BGIOSGA023517

From RiceWiki
Revision as of 13:33, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA023517| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA023517, complete gene.| tag = P0550B0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA023517

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA023517, complete gene.

LocusTag

P0550B04.14-1

Ensembl Transcript ID

BGIOSGA023517-TA

Ensembl Protein ID

BGIOSGA023517-PA

Length

2047

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:30903379..30905425

Sequence Coding Region

30903379..30903847,30903950..30904110,30904375..30904454,30904540..30904675,30904764..30904913
,30905243..30905425

Genome Context

<gbrowseImage1> name=IndicaChromosome06:30903379..30905425 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:30903379..30905425 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAGGCCTCTGTACCTGCGCAGCAGCGGCAGCTTCAAGAAGCTGCTCCTCTCCATCGGCCACCGCGGCGCCAAGAACGGCAATGGCGACGCCGCCGCCAAGGAGAGATACACGCCCGCCGCCGCCGCGGCGGCGCCGGAGTCGCCGCGGAAGCCGGCGTGGCGGTGCTTCTCCTACGAGGAGATCCACCGCGCCACGAACGCGTTCCACGAGGGCAACCTGGTGGGGAAGGGCGGGTCGTCGGAGGTGTACCGCGGCGAGCTCCCCGACGGGCGGGCCGTGGCGGTGAAGCGGCTGATGGGCGCGTGGGCGTGCGAGCGGCGGGAGCGCGACTTCCTGGCGGAGCTCGGCACGGTGGGGCACGCGCGCCACCCCAACGTGTGCGCCCTCCTCGGCTGCTGCGTCGACCGCGACCTCTACCTCGTCTTCCACTTCTCCGGCCGCGGCTCCGTCTCCGCCAACCTCCACGACGAGAAGAAGGCGCCGGCGATGGGGTGGGCGGTGCGGTGCGCCATTGCCGTCGGCACGGCGAGGGGGCTGGAGTACCTGCACAAGGGGTGCCAGAGGAGGATCATCCACAGGGACATCAAGGCATCCAACGTGCTTCTCACCGACGACTTCCAGCCTCAGATTTCCGATTTCGGGCTCGCCAAGTGGCTGCCGTCGGAGTGGACGCACCGGGCGATCGCCCCGATCGAAGGAACATTCGGGTGTTTGGCACCGGAGTACTACACGCATGGCATCGTCGACGAGAAGACGGACGTGTTCGCGTTCGGCGTCTTCCTCCTGGAGATCATGACCGGGAGAAAGCCGGTGGATGGCAGCCACAAGAGCTTGCTCAGCTGGGCGAGGCCGTTCCTGAACGAGGGGAGGATCGAGTCGCTGGTGGATCCGAGGATCGGCGGCGACTACGACGGCGAGGAGGCGCGGCGGCTGGCGTTCGTGGCGTCGCTGTGCATCCGCTCGTCGGCGAAGTGGAGGCCATCCATGACCGAGGTGCTGGAGCTGCTGGAAGGCGTCGAGATCCGGCAAGAACGGTGGACGATGCCCGAGGCAGTGGAGGACGACGACGACGAGGAGCTATGGAGATTCGATGACCTGGATGACGAAGATGACGAAGATGAAGAGGAGTTCAACACTGCATCCCCATCTTCTTGCTCATCATCTTTGAGCAATTAG</cdnaseq>

Protein Sequence

<aaseq>MRPLYLRSSGSFKKLLLSIGHRGAKNGNGDAAAKERYTPAAAAAAPESPRKPAWRCFSYEEIHRATNAFHEGNLVGKGGSSEVYRGELPDGRAVAVKRLMGAWACERRERDFLAELGTVGHARHPNVCALLGCCVDRDLYLVFHFSGRGSVSANLHDEKKAPAMGWAVRCAIAVGTARGLEYLHKGCQRRIIHRDIKASNVLLTDDFQPQISDFGLAKWLPSEWTHRAIAPIEGTFGCLAPEYYTHGIVDEKTDVFAFGVFLLEIMTGRKPVDGSHKSLLSWARPFLNEGRIESLVDPRIGGDYDGEEARRLAFVASLCIRSSAKWRPSMTEVLELLEGVEIRQERWTMPEAVEDDDDEELWRFDDLDDEDDEDEEEFNTASPSSCSSSLSN</aaseq>

