BGIOSGA023575

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Revision as of 13:34, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA023575| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA023575, complete gene.| tag = P0018H0...")
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Gene Name

BGIOSGA023575

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA023575, complete gene.

LocusTag

P0018H04.19

Ensembl Transcript ID

BGIOSGA023575-TA

Ensembl Protein ID

BGIOSGA023575-PA

Length

2654

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:31694438..31697091

Sequence Coding Region

31694438..31694488,31694592..31694700,31694796..31695013,31695443..31695987,31696296..31697091

Genome Context

<gbrowseImage1> name=IndicaChromosome06:31694438..31697091 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:31694438..31697091 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCTCCACGGAGCAGCAAGAATACGCAGTGGCGCTGCTTGACCCCAAGGTAGCAGAAGAAGAAGAAGTATACACAACGGATGGGTCTCTTGACATCGATGGCAACCCGGCGCTGAAGCATCGCACTGGTGGATGGAGAGCATGCCGCTCGATTCTTGGCACCGAGTTCTGCCAATGCCTGGCCTACTTCGGGATGACGATCAACCTCGTCACCTACCTCACCACCGAGCTGCATCAGAGCAATGTCGCCGCCGCCAAGAACGTGTCCACGTGGCAGGCCACCTGCTTCCTCACGCCGTTGGCCGGAGCCATCGTCGCCGATTCCTACTGGGGAAAGTACCACACCATGGTGGTCGGCTGCTGCATCGGCGTCGCTGGCTTGCTCATGGCGTCTCTCTCAGCGCTTCTGCCGCTGCTGATCAAGAACATTTCGACTCTGGCCATGGCTTCAGCTCAAGAATTCGTCTTGTTTCTCGGCCTGTACATGATCGCTTTCGGGGTGGGCGGGCTCCGGCCGTGCCTGATGTCCTTCGGCGCCGACCAGTTCGACGCCGGCGACCCATCGGAGCGCAATAGCAAGGGCTCCTACTTCAACTGGTACCTATTCACCATGAACTGCGCCTCCGTGATATCCACCACCGCCATGGTGTGGTTGCAGGACCACTACGGGTGGGCCCTGGGCTTAGCGATTCCGGCGATGGTTCTCGCCGTCGGGCTGTCCTTCCTGGTCGCCGCGACGCCGGCGTACAGGTTTCAGCGAAACCGTGGGAGCCCTTTCACAAGAGTCTGCCAGGTCGTCGTCGCCGCCGTCCGCAAGTTCAACGTCGCGCCGCCGGTCGACGTCGCCCTTCTCTACGAGGTGCCGGAGGACGACTGCTCCATGGAAAGAGTTAAGAGGATCAAACACACCGATGATCTCCAATTCTTCGACAAGGCCGCCGTCGTGACGGCGTCGGATGAGGAGGCGGCGGGCGATCCGTGGAGGCTTTGCAGCTTGACGCAGGTCGAAGAGCTCAAGATTCTCGTCAGGATGCTGCCTCTGTGGGCGAGCATTGCCTTCTTCTACACCGGGACGGCGCAGGTCAATTCGATGTCCGTCGAGCAGGGCATGGCGATGGACGCCCGCGTCGGCTCCCTCCGCGTCCCGCCGGCCTCGCTGGCAACCTTCGAGTTGCTCACCTCCATGGCACTGATCCCGCTGTACGACCGCGCGTTCGTGCCGGCGGCGAGGAGGCTCACCGGGAGGGAGAAGGGCATTCCCGACCTGCTGAGGATCGGCGCCGGGCTCACCATGGCCGTGCTCGCCATGGCCGCCGCGGCGCTGGTCGAGACGAAGCGCGCCCGCGCTGCGCGGATGGGAATGGAGAAGACGAGCATCGTGTGGCAGGTGCCGCAGTACGCGGTGATGGGCGTGGGCGAGATGCTCGCCTCCGCCGGGCAGCTGGACTTCTTCTACAGCCAGGCGCCGCCCGCCATGAAGACGGTGTGCATGGCGCTTGGTTTCCTCGCCGTCGCGGCAGGGGTATACCTGAGCTCGCTCGTCCTGACCGCCGTGTCGTGGGCGACGGCGACCGGAGGCCGGCCGGGGTGGATCCCCGACGACCTCAACGAGGGGCACCTTGATCGCTTCTTTTGGATGATGGCCGGACTCGGCTGCCTCAATCTGGTGGCGTTCACGAGCTGCGCCATGAGGTACAAATCAAGGAAGGATTGTTAA</cdnaseq>

