BGIOSGA023593

From RiceWiki
Revision as of 13:35, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA023593| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA023593, complete gene.| tag = OJ1663_...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA023593

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA023593, complete gene.

LocusTag

OJ1663_H12.22

Ensembl Transcript ID

BGIOSGA023593-TA

Ensembl Protein ID

BGIOSGA023593-PA

Length

4867

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:31916749..31921615

Sequence Coding Region

31916749..31917242,31918468..31918648,31918748..31918807,31919228..31919391,31919466..31919529
,31919632..31919700,31919803..31919898,31920088..31920132,31920694..31920764
,31920925..31920991,31921079..31921129,31921205..31921366,31921469..31921615

Genome Context

<gbrowseImage1> name=IndicaChromosome06:31916749..31921615 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:31916749..31921615 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTTCTCGAAACCCTAGCCCCGCCTCCCTCTCCACGCCGCTCCTCTCCGACTCCATCTCGCCCACGCCCACCACCAACGGCCACGCGGGGCACCATAACCACCACGACGACGACGAGGAGTCGCCAACGGTGTGCGGCGGCGATGGCGGAGGAGGGGGGGACCCGTTCGCGTTCCTATCGGAGGATCGGCCGGCGTGGTGGTCGCCGCGGGGGGTGTCCCCGGCCGACCCGTTCCGCAACGGGACGCCGGGGTGGTGCGGGGCGTACGAGCTCGTGAGGGCGCTCGTGTGCGCGCCGGTGGCGGCGGCGAGGCTGGTGCTGTTCGGGCTCTCCATCGCGGTGGGGTACGCCGCCACGTGGGTGGCGCTCCGCGGGTGGGTCGACGTGCGGGAGCGGGCGGCGCAGGAGGGCGCCGGGCCCATGCCGGCGTGGCGCCGCCGCCTCATGTGGATCACGCGGATCTCCGCGCGCTGCATCCTCTTCTCCTTCGGATACCATTGGATAAGGAGGAAAGGAAAACCCGCGCCTAGAGAGCTTGCACCTATAGTTGTCTCAAATCATGTATCATACATAGAACCCATATACTTCTTCTATGAGCTGTTCCCGACAATCGTTTCTTCAGACTCTCATGATTCCATACCATTTGTTGGAACAATTATCCGAGCAATGCAGGTTATATATGTTGACAGATTCTCGCCAGCTTCAAGGAAGTCTGCTGTAAATGAAATAAAGAGAAAGGCGGCTTGCAATAGCTTCCCACGTGTCTTGTTATTCCCGGAAGGCACGACAACAAATGGAAGATTTCTGATTTCTTTCCAACATGGTGCATTCATACCTGGCTACCCTGTTCAACCTGTTATTGTGCGCTATCCACATGTGCACTTTGATCAATCATGGGGAAATATATCATTAGGAAAGCTCATGTTCAAGATGTTTACCCAGTTTCACAATTTCATGGAGGTAGAGTACCTCCCTGTTGTTTACCCACCTGAGATCAAGCAAGAGAATGCCCTTCATTTTGCAGAGAACACTAGCTATGCTATGGCACATGCACTTAATGTTATTCCAACCTCTTATTCATATGGGGATTCAATGATCATGGCTCGAGCAGTGGAAGATGGAAAGGTGAACTGCTCAAATTATATGGTGGAGATGGCTTGGGTAAAAGAAACATATGGTGTGAGCACATCAGAAGCAATGGCACTCTTGGAAGACTTTTTGTGTATGAGCCCAGACAAGGACGGACGTGTGAATGCGCAAGATTTTTGGGCTCATTTTGGCCTTAATTGCACCCCTCTTTGCAAGAAGATATTTCAGTACTTCGATTTTGAAGCCAAGGAATCCATCACATTCCGTCAGTTCTTGATTGGATGTGCGCACCTCAGGAAGCAGCCATCGTTTCAGGACGCCTGCGAAACCGCGTTTGAGAGGTGTAGGAATCCCCTAACATCTCACATCGGCAGGGAGCAGCTCGCCGATGTCCTGCGGTCAAGCATGCTTGAGCTGATGACCGATAATGGGATGATGAAGCTGTTCAAGACGTTGGACGTCGACGATGACGACGGAATCAGCAAGGATGACCTGATGGCATCCCTTAGGAAGCTCCCCTTCATGATCGCGCTCTTCGCGCGCCGGATCAACGGGGAAGTCTACATCGAGATAGTTTGA</cdnaseq>