Gene Sequence

<dnaseqindica>1..469#572..732#997..1076#1162..1297#1386..1535#1865..2047#ATGAGGCCTCTGTACCTGCGCAGCAGCGGCAGCTTCAAGAAGCTGCTCCTCTCCATCGGCCACCGCGGCGCCAAGAACGGCAATGGCGACGCCGCCGCCAAGGAGAGATACACGCCCGCCGCCGCCGCGGCGGCGCCGGAGTCGCCGCGGAAGCCGGCGTGGCGGTGCTTCTCCTACGAGGAGATCCACCGCGCCACGAACGCGTTCCACGAGGGCAACCTGGTGGGGAAGGGCGGGTCGTCGGAGGTGTACCGCGGCGAGCTCCCCGACGGGCGGGCCGTGGCGGTGAAGCGGCTGATGGGCGCGTGGGCGTGCGAGCGGCGGGAGCGCGACTTCCTGGCGGAGCTCGGCACGGTGGGGCACGCGCGCCACCCCAACGTGTGCGCCCTCCTCGGCTGCTGCGTCGACCGCGACCTCTACCTCGTCTTCCACTTCTCCGGCCGCGGCTCCGTCTCCGCCAACCTCCACGGTACCAGCGACACGAACGCGACACCTAACAGCAACAGCACGAACGCGCCGCCATTAATGGCGTTTTGACGTTTCTTGATTTGATTTGATTGCTGCATCGCAGACGAGAAGAAGGCGCCGGCGATGGGGTGGGCGGTGCGGTGCGCCATTGCCGTCGGCACGGCGAGGGGGCTGGAGTACCTGCACAAGGGGTGCCAGAGGAGGATCATCCACAGGGACATCAAGGCATCCAACGTGCTTCTCACCGACGACTTCCAGCCTCAGGTCAGTCTCTTCGGAGACATCCGATAAAATTGGAACGATACAACAAAGATTAGCATGGCCACTACGCAAGGATGACACGCACAAATGGAGAAATAGTCCAAATTTTTTTAGGAGCTGTATTTTTCTCATGCTATATTTAATGAATAAGCACAATCTTGTGCTGGTTCCGTTCAAAAAAAAAAAAGGCGCATCTCATCCACCACATTTCCATTTTTTCCTCACCTCCTCTGTTTCAATTGACATGAACTGATCGTATTATCACAGATTTCCGATTTCGGGCTCGCCAAGTGGCTGCCGTCGGAGTGGACGCACCGGGCGATCGCCCCGATCGAAGGAACATTCGGGTAAAGATTTCTGTGCTCATGGTCGAGTCGAATTCTTGCTGGGTTTGACGGTGAGTTTTGGCTGAAATGACATGGTTTCTTCCAGGTGTTTGGCACCGGAGTACTACACGCATGGCATCGTCGACGAGAAGACGGACGTGTTCGCGTTCGGCGTCTTCCTCCTGGAGATCATGACCGGGAGAAAGCCGGTGGATGGCAGCCACAAGAGCTTGCTCAGCTGGGTAATTCAGCATTCGCGATCAGTATAACTACTGTTTGATCACTGAAAAATTCTGAAACTGTCACTGAATTGTGACCCTGCACTTGCAGGCGAGGCCGTTCCTGAACGAGGGGAGGATCGAGTCGCTGGTGGATCCGAGGATCGGCGGCGACTACGACGGCGAGGAGGCGCGGCGGCTGGCGTTCGTGGCGTCGCTGTGCATCCGCTCGTCGGCGAAGTGGAGGCCATCCATGACCGAGGTAACAAACATGATTGGTCACACTCTGTTCCTTGATCAGAAGGCAACGAACGCTTGCCCATTTCTCAAGTAGGATTGCTGCGATGGAACACTACATTGCTTTACCTACTTGCAAATATTTTTTTCATCAGCATGGTTAGCATTTCCATGTAAACAGTCATAATTTAGGGCAGAGATTCATGACAGGGTGCCCCCCCAAGCACATGTCTCCATGTAGCAGTAACCCACAAACTACTCCTTTGATGATGTTGCTTGGTTTACGTGTAACAACACAAGTAATTTGCAACAGCACTACTAGTAATGTAGGCCATAAATTGGTTGTGGTAGCAGGTGCTGGAGCTGCTGGAAGGCGTCGAGATCCGGCAAGAACGGTGGACGATGCCCGAGGCAGTGGAGGACGACGACGACGAGGAGCTATGGAGATTCGATGACCTGGATGACGAAGATGACGAAGATGAAGAGGAGTTCAACACTGCATCCCCATCTTCTTGCTCATCATCTTTGAGCAATTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA023517