Protein Sequence

<aaseq>MASTEQQEYAVALLDPKVAEEEEVYTTDGSLDIDGNPALKHRTGGWRACRSILGTEFCQCLAYFGMTINLVTYLTTELHQSNVAAAKNVSTWQATCFLTPLAGAIVADSYWGKYHTMVVGCCIGVAGLLMASLSALLPLLIKNISTLAMASAQEFVLFLGLYMIAFGVGGLRPCLMSFGADQFDAGDPSERNSKGSYFNWYLFTMNCASVISTTAMVWLQDHYGWALGLAIPAMVLAVGLSFLVAATPAYRFQRNRGSPFTRVCQVVVAAVRKFNVAPPVDVALLYEVPEDDCSMERVKRIKHTDDLQFFDKAAVVTASDEEAAGDPWRLCSLTQVEELKILVRMLPLWASIAFFYTGTAQVNSMSVEQGMAMDARVGSLRVPPASLATFELLTSMALIPLYDRAFVPAARRLTGREKGIPDLLRIGAGLTMAVLAMAAAALVETKRARAARMGMEKTSIVWQVPQYAVMGVGEMLASAGQLDFFYSQAPPAMKTVCMALGFLAVAAGVYLSSLVLTAVSWATATGGRPGWIPDDLNEGHLDRFFWMMAGLGCLNLVAFTSCAMRYKSRKDC</aaseq>

Gene Sequence

<dnaseqindica>1..51#155..263#359..576#1006..1550#1859..2654#ATGGCCTCCACGGAGCAGCAAGAATACGCAGTGGCGCTGCTTGACCCCAAGGTCTCGCTGTTACTCAATGCCGATGCCATGTCTATTTTTACTATGCAATTTGCCTGAAATTTCATTGCAGCCTTGCCTGAATTCAACTTGGCTGGGGTTGCAGGTAGCAGAAGAAGAAGAAGTATACACAACGGATGGGTCTCTTGACATCGATGGCAACCCGGCGCTGAAGCATCGCACTGGTGGATGGAGAGCATGCCGCTCGATTCTTGGTAATTTAATTTAGTGTGTTTTGTGATGTTTTCTGTTTGAAAAAGGTGCTTACATTCTTGTTCATGTGATTATCTGAGTGCTTTTGGATATATAGGCACCGAGTTCTGCCAATGCCTGGCCTACTTCGGGATGACGATCAACCTCGTCACCTACCTCACCACCGAGCTGCATCAGAGCAATGTCGCCGCCGCCAAGAACGTGTCCACGTGGCAGGCCACCTGCTTCCTCACGCCGTTGGCCGGAGCCATCGTCGCCGATTCCTACTGGGGAAAGTACCACACCATGGTGGTCGGCTGCTGCATCGGCGTCGCTGTTAGTCACAACCAACTCCCACTACAATCAGTAACTGTATACTGTTGAGGGGATATTCACTTGTTGGTTGCATATCAAATGATTATGGAAAAAAAATTTAAAAAGAAAATGTATTAATATGTGATGTATCACTACACAAACATATAAATACAAATTTAACTTTTATATATTGCAACGGAAAAAAATTGAATTACAGCTAGTTAACGTATATTCAGTATTTTTTTTTGTTGTGACATGTAGAAATTAAATTTTAACTTGCATATTCATAGAATGATATATCACATGTTAATACTTTTTCAATATTTATTTATTTTTTTATAACTATTTGAGTGACATTAAAACAACCAGTCCACATCCCCTTGAGAATTTAAAACCTACTCTCCATGAATTCAGCTCGGGACCTCAAGTTTGGTCTTTTGCTCTGTGCAGGGCTTGCTCATGGCGTCTCTCTCAGCGCTTCTGCCGCTGCTGATCAAGAACATTTCGACTCTGGCCATGGCTTCAGCTCAAGAATTCGTCTTGTTTCTCGGCCTGTACATGATCGCTTTCGGGGTGGGCGGGCTCCGGCCGTGCCTGATGTCCTTCGGCGCCGACCAGTTCGACGCCGGCGACCCATCGGAGCGCAATAGCAAGGGCTCCTACTTCAACTGGTACCTATTCACCATGAACTGCGCCTCCGTGATATCCACCACCGCCATGGTGTGGTTGCAGGACCACTACGGGTGGGCCCTGGGCTTAGCGATTCCGGCGATGGTTCTCGCCGTCGGGCTGTCCTTCCTGGTCGCCGCGACGCCGGCGTACAGGTTTCAGCGAAACCGTGGGAGCCCTTTCACAAGAGTCTGCCAGGTCGTCGTCGCCGCCGTCCGCAAGTTCAACGTCGCGCCGCCGGTCGACGTCGCCCTTCTCTACGAGGTGCCGGAGGACGACTGCTCCATGGAAAGAGTTAAGAGGATCAAACACACCGATGATCTCCAGTGAGTTGCTGTTGGTGAATTTGTAGCTACTCCCTCAGTTTCAGGTTATAAAATGTTTTTGATTTTGGTTAAAGTCAAACTACTTCAAATTTAACAAAGTTTATAAAAAAATAATAATATTTTGACACAAAATAAATTTATTATAAAAGTTTATTTAATTATTAATTTAATAAAACTAATTTAGAATGTAAATATTACTATATTTGTCTATAAACTTAGTTAAAATTAAAACAATTTAATTTTAACAAAAGCCAAAACATCTTATAAACCGATAGTACTAATTCTCAAGATGCATCTGCCATGATCAGATTCTTCGACAAGGCCGCCGTCGTGACGGCGTCGGATGAGGAGGCGGCGGGCGATCCGTGGAGGCTTTGCAGCTTGACGCAGGTCGAAGAGCTCAAGATTCTCGTCAGGATGCTGCCTCTGTGGGCGAGCATTGCCTTCTTCTACACCGGGACGGCGCAGGTCAATTCGATGTCCGTCGAGCAGGGCATGGCGATGGACGCCCGCGTCGGCTCCCTCCGCGTCCCGCCGGCCTCGCTGGCAACCTTCGAGTTGCTCACCTCCATGGCACTGATCCCGCTGTACGACCGCGCGTTCGTGCCGGCGGCGAGGAGGCTCACCGGGAGGGAGAAGGGCATTCCCGACCTGCTGAGGATCGGCGCCGGGCTCACCATGGCCGTGCTCGCCATGGCCGCCGCGGCGCTGGTCGAGACGAAGCGCGCCCGCGCTGCGCGGATGGGAATGGAGAAGACGAGCATCGTGTGGCAGGTGCCGCAGTACGCGGTGATGGGCGTGGGCGAGATGCTCGCCTCCGCCGGGCAGCTGGACTTCTTCTACAGCCAGGCGCCGCCCGCCATGAAGACGGTGTGCATGGCGCTTGGTTTCCTCGCCGTCGCGGCAGGGGTATACCTGAGCTCGCTCGTCCTGACCGCCGTGTCGTGGGCGACGGCGACCGGAGGCCGGCCGGGGTGGATCCCCGACGACCTCAACGAGGGGCACCTTGATCGCTTCTTTTGGATGATGGCCGGACTCGGCTGCCTCAATCTGGTGGCGTTCACGAGCTGCGCCATGAGGTACAAATCAAGGAAGGATTGTTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA023575