGAGGTACTATTGTGTTAAGCTTAGTTTATTAGTTCTATATAAAAAAATAGTAAACTACTGCATCTTACCCAATCTAACTCTACAAAAGCATGTAACTACATGCTTGAACTTTTGTTATTACGGATACATTTCTAATACGCTAACATTAGGGGGCATGACAATCACTATGTTTCCTTTCTCGAAATGAGCATGCCAGATTATCAATCACACTACTTTGTTTTTGTTACTAAAATCAAAATCAGCAAACACCAGAAATAACTTTTGAATGATAGCCAAGTAAACAAAGAACAAAATTGGCATTCCATGGTTACTGATTAGTAATACATAATAATGATGGAGAGTTGGCCTTGTCCGATTGGTCATTTACTCGTATCCTATTAGCGCATAGTGTAAATACCGTAAACTTGAACAACTAGAAGTATGATGACAGGAATCTGTTACGAAATTATTTATCACCAATGCCATTTAACTATGTAAGATATCATAAAATGTTATGCTATTCAGAGCAAAAAAAATATTTCAAAACTAGTAGACCCAAAGGTATTTTCTTAATAAAATGTATATTTGGATTACAATTATCAGTCCATCTCTTTATGACGCATATATGACCAATTGAATTCTTCTAAGGGGTAGTCTAATCAAGGATCTTGGTTACTACTACTATCACGCACCCACTGTTGAGAGCATCTTCTTAATTTATATTTTACTGGCAGCAAAGTAACCAAAGGAAAACATGTTTAATGAGCAGGGCAATTTAGGATTTATGTATCTTGATCTGTACTCCAGAAAGGGTAAATATCCAGGGTGTGCTCACTTTGCTATCAGAGGGGGGCGACGATTGCAAGACTCAAATTACCAGCTTCCAGTATGTTCTCTTGTATATTTTTATTTCATGAATAACAAGGGAATTGGCATTTCCAAACATTAATGTTGAACTACTTTTTAGGGTTATTTTGTATTTCTGTAGTACTTTGGATGTTTTAAAAAATGTGGAATGCAGAATTTTGCAGCCTTTTTAGCCCAAATATTTGGAACTAAACAAGGCCTAAGGCTTGTGTGCCTTATTTAGATTTATTCTCTTTGTTCAACATAGATGAAGAACTTTTGACAGCATTTAAATGATCCTTACAAGGATAATATCTAAGATTCACGCCACCAATTCACTTCATTCTGATGCTTTTCAGATCGTTGCTCTAGTTTGCAATTTTTCAAGTTCGAGCAAAATAATGGCAAGGCTTAACCATTGGGATGTTGAAACTCTGTTTCATGAGTTTGGCCATGCCCTTCATTCTCTACTCTCAAGAACGGTATTTTGCTGTCCTTTTTTATAATATTTAGGTCTCTCCAATGACTCCAGGATTGCTTATCTGCCAGCATAATGATATTTGCAGGAGTATCAACATTTCTCTGGTACTAGAGTTGCTCTTGATGTGGCTGAAACGCCATCAAACCTCTTTGAGTACGTATGACTTGTTGCTAAAAATAAAACTTTATCCATTAACACTCCCGCAGGGTATCTAATTCTGGCTTATCTAAAATACAGCAGCATTTGTTATTTACCTTCTTTATCAGTAGTTGAGTTCAATTCACATTGCAGGTTTTATGCATGGGATTATCGTGTCTTGAGGAAATTTGCTGTAGATGAAACAACTGGTGATCCAATACCAGAAAAGTTGGTAAAGGCACTTAATGCTTCTCGGAACATGTTTCCAGCAACGGAGCTGCAGCGTCAGGTTTGTTTTTCTTTGTACTTCTTATTTCTCACCCTTAACAATTGGATTTGACCTTGTATGTCCCAATGTGCTGTTTCTTCACTTTGTGTTATTGTGCCTCCGTTCCCCAGATTTTCTATTCTATAATGGACTTGACTTTGTTTGGGGAGCAAGGATCCAAGCCAATGGACACAATTTCTACTGTAGCTGATTTGAGGAGAAAGCATACAAGTTGGAAATGTGTAGAAGGCACACACTGGCATACTAGATTTACTCATCTGATAAATTATGGCGCTGGTAAGCTTTCTATAGTTCAAGAAAATTTCAAGCTTCAGTTTTCATAAAGTATAACTGCTATTCTTTATTTCAACATTATTGCAGGCTACTATAGTTATCTTTATGCTAGATGTTTTGCCACAACTATATGGCAAGAAGTATGCCAAGGTGATCCATTATCCCGCAGCACGGGTAGTGCACTTAGGGACAAATTTTTGAAGCATGGTGGAGCTAAGGATCCTTCTGCCCTGTTAAAGGATTTCGTAGGTGATTCCATTATTATAAACTCTGGAGGAGGAATAATCCCTGACATTAGCTCCTTGTGTAAAGAAGTCGGTTTGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA023492