BGIOSGA023610

From RiceWiki
Revision as of 13:35, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA023610| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA023610, complete gene.| tag = P0535F0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA023610

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA023610, complete gene.

LocusTag

P0535F09.24

Ensembl Transcript ID

BGIOSGA023610-TA

Ensembl Protein ID

BGIOSGA023610-PA

Length

2520

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:32185205..32187724

Sequence Coding Region

32185205..32186651,32187696..32187724

Genome Context

<gbrowseImage1> name=IndicaChromosome06:32185205..32187724 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:32185205..32187724 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCGGCGCCGGCGCCGGTGAAGGCGGCACCGTCCTGGTGGGCGTCCGAGGCTACGACAGCGGCCACCGCGAGAAGGAGGGAGGCAGCACGGCCACCTCCAGAACAAGCAACGGGCGTCCCATCGAGATGACATTCTGGAACGAGGCCCCTCCCGCGCTCTCCCACTTCTCCGCCCACGGCTTCGATCTGCCGCCCGCCGCCCATGGCGATCTGCTCCTGGCGCCCAAAGTCATCGCCGCCGCCTACGGCTTGCTCCTCCTCAGAGTCCCCGTCAACCCCGTGCCCGGCGGCAAGAGTCTCTTCCGTCAGGACGACTACTTCGTCTACCATCACCATCAACCCGCCAGGCTAGATCTGCTCCCCAGGCCGTGCCAGCAATATTGCTTACGCGACGACGATTTCGCCATCGTTAGCATCTGCGGCGACAAGCAGCAGTACGTCGTTGCCGCCCTCGAGATGATCAACCTGCCCAGTCAATTCGCGCTGCACCGGTACAAATCTTCTTCTGGTGGTGGCGATGGTGATGAGATCGCCGGAAATTGGACGTGCGAGGAGGTGTTTGTGGAGGAGGCGGTGAGGGACAGGGTGTGCCCGATCCCTGACTCAGCTGAGAGGCCCGTGTACCACATCACCACCAAGACCATCGCGCTCGGAGGCGCGAAGGGCACCGTCGGCTGGGTCGATCTCTGGCGTGGCATCCTCCTCTGCGACCTGCTCGACGAAATGTCTCCCCCAAAGCTCCGCGACATGCCGCTGCCATGGCCGGCCAAGGGCAACTGGACAAGATACCTCAGTGACAGCGAGTCCTTCTATCGGGACATCACCGTCAGCCAACACAAGGACTTCATCAAGTACGTCGAGATGGAAATCACCATGCCAAGAGTTGTGACCAAAACCATAATATCCTCCGGTGATCGCACCATGCCTGCAGATGATCCTCCTGATTCGTTCCTCGAATGGGTTCGCCGGAGCAGAGAACCTCAGCCTCAGCCGACGACACGGCAGCGCTCCTCCGTCCGGCGGCCTGGCCAGTGGCTCACTACATGGACCATGCCTATCCCGGTCACTTCATGGGAGGACTGGCGCCCTGACTGCACAGCTAACTTGCATGATTTCCATGTCGTCGACAACACAGCCCATCATGGGTTGCTGAATAAGCTCATGCTCAGCACCAGCGATGATGAGGAAGCCAAAGGGTCCAGCTTGTCCCTAGGATGCCTGGCTATGTCTTACCCCGCCTTGAGCATCGACGACGACGATGTTGTTTACCTCTTGTGCAATTCTGCCAACAGGGATTGTGATATGGGAGGAGTGATGATCGCCCTTGATGTCAGGAAGAAGGAGATTCAAGGAGCGGCCAAGCTTGACGGAAAAAAGAACACCCTCTTCTCCATGCGATGCTATCTCGCAACTGCCATCTCCAAACATCCCACTCCTACTGCAGATACAAGAGTTGGACAACCTAAGGAGTAG</cdnaseq>

Protein Sequence

<aaseq>MAGAGAGEGGTVLVGVRGYDSGHREKEGGSTATSRTSNGRPIEMTFWNEAPPALSHFSAHGFDLPPAAHGDLLLAPKVIAAAYGLLLLRVPVNPVPGGKSLFRQDDYFVYHHHQPARLDLLPRPCQQYCLRDDDFAIVSICGDKQQYVVAALEMINLPSQFALHRYKSSSGGGDGDEIAGNWTCEEVFVEEAVRDRVCPIPDSAERPVYHITTKTIALGGAKGTVGWVDLWRGILLCDLLDEMSPPKLRDMPLPWPAKGNWTRYLSDSESFYRDITVSQHKDFIKYVEMEITMPRVVTKTIISSGDRTMPADDPPDSFLEWVRRSREPQPQPTTRQRSSVRRPGQWLTTWTMPIPVTSWEDWRPDCTANLHDFHVVDNTAHHGLLNKLMLSTSDDEEAKGSSLSLGCLAMSYPALSIDDDDVVYLLCNSANRDCDMGGVMIALDVRKKEIQGAAKLDGKKNTLFSMRCYLATAISKHPTPTADTRVGQPKE</aaseq>

Gene Sequence

<dnaseqindica>1..1447#2492..2520#ATGGCCGGCGCCGGCGCCGGTGAAGGCGGCACCGTCCTGGTGGGCGTCCGAGGCTACGACAGCGGCCACCGCGAGAAGGAGGGAGGCAGCACGGCCACCTCCAGAACAAGCAACGGGCGTCCCATCGAGATGACATTCTGGAACGAGGCCCCTCCCGCGCTCTCCCACTTCTCCGCCCACGGCTTCGATCTGCCGCCCGCCGCCCATGGCGATCTGCTCCTGGCGCCCAAAGTCATCGCCGCCGCCTACGGCTTGCTCCTCCTCAGAGTCCCCGTCAACCCCGTGCCCGGCGGCAAGAGTCTCTTCCGTCAGGACGACTACTTCGTCTACCATCACCATCAACCCGCCAGGCTAGATCTGCTCCCCAGGCCGTGCCAGCAATATTGCTTACGCGACGACGATTTCGCCATCGTTAGCATCTGCGGCGACAAGCAGCAGTACGTCGTTGCCGCCCTCGAGATGATCAACCTGCCCAGTCAATTCGCGCTGCACCGGTACAAATCTTCTTCTGGTGGTGGCGATGGTGATGAGATCGCCGGAAATTGGACGTGCGAGGAGGTGTTTGTGGAGGAGGCGGTGAGGGACAGGGTGTGCCCGATCCCTGACTCAGCTGAGAGGCCCGTGTACCACATCACCACCAAGACCATCGCGCTCGGAGGCGCGAAGGGCACCGTCGGCTGGGTCGATCTCTGGCGTGGCATCCTCCTCTGCGACCTGCTCGACGAAATGTCTCCCCCAAAGCTCCGCGACATGCCGCTGCCATGGCCGGCCAAGGGCAACTGGACAAGATACCTCAGTGACAGCGAGTCCTTCTATCGGGACATCACCGTCAGCCAACACAAGGACTTCATCAAGTACGTCGAGATGGAAATCACCATGCCAAGAGTTGTGACCAAAACCATAATATCCTCCGGTGATCGCACCATGCCTGCAGATGATCCTCCTGATTCGTTCCTCGAATGGGTTCGCCGGAGCAGAGAACCTCAGCCTCAGCCGACGACACGGCAGCGCTCCTCCGTCCGGCGGCCTGGCCAGTGGCTCACTACATGGACCATGCCTATCCCGGTCACTTCATGGGAGGACTGGCGCCCTGACTGCACAGCTAACTTGCATGATTTCCATGTCGTCGACAACACAGCCCATCATGGGTTGCTGAATAAGCTCATGCTCAGCACCAGCGATGATGAGGAAGCCAAAGGGTCCAGCTTGTCCCTAGGATGCCTGGCTATGTCTTACCCCGCCTTGAGCATCGACGACGACGATGTTGTTTACCTCTTGTGCAATTCTGCCAACAGGGATTGTGATATGGGAGGAGTGATGATCGCCCTTGATGTCAGGAAGAAGGAGATTCAAGGAGCGGCCAAGCTTGACGGAAAAAAGAACACCCTCTTCTCCATGCGATGCTATCTCGCAACTGCCATCTCCAAACATCCCACTCCTACTGCAGGTACTTAATTTACCTCTCCTTGCTATCATATGCATGTGCTCTGGTACTTGTCAATTGTATATGTTTATACTATATGACAAAGATTAATACATCGATAAAATGTTATTTGCAAGCCGGTCTCAAGTTATAGTAAGGTGGGATCATAGGGGTTTTTATTAGCTGCAGTGCTGCACTGTGATTTAACTCTTGATGATCATGATAGTGCAAAGCAACACCAAAAAAATTGAACAGTTGCAGTAATTTAATTCAGCTATTGGTTATTTTTTTAATTTCTTTAAAAAAAATATAATGTCGGTTGTTTATCCAGAGAATAGGAAGGCTGCTAATTTGCCAGTATAAAATAGACCACAATCCATAACTTTCAGTTTTGTAAAACGGCTTAAATGTATGGAAATGTTTTTTTTTTCTTGACAATTTACTAACCTATAGAGGATACATGCATCCAAGAAATGGTATTTGCAGATCCCTGACAAATTCAGCATCATGTGCATATGGGCAGTAAATTGCCATAGCTCAATCTTTGTTTAGCATGGTATGAATGATATATACGTCAATCAAACTAAGATTAGAACACAGTAACTTAGTGAACTTCGTTTAGGACGTTAAGCTTTATATGTTGATATAATACAATGCCAGAGCAGTACCAAGAGACATTACACAGTATACTGTTCCGTGTGAGTTTAAGAAAAACCCTTCGGTATCTAACCATAGTTGGAAAATGAGGCCTGAACTTTGTCAACGGAATATAGTCATCTCCACCTCTATTTCCTTATCATTAATTATGCTTCTATATATTTTGCTAGCATGTATTTAAATATAAAGTAGTAATAATCAAAGTACATTGGGACCATGCCAATTTCCAAACAAGAGAATACAACAAGTAATAAGGCATTAACCAAAGCCAACTTGAATAGTTTTATGTACTAGTATTAGCCTTAGGTTTTTGCTTTCTCTATTGTACTCATTGCGGACAACATGAATGCTCTTCCCCTTCATTGAAAAGGGTACTAACTCTTGCTTTACTGGCTACTTTATTTGATTTAGATACAAGAGTTGGACAACCTAAGGAGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA023610