Protein Sequence

<aaseq>MASRNPSPASLSTPLLSDSISPTPTTNGHAGHHNHHDDDEESPTVCGGDGGGGGDPFAFLSEDRPAWWSPRGVSPADPFRNGTPGWCGAYELVRALVCAPVAAARLVLFGLSIAVGYAATWVALRGWVDVRERAAQEGAGPMPAWRRRLMWITRISARCILFSFGYHWIRRKGKPAPRELAPIVVSNHVSYIEPIYFFYELFPTIVSSDSHDSIPFVGTIIRAMQVIYVDRFSPASRKSAVNEIKRKAACNSFPRVLLFPEGTTTNGRFLISFQHGAFIPGYPVQPVIVRYPHVHFDQSWGNISLGKLMFKMFTQFHNFMEVEYLPVVYPPEIKQENALHFAENTSYAMAHALNVIPTSYSYGDSMIMARAVEDGKVNCSNYMVEMAWVKETYGVSTSEAMALLEDFLCMSPDKDGRVNAQDFWAHFGLNCTPLCKKIFQYFDFEAKESITFRQFLIGCAHLRKQPSFQDACETAFERCRNPLTSHIGREQLADVLRSSMLELMTDNGMMKLFKTLDVDDDDGISKDDLMASLRKLPFMIALFARRINGEVYIEIV</aaseq>

