BGIOSGA023617

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Revision as of 13:35, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA023617| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA023617, complete gene.| tag = P0541C0...")
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Gene Name

BGIOSGA023617

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA023617, complete gene.

LocusTag

P0541C02.19-1

Ensembl Transcript ID

BGIOSGA023617-TA

Ensembl Protein ID

BGIOSGA023617-PA

Length

2588

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:32286962..32289549

Sequence Coding Region

32286962..32287269,32287356..32287979,32288061..32288196,32288504..32288592,32288695..32288809
,32288961..32289024,32289107..32289178,32289302..32289549

Genome Context

<gbrowseImage1> name=IndicaChromosome06:32286962..32289549 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:32286962..32289549 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCCTCACTCCTCCTACCTCGCCCTCGCCCTCGCCGTTGCGGCGGTTCTTGCTATGGCCGCCGTCGAGGTGTCCGGCCTCGGCTTCGACCTCCACCACCGCTACTCCCCCATCGTCCAGCGGTGGGCGGAGGAGCGTGGCCACGCTGGCGTGTCCTGGCCTGCCGGCGCCGAGGTGATCGGCTCGCCCGAGTACTACTCCGCGCTGTCCCGACACGACCACGCCCTCTTCGCGCGACGCGGGCTCGCCCAGGGCGACGGCCTCGTCACCTTCGCCGATGGCAACATCACCCTGCGGCTCGACGGATCGCTGCACTACGCGGAGGTGGCGGTGGGCACGCCGAACACGACGTTCCTGGTGGCGCTCGACACCGGCAGCGACCTCTTCTGGGTGCCCTGCGACTGCAAGCAGTGCGCTCCCCTCGGCAACCTCACGGCGGTGGACGGCGGCGGCGGCCCGGAGCTCAGGCAGTACAGCCCGAGCAAGTCGTCGACGAGCAAGACGGTCACCTGCGCCAGCAACCTCTGCGACCAGCCCAACGCCTGCGCCACGGCCACCAGCAGCTGCCCCTACGCCGTCCGCTACGCCATGGCCAACACCTCCTCCTCCGGCGAGCTCGTCGAGGACGTGCTCTACCTCACCAGGGAGAAGGGCGCCGCCGCAGCCGCCGCCGGAGCCGCCGTGCGAACTCCCGTGGTGTTCGGGTGCGGGCAGGTGCAGACGGGCTCGTTCCTCGACGGCGCCGCCGCCGACGGCCTCATGGGTCTCGGCATGGAGAAGGTGTCCGTGCCCAGCATCCTCGCCAGCACCGGCGTCGTCAAGTCGAACAGCTTCTCCATGTGCTTCAGCAAAGACGGCCTCGGCCGGATCAACTTCGGCGACACCGGCAGCGCCGACCAGTCCGAGACGCCGTTCATCGTCAAATCCACACACTCGTACTACAACATCAGCATCACGTCGATGAGCGTCGGGGACAAGAACTTGCCGTTGGGGTTCTACGCCATTGCTGACTCCGGCACGTCCTTCACCTACCTCAACGACCCGGCCTACACGGCCTACACCACCAATTTCAACGCGCAGATCAGCGAGAGGAGGGCCAACTTCAGCGGCAGTACTCGTTCTGGTCCATTTCCTTTCGAGTACTGCTACTCGTTGAGTCCTGATCAAACAACGGTGGAACTGCCTATTGTGAGCCTGACGACCAATGGAGGAGCCGTGTTCCCGGTGACCAGCCCTGTTTACCCCATCGCGGCTCAGATGACAAACGGAGAGATTCGTATCATTGGTTACTGCCTGGCTGTCATCAAGAGCGATCTCCCCATCGACATCATTGGCCAGAACTTCATGACCGGGCTCAAGGTCGTCTTCAACCGTGAGAAATCCGTCCTGGGCTGGCAAAAGTTCGACTGTTACAAGGACGAGAAGATGACAGACGACGGGTCGAGCGTCGGGAGCCCGAGCCCATCGCCGGGGCCAACCACTCACGTCTTCCCGCAGCCGCAGGAGAGCGACTCGCCGGCGGGCAGAACGCCCATCCCCGGCGCGGCGCCGGTGCCGCGGTCGAGCAGCGCGGCAGCTGGCGGCCGTGCAGGCTTCCGGCTCCTGTCGTCCATGGCGCTCCTGCTGCTGGCTGCTGCTGCTGCAGCTGTTTTCTGA</cdnaseq>

Protein Sequence

<aaseq>MPHSSYLALALAVAAVLAMAAVEVSGLGFDLHHRYSPIVQRWAEERGHAGVSWPAGAEVIGSPEYYSALSRHDHALFARRGLAQGDGLVTFADGNITLRLDGSLHYAEVAVGTPNTTFLVALDTGSDLFWVPCDCKQCAPLGNLTAVDGGGGPELRQYSPSKSSTSKTVTCASNLCDQPNACATATSSCPYAVRYAMANTSSSGELVEDVLYLTREKGAAAAAAGAAVRTPVVFGCGQVQTGSFLDGAAADGLMGLGMEKVSVPSILASTGVVKSNSFSMCFSKDGLGRINFGDTGSADQSETPFIVKSTHSYYNISITSMSVGDKNLPLGFYAIADSGTSFTYLNDPAYTAYTTNFNAQISERRANFSGSTRSGPFPFEYCYSLSPDQTTVELPIVSLTTNGGAVFPVTSPVYPIAAQMTNGEIRIIGYCLAVIKSDLPIDIIGQNFMTGLKVVFNREKSVLGWQKFDCYKDEKMTDDGSSVGSPSPSPGPTTHVFPQPQESDSPAGRTPIPGAAPVPRSSSAAAGGRAGFRLLSSMALLLLAAAAAAVF</aaseq>

Gene Sequence

<dnaseqindica>1..308#395..1018#1100..1235#1543..1631#1734..1848#2000..2063#2146..2217#2341..2588#ATGCCTCACTCCTCCTACCTCGCCCTCGCCCTCGCCGTTGCGGCGGTTCTTGCTATGGCCGCCGTCGAGGTGTCCGGCCTCGGCTTCGACCTCCACCACCGCTACTCCCCCATCGTCCAGCGGTGGGCGGAGGAGCGTGGCCACGCTGGCGTGTCCTGGCCTGCCGGCGCCGAGGTGATCGGCTCGCCCGAGTACTACTCCGCGCTGTCCCGACACGACCACGCCCTCTTCGCGCGACGCGGGCTCGCCCAGGGCGACGGCCTCGTCACCTTCGCCGATGGCAACATCACCCTGCGGCTCGACGGATCGTACGGACACCTTCTCGCCGCCGCGCGCCCCCCTGCTCTTGCTCCCTCCTGCGCGCCGGCGAGTTGACCTGATCGAGTTTTTGCAGGCTGCACTACGCGGAGGTGGCGGTGGGCACGCCGAACACGACGTTCCTGGTGGCGCTCGACACCGGCAGCGACCTCTTCTGGGTGCCCTGCGACTGCAAGCAGTGCGCTCCCCTCGGCAACCTCACGGCGGTGGACGGCGGCGGCGGCCCGGAGCTCAGGCAGTACAGCCCGAGCAAGTCGTCGACGAGCAAGACGGTCACCTGCGCCAGCAACCTCTGCGACCAGCCCAACGCCTGCGCCACGGCCACCAGCAGCTGCCCCTACGCCGTCCGCTACGCCATGGCCAACACCTCCTCCTCCGGCGAGCTCGTCGAGGACGTGCTCTACCTCACCAGGGAGAAGGGCGCCGCCGCAGCCGCCGCCGGAGCCGCCGTGCGAACTCCCGTGGTGTTCGGGTGCGGGCAGGTGCAGACGGGCTCGTTCCTCGACGGCGCCGCCGCCGACGGCCTCATGGGTCTCGGCATGGAGAAGGTGTCCGTGCCCAGCATCCTCGCCAGCACCGGCGTCGTCAAGTCGAACAGCTTCTCCATGTGCTTCAGCAAAGACGGCCTCGGCCGGATCAACTTCGGCGACACCGGCAGCGCCGACCAGTCCGAGACGCCGTTCATCGTCAAATCCACACAGTAATTAAGCAAGCTTAACCTGTTCATGATTTGATCGAGCTGCGACAATTAACTGAATTACTACTGAATTTGTTGCTGCAGCTCGTACTACAACATCAGCATCACGTCGATGAGCGTCGGGGACAAGAACTTGCCGTTGGGGTTCTACGCCATTGCTGACTCCGGCACGTCCTTCACCTACCTCAACGACCCGGCCTACACGGCCTACACCACCAATGTATAGTACTAACTTGTCCTACATGTTCACTGACAGTTTTCTTATAGCCACTTAATGGATCATGTCTCTGAAACTCTGATGTGAGCTAGATATTGATTATACTTAAGACTTAAGAAAGCCCAAGTTGGCGACTGGCTTTCTTTAGTTTTTGTAGACCAAGTCAGATTAATCGGGTGGAGTACTATATAGAATGGTCCTGAAGAGTTGATCAAAAATGCAATTACAAAAAGAATGCAATGAACAGAGTGTACAAAGTTAAATGAGGTCAACTTGCTCATCATTTCTGTTTATTCATTCTGTATCGCAGTTCAACGCGCAGATCAGCGAGAGGAGGGCCAACTTCAGCGGCAGTACTCGTTCTGGTCCATTTCCTTTCGAGTACTGCTACTCGTTGAGGTAACAATTCTGCATCTAAGCCTCTACAAATTTAAGTTGCAAGATTGTTTCATCTCGCAAGTCGCAGCACAAATCGTTCTGATGGTGTTTGGGAAAATGCAGTCCTGATCAAACAACGGTGGAACTGCCTATTGTGAGCCTGACGACCAATGGAGGAGCCGTGTTCCCGGTGACCAGCCCTGTTTACCCCATCGCGGCTCAGATGACAAACGGAGAGGTAAATTACAGAAAAGATCACCATGTAGTCAGTAGTCATGGAACAAGAAGCACCAATTGCATCGCCATCTCTGAATCTCTCTGACATTTAGTACTAGTTGAAGTTGATTATTCAACTAATCGAATGTGATTCTTCTTACCGTGACAAGCAGATTCGTATCATTGGTTACTGCCTGGCTGTCATCAAGAGCGATCTCCCCATCGACATCATTGGCCGTACGTTGTTAACTGTGTTTTTCTGCTTGCTