BGIOSGA023580

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Revision as of 13:34, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA023580| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA023580, complete gene.| tag = OS06G07...")
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Gene Name

BGIOSGA023580

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA023580, complete gene.

LocusTag

OS06G0708200

Ensembl Transcript ID

BGIOSGA023580-TA

Ensembl Protein ID

BGIOSGA023580-PA

Length

6104

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:31773295..31779398

Sequence Coding Region

31773295..31773366,31773458..31773569,31773644..31773727,31774127..31774153,31774850..31774965
,31775385..31775405,31776383..31776576,31777396..31777537,31777782..31777975
,31778104..31778227,31779099..31779398

Genome Context

<gbrowseImage1> name=IndicaChromosome06:31773295..31779398 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:31773295..31779398 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGTCCTCCCCGCCTCCATCGACGGCGTCCCCCACCTCCTCCTCGCCCTACCGGAAGCTCCTCCACTCCTTGATTTACTGGGCGGTGCAGCGCTGCCGGATGTCGGAGTCGCCGTGCCGGCTCACGGTCTCCGTCAAGCGCTCCCCGGAACCCGCTGGTTCCTCGCCCCTGCGTATATCTGTTTCAGATACTGGAGTTGGGAGCAAGCTGGAGGAGTTCCTGGAGCTAGATGCATTGGCGCGTGAGACCCCCGTGGAGAAATGGGATGGTACCCTCTTAATCACAACTACAGGAATCGATGACAAAGCTATTTATCGTTATCAATTTAATCTTCAAGAAGACACATCTTCAAGCACAAGATTTACCAAGCTAGCGACCATGTACAAAAGTCGTGCTATATTCAGGCAGATATTCGTGCTAAGAGCATCTAATTTAGCATGTGAGCTCTTTGTTGCGCAAACAGACAGTGCTGGATCAGGAGACGTTTGTCTGTCACAAGATTCTGATGATGTCCATATTTCCATTACCACATCAAGTATTGACCGTCTAGTTTCTGGCCTTAAAGATTATGCACTCTCACATGCTAACACATCTGACAGGTGTGAAGCATGCTACATGAACAGAGATCGCCTGAAGATTGGAACTGGAACAGCAAAATATGTAGACAAAAGAAAAGCTAAAGGGCAACTTGTTGAAGTAGTGATAATGATTGCACCTACTTCATCTGATTTGAGCTGTTGGATGACAAATTGTTCATCTACACAGGTTTTGCATTTTGTAGAGTTCATACCATGTCCAATCTCACAATCCTCCCTCAGTGCGCTGATGAGCATAGACTGGCAAAGCTACGGTTTCAAGTTTAAAGGGGGTTTCATTGATGACGATGGAAATGCTGAGCTTCAATGGGATAACATGGCATTTTCTCATGTCGATATTGCCATTCACACTTACCACGAAGGTGCTGTTGATGAATGGAAGAGCTCTCAACCTGAAAGGCATCTTCTAAGAAAGGCACTTAAGTCTGCATTGTTTGGATTGAAAGCAGACCATGCAGAAGACTTTCTCAGCTGCCATGGCCAGAAGGTTCGCGAGTATGTCCCTGATCTCGCAGAATCGATAGCTGGCTTAATCTTATCATCCAATGATCAAGAGTTCCAAGATGAGTGCATCGCTCTTCTCGGCCTAGGCTCAGATCAAGATCTCACAGAAGGGGCGGTTAGATCCTGCATCGGTGAGAAGATGAACCGTATCATAGAGATGAATGACACCAAGGAGAACGTAGAGCACAACGCACCTTATCTGTTCGAGTGCGAGAGGTTCGATGAAGATTATAGCCTACTGGATGAAGACGACCCAGATGAGGATATGATTTTCGATTTCTAG</cdnaseq>

Protein Sequence

<aaseq>MASSPPPSTASPTSSSPYRKLLHSLIYWAVQRCRMSESPCRLTVSVKRSPEPAGSSPLRISVSDTGVGSKLEEFLELDALARETPVEKWDGTLLITTTGIDDKAIYRYQFNLQEDTSSSTRFTKLATMYKSRAIFRQIFVLRASNLACELFVAQTDSAGSGDVCLSQDSDDVHISITTSSIDRLVSGLKDYALSHANTSDRCEACYMNRDRLKIGTGTAKYVDKRKAKGQLVEVVIMIAPTSSDLSCWMTNCSSTQVLHFVEFIPCPISQSSLSALMSIDWQSYGFKFKGGFIDDDGNAELQWDNMAFSHVDIAIHTYHEGAVDEWKSSQPERHLLRKALKSALFGLKADHAEDFLSCHGQKVREYVPDLAESIAGLILSSNDQEFQDECIALLGLGSDQDLTEGAVRSCIGEKMNRIIEMNDTKENVEHNAPYLFECERFDEDYSLLDEDDPDEDMIFDF</aaseq>

Gene Sequence

<dnaseqindica>1..72#164..275#350..433#833..859#1556..1671#2091..2111#3089..3282#4102..4243#4488..4681#4810..4933#5805..6104#ATGGCGTCCTCCCCGCCTCCATCGACGGCGTCCCCCACCTCCTCCTCGCCCTACCGGAAGCTCCTCCACTCCGTACGCCTCGCCCTCGCCCTCATCTTCGCGTGCGATTCCGAGTCCTCTCCCCTGATGATACACTTTGTTTGGATTCCTTGTTCGGTTTCAGTTGATTTACTGGGCGGTGCAGCGCTGCCGGATGTCGGAGTCGCCGTGCCGGCTCACGGTCTCCGTCAAGCGCTCCCCGGAACCCGCTGGTTCCTCGCCCCTGCGTATATCTGGTAGTGCAGCTGCGCGCTTGCGCCGTTGTGATCTGTTGCCCCTTCCTTCCGCTTACATTCGTGAACTACTGCAGTTTCAGATACTGGAGTTGGGAGCAAGCTGGAGGAGTTCCTGGAGCTAGATGCATTGGCGCGTGAGACCCCCGTGGAGAAATGGGGTATGCGATCACCTTCTCTCGCTCAATTTCCCTGTTTGCTGGTTGTCAGTAGCATCCTCAGACTGCGGATTGCATGAGATGTGTGGTTCTGTTGTTAACAACACCGCTGAATCATCTGGGAAGTTGGTTTGTACGGTATAGCCTGTTAGGTACGGAGTAGATATGGAGTTCACCAAGTCATCAGAATTTGCTTAAGATATATTATCACTACATTTGATATGTTCATATGTAGAATTGTAGATGGTCTTGATGGGAAGATGGATATATGTTTTTCCCTGACATTCTCTTGGGCAACAACCATGTACCTGACACTGTGCCATGTATCTTCATTTGGTTTAGAGTTTGTCATAACTCTTGGTTCATCATTCATTGTCTCACACTAATTCTTTCCATCTGCAGATGGTACCCTCTTAATCACAACTACAGGTATGCTTCGTATCTAATCTATGTGTTACATGGTTCCACTGCTCCATTTGTGCCATACTGACATAAACCATTTCATCTTGTCTATTTAATACTTTCACCTTATTCTAAAACATATGTTTAAGTTATCATGTGTTGTCCATTGTTCTCCATGGTCCCATGCTGCTAGTGCTCATTTTATTATCTCTTTTTGGAGTGGAAATCCCACAAAGCCTGAGAATTTTCCCATAAGAGCTGCAAAAGTTGATAGCATTGTGGGCATACTTAAATCGGTCGAACCACAGTAGTATGCCATGAAATTCGCTGTTTCACTTTGCTAAAACTTATATTTGAATCTTGCTGTCTCCTTGGTTCCTTTTTGTTCCTTTTTTGCATATAATGTAGTTCTGTACATTCTGTCTAATTTATTCAAAATGGCTTTATTGGATAAAAAGGAATTCTAAAGTCAAAGGAAATGTTAAATATTTATGTTGCGTATACTTATCTTGTTATGTTTCTTCAGATATTTTCCAGAAATTCTGTGTGTATGTTTATTCTGTTTTGAATACATGTTATGACACCTGTGGATCCCTCCACAAATTAGCATTTGCCATGCAAATACATAAATATATATGTTGTAAACTATTGTTTTATTATCTTAATTCTATGTGTTTATTCAATGCTATTGAACTTTTTATTGCATACTTTTCCAATCTGTAGGAATCGATGACAAAGCTATTTATCGTTATCAATTTAATCTTCAAGAAGACACATCTTCAAGCACAAGATTTACCAAGCTAGCGACCATGTACAAAAGTCGTGCTATATTCAGGCAGGTCCTCTTGTGTTACTTTGATGTGACCTATGGAAATCTGGTGTTTGTTGAATCGTTTATGCCTTTTTCAACACAGTGGAACTGAAGTATGCCTTTGCCTGCCAACTGAAGCTGATGTTGATGACTTAATATTATGGTTGGTTGGTTTTGTCCGCAAGGTTGTATTAAGGAACATTCATATTTTTTAAATGTTTTTTCACCATAATTTTACCTGCCCAACCTTAGCAACATTAGTGATCGTTGTAATTTGTTATCCTGTCAATAATAGAATCCTCATAACAATCCTATATTACAGACTTACTATAGTCATTTGTTTCCAAATATGATAGAATTAGTAACATTATGTTGCTAACCATTTCTTTTTGCGCGATTGTCCCGAATACTTTCTAACTAGCATGTTTCTGTTGTTGACCTTTGCAGATATTCGTGCTAAGAGCATCTGTAAGTATTTCTGAACTTTTTTCTCTAGTTGTAACCAGTGTGTTCTTCCTATTTTCTTTGTTCACTATGTTTTTTTTTCCATATTTCATAATGACTGATCATATTTATACTCACCATTAATCCCTTTAATCCTGAGTCCTTAATCCTCAAGTCAAAATGCCAAATGCTATTCGTCCATACTGACCATACACACTGGTGCTATTGTGTGTCTATCTCTTAGCAGCGGGTGATGCTGTTCTCTGAGGATGTGTTTTTCTTGTTAGAATAACTGTGTCATTTACAAAGCCTTCTAGCTTATCCCGTATCATGTGTGGCGTACTGCTCTAACAACAGTACATTATCCCGTATCATGTGTGGCGTACTGCTCTAACAACAGTACATTTCATGCCACTTATATCATCTAAATCGAATGTGCAGATTGCATTATGTGAATACTTTTTCACACACTGCAGGACATGTTTGATGTATTTCTATATGTGTTCCCGTTTTATATGGAGGCTCATACCTTTGTGCATGATGTGCAAAATGAAATACATGTTCCTGTATTTATTTATTTACTTCTGAAAATTCACAAATACAAAAGTAACAAAACACGGTGTTCATTGGTCTATGCTACAGGGCAAAACAACTGAAAACCCTAATATTGGAGTTTCCTACAGATGCATTTGTTTGATAAGTTCTTAACAGCCATCTGATATCATATCACCAATTTGTCTGCCTGCATTTTCAGACCAACAATATTGTGTATCCTGAGATGTAATTAAAGGATATAAAACTGATGATCATGATTCATCCTCAGTACTTGGTTACATTCCATTCCTCCGAACATGTCTAATTTTACTTTGTGTTTGCATATGTCCAGTTTTAGTTGTTGCACAGTAAACAGGCCTAGAATTAGAAGCATCTATCTGCTTTTACTCTGTTTTTTCTTATTGTGACCTCTTAAATGGTTGTTTGATTTCTTTTGTACTACTCAGAATTTAGCATGTGAGCTCTTTGTTGCGCAAACAGACAGTGCTGGATCAGGAGACGTTTGTCTGTCACAAGATTCTGATGATGTCCATATTTCCATTACCACATCAAGTATTGACCGTCTAGTTTCTGGCCTTAAAGATTATGCACTCTCACATGCTAACACATCTGACAGGTGTGAAGCATGCTACATGAACAGGTAAACATTGCTTGCTGAGTTTAACTCTAGACATATTTGTTTATTTCTTTACTTTGCTATTGGAAATAGATTTATGATGTGTGTTATCTTTTGGATTTTGACTTTCCGTGGAAGCTTATCATTAGCAATTTAGCATCCATATTTAATCATTTTTCTGGAACTTGCACTTGAATCGCTAAACAACAGGTTTGAAGTTAATTTACGGGTGTTTTAGACTTTGTGTCACATAGGAAAAGTTGTCGCTCATGAAGCGGTAAATAAAATAATTGCAGTCACTGATTCTGAACGTAGTTATGAAAACTCACTTGTGCACACACGAAGGCTGGGGGAATAAGTCTTATCCCATCACATCTAATAAAATCTGAAATGTATTAATCAAATATGCACAATTGAGTGTATCAACATTATTTAATGTGAAGATATCAGATCCTGCCGCATCCGCATTTGAGCTCTAGAATTGTATATATCAAGGCCTAATAGCTTTCTTTTGTTAAACAAAGTACCGATCTATCAGATGAACTGCTTCAGGTGGCCAACAGTGTCTGGTGCTATTCGCTAGATTTGAGTAATGTCTAATTGCCCCATTTTCCCATCACCCAAAGTCCCAAACCCATTCAGCATTTCAGTTCAACCTTTTTAGGCATGCTTGTGTATCCTACCTTTCGGTAGCCTGGTATGTAGTAGTTGAATTCAGTCATGTGCATACTAATGAATACCATATGTGTATCATCTATCTCTGCAATTGTACATTCCTCAAATAGCTTTGATTACATAGTTGATAGGGCTTGTATGTTTTGCTCTTCTGCCTTCTCACTTCAGAGATCGCCTGAAGATTGGAACTGGAACAGCAAAATATGTAGACAAAAGAAAAGCTAAAGGGCAACTTGTTGAAGTAGTGATAATGATTGCACCTACTTCATCTGATTTGAGCTGTTGGATGACAAATTGTTCATCTACACAGGTTTGCACCATAGGCCTCTAAGTTACATAAACTAATTATGCAATTACATTAGCATACTTGTTCTTGTGATGTCTAACTGGTTATGGGTGTAGTATACAAGCAAGAGGGCCTCTTGTGTGGTATATTCTTGCTTGTATTTAGTAAGCTTATAAAAGTTATAACAGCATGGCGTCCAATGTTTATGCTGAAGGTGTGGTTCAAGTATGCTCACTGCTTCCACTCAATGGTGAATTGTCTATTGTAGGTTTTGCATTTTGTAGAGTTCATACCATGTCCAATCTCACAATCCTCCCTCAGTGCGCTGATGAGCATAGACTGGCAAAGCTACGGTTTCAAGTTTAAAGGGGGTTTCATTGATGACGATGGAAATGCTGAGCTTCAATGGGATAACATGGCATTTTCTCATGTCGATATTGCCATTCACACTTACCACGAAGGATATCCAGCTTTTGTTTTGTGCATGCTTTCTTTTTTCTAGTGATGGTGTCGCCTGTCTATTTGGCTGTGGATATCTCTGTTGGATTTCCCATCACTGTATTTGGCTATCCTTGACCTGCTGTAGCTACTGCTGTTGATGAATGGAAGAGCTCTCAACCTGAAAGGCATCTTCTAAGAAAGGCACTTAAGTCTGCATTGTTTGGATTGAAAGCAGACCATGCAGAAGACTTTCTCAGCTGCCATGGCCAGAAGGTTTGTGCCTTCTACACTTTGCTGTTAACCACGTAACTGGTGTGTTTGTTATTTCCATTCCTTACTTGTATGTATTTTCTGCCTGTTATAATTTATAACTCAAGAAAAACTATTGTTAGACATAAGGTAGTACTGAACCGACACCTGTTAGATTTAGTGCAACCTCAATGCAACACTTCTTAATCTGTGCCACCTGCCAACCTCGCAAAGTGACCACTTTCTGTATAGTTGCTCTTTTGGTCACACAAATTAGATTGACGTCATAATAAGCTTCATATTATAATTTCTGTAACTTATCATCAGAAATAATCACTCTGTTGGTTCCTACCTCAATGTGAATATCATCTTCACTTTCCTTGATACTTCTTTCCCTTGAAATATCAAGTGTGTGTCGGCTTTATACTACGAGGGGAAAACTGTATAGGGAAGAACTGGTGTGCCTACTGCCTAGTACACCCTAGCAAAATTACCACTCCCCTTAAATACCGAACAAAGACTAGACGGCAATATTGTTCAGCTTGGTAATGGGCTTTGTAAGTCTGTATGCCTTCAACTATTCTTGCTAGTTTTCATCAGGACACACATTGAATCTTAGTTTGGTGGCAAGCCACAAATGACATGGCCTAACATTTGCGTACTGTCAGTTCAATTACTACAAACTTGAAAAATGGATTAATCTGATATTCTAGAACAACTTTTATATAGAAAGTTTTCACACGAAACGCACCGTTTTACGGTTTGAAAAGCGTGCCATGAGGATCCAAAAGTTAATCCAACCTAAGGTAACTTGATGTAACTTGTTGTTGCCTACAATTTGATGTAACTTGTTATTGCCTACAATTTGATGTAACTTGTTCTTTCCATAATTCAGGTTCGCGAGTATGTCCCTGATCTCGCAGAATCGATAGCTGGCTTAATCTTATCATCCAATGATCAAGAGTTCCAAGATGAGTGCATCGCTCTTCTCGGCCTAGGCTCAGATCAAGATCTCACAGAAGGGGCGGTTAGATCCTGCATCGGTGAGAAGATGAACCGTATCATAGAGATGAATGACACCAAGGAGAACGTAGAGCACAACGCACCTTATCTGTTCGAGTGCGAGAGGTTCGATGAAGATTATAGCCTACTGGATGAAGACGACCCAGATGAGGATATGATTTTCGATTTCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA023580

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA023580&oldid=46105"