Gene Sequence

<dnaseqindica>1..494#1720..1900#2000..2059#2480..2643#2718..2781#2884..2952#3055..3150#3340..3384#3946..4016#4177..4243#4331..4381#4457..4618#4721..4867#ATGGCTTCTCGAAACCCTAGCCCCGCCTCCCTCTCCACGCCGCTCCTCTCCGACTCCATCTCGCCCACGCCCACCACCAACGGCCACGCGGGGCACCATAACCACCACGACGACGACGAGGAGTCGCCAACGGTGTGCGGCGGCGATGGCGGAGGAGGGGGGGACCCGTTCGCGTTCCTATCGGAGGATCGGCCGGCGTGGTGGTCGCCGCGGGGGGTGTCCCCGGCCGACCCGTTCCGCAACGGGACGCCGGGGTGGTGCGGGGCGTACGAGCTCGTGAGGGCGCTCGTGTGCGCGCCGGTGGCGGCGGCGAGGCTGGTGCTGTTCGGGCTCTCCATCGCGGTGGGGTACGCCGCCACGTGGGTGGCGCTCCGCGGGTGGGTCGACGTGCGGGAGCGGGCGGCGCAGGAGGGCGCCGGGCCCATGCCGGCGTGGCGCCGCCGCCTCATGTGGATCACGCGGATCTCCGCGCGCTGCATCCTCTTCTCCTTCGGGTGAGTTCTAGTTTCCGCTGTTCGTCGCTCGGATTAGCATCCCTCTCACCAAACGCGCACTCAGAATCGAGTCTGGATCGATGACAGATCAGAAATTAGAACAAAAAAACTTTAATCCGATCTGCATCGGATGATGGATTAGCCGCTGTTAAGTTTATAGAATGAAATTGAGGTGATTAGATTCGGGTGGTGAGACGAAGCACTCGAAATCTGTGGATGGATTGATTCGGTGGCGCGATTGGTTTCGCGGAATTTTGGGGTTTGGTGATTTTTGGGGCACGTGTGTGTGGGCGTGGCTTTGCTGCAATCATTTGTTAGGTGGGCGCAACGTAGCGTATGGAAGGTGAAGTGAAGGGTCCGTGTGTGAGATATGTTGTTTGTTTCGTTTTCTCTGCACTAATTGCGGCTGGGAAGAGACCGACAACGAGGGGAGGGTACCACGGTGGTTCAGAAGAGGTTAGAGACTGATCTCTGCACGGCGCCTTTGGTTAGCTTCACTACAATTGTGGATCGAAACGAGATGGACTAGCGATGAATGATGATGCCTTGTCTACTAGGTGGTTTGGGAAGATAGTGAGAAAGAGTAAGAAAGCCTTCCTGAAAGTATTCTGAAAATTGTTGGCCTTTGGCGCTGATAATTAATTAAGTTGAGGCACTAATCAGGTGGGCTGTTGTGTGGTTGGATCGAAAATGTGGCTGCTACTTAGTTCAAATTGGATTGCTGTTCACCTGGGAATTGCTCAATTGGACACTCTGCACACAAATTTTGAGACGTTTGAAGTTTCAATTGTTGTGAAAAGAATGGTGAAAACTGCGAGCGAATGTTGAGTGGTCAATGCTGAGAAAGCACACACATAGCTTATCATCTCTGCCAATAGTTCTTCTATGCAGTAAAATGAGAACTTGAGAAGGGAACTGCCCAGTGTTGGTGGTCGTGTTCTGTAAGCAGTTGCAGAAATGAACGTTTTGTTCAAACTTCAGGGGACGAAGACCACTTGGATGTGGATTTTGTTTTATACTAAAGTTTTCCTTTGGGCCATGATCTGGAGTTTTGGTTTTTAATCTCACATATGGATTTATAATGGGAAATTTTGAAACAACTCACTTTTGCTCCTTGTCTATGCTGGGATATCCTGACTGAGTGCCTACTGTTTGTCATTTTTTCTTCTTGCAATACAACTGTTTACTGTCTGATCTTTGCTAACCACTTGTTTTCTACTGTCAGATACCATTGGATAAGGAGGAAAGGAAAACCCGCGCCTAGAGAGCTTGCACCTATAGTTGTCTCAAATCATGTATCATACATAGAACCCATATACTTCTTCTATGAGCTGTTCCCGACAATCGTTTCTTCAGACTCTCATGATTCCATACCATTTGTTGGAACAATTATCCGAGCAATGCAGGTATATCCATTATGTTTTAAAAGCCCTTTTTCCCAGTTACTTTCTTTGACACTATTTTGCAAGTTACTTTCAAGTTTCAAATTTACAACAAATGCATAGGTTATATATGTTGACAGATTCTCGCCAGCTTCAAGGAAGTCTGCTGTAAATGAAATAAAGGTTAGAATGATTCCTCTTGACCCCACTGTTGCTCTGCATACTTTTAATTAACTGCATTAAATTACATGTGCTTTTTCCTTAATAAAGTGATGGTCTCATGGTGTCAGGCATCTTTTAATTGGTGATATGCAAGTTATCCTGTTGCTTTCTGTTGCCTATAGCTGTTAGGCTGTCAAATTATCATTACTGCACACAGTGGACTTCTGGGGTAGAAAGAATAATAGGCAGAAAAGAACAAAGACAAACTTGTGCTTGCAGCCACCATTTCTGTAGCTTCCTCTTTCATCTACAATATGCAAATACACCACAGTTGATTTCAGGAAGCAATGCCATGCAACTCATCCTAGAATAGTGCAAAGCATGATTTTCTGTTTTGTTATCTTGTTCATATGGTACATACTCTCTAGGATGTGATTTCAGAGAAAGGCGGCTTGCAATAGCTTCCCACGTGTCTTGTTATTCCCGGAAGGCACGACAACAAATGGAAGATTTCTGATTTCTTTCCAACATGGTGCATTCATACCTGGCTACCCTGTTCAACCTGTTATTGTGCGCTATCCACATGTGCACTTTGATCAATCATGGTAAGTTATCTGTACAGAAATAAATCCTTATTTGTTGCCTCAATGCTTTATTTATGTTCATTTTGCTGCTTCAGGGGAAATATATCATTAGGAAAGCTCATGTTCAAGATGTTTACCCAGTTTCACAATTTCATGGAGGTGCACACTCTCATTCCATTCAGCCTAGAATGTAAAATCTTCATGTCTTTGGTAATAACTACTTACACAATAAGGTCCTTACATGAACCATACTTTTTACAGGTAGAGTACCTCCCTGTTGTTTACCCACCTGAGATCAAGCAAGAGAATGCCCTTCATTTTGCAGAGAACGTAATCCTTCTTGACTCAAAATAATTACATATTTGGCATATTTTTGCGTTCCATACCAATGTAATGGACAAAGTACTTTATTACAACTATTGAATTTTGCAGACTAGCTATGCTATGGCACATGCACTTAATGTTATTCCAACCTCTTATTCATATGGGGATTCAATGATCATGGCTCGAGCAGTGGAAGATGGAAAGGTAAAAAGGGCAATGTCGTAGTGTGATCTTCATGCTGAATTCATGTCCATTGTTTTGACTGTGTTTGCTGGATTCCATATAATGGAACGTTGCATAGTGCATAGATATATATTAACAAATAGCTGCCATTAGGCTGTCTTCCATCATCTATGAATTTGATCTCTAATAGGCTGGGTTTAACATTTGCAGGTGAACTGCTCAAATTATATGGTGGAGATGGCTTGGGTAAAAGAAGTAAGTCTTCCACATTCGCACTGTTGGTATATGCATATCAATATGGGACCTGGTCTACAGATATACTCCCTCCGTCCCTAAATATTTGACGCCGTTGACTTTTTTAAACGTGTTTGACCGTTCGTCTTATTCAAAAACTTTTGTGAAATATGTAAAACTATATGTATACATAAAAGTATATTTAACAATGAATCAAATGATAGGAAAAGAATTAATAATTACTTAAATTTTTTGAATAAGACAAATGTTCATATATTTTTAAAAAAGTCAACGGCGTCAAACATTTAGGGATGGAGGGAGTACATAGAAGAAATAACATGAGACCTTGAAATTGTATTGTTGTTGAAGAAAATGTTGTAGTAGGACTTGGTTTGTGCATGATTTATATGCGAACTATTTAGAGGTGTCCCACCCACTATATAGATAAAGCATAATCATAGCCGTGTTACTGTGTTTTTTTCTTTTGCCATGCATGGTTTTCTTTTGCTCATTGGTGCTTTTGAGGCATTATAGTTGCTGCTCCATCAATTATGGTACCTGATGTTTTTTGTTCTTTTTCAGACATATGGTGTGAGCACATCAGAAGCAATGGCACTCTTGGAAGACTTTTTGTGTATGAGCCCAGACAAGGAGTAAGTTTTCTCATCCTCACACTGACAAATATGTGCTTTATGGCAGAGCACATAATTTGGTCGTGAAGTCTAAAAAGATGTCCTCCATTTCCTAAAAGCTGTTATCATGATTTCACAGAATCATGACAAATGACATTACTTAACTGGTTAACCCTTGCAGCGGACGTGTGAATGCGCAAGATTTTTGGGCTCATTTTGGCCTTAATTGCACCCCTCTTTGCAAGAAGGTACTGGCATTCTCCTCGCGTAAATACTGCCAACCTTAATTGGAGTTACAGTACACCCTTCGCTGAACTTGTGCATCTGTTTTTCAGATATTTCAGTACTTCGATTTTGAAGCCAAGGAATCCATCACATTCCGTCAGGTATCAACTTGAATACAATCAACATAATAACTGATGCCTTGCGCTTACTAACATTCAAGGACGTGATGTATGCAGTTCTTGATTGGATGTGCGCACCTCAGGAAGCAGCCATCGTTTCAGGACGCCTGCGAAACCGCGTTTGAGAGGTGTAGGAATCCCCTAACATCTCACATCGGCAGGGAGCAGCTCGCCGATGTCCTGCGGTCAAGCATGCTTGAGCTGATGACCGATAATGGGGTAAGTCGCCAGTTTGCTTCATGCAACATATCTAATCACCTATCTTCCAACGCCATCACCCAGTTTCGACTCATCTGTCATTGCCTACCGTTTACATTACAGATGATGAAGCTGTTCAAGACGTTGGACGTCGACGATGACGACGGAATCAGCAAGGATGACCTGATGGCATCCCTTAGGAAGCTCCCCTTCATGATCGCGCTCTTCGCGCGCCGGATCAACGGGGAAGTCTACATCGAGATAGTTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA023593

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA023593&oldid=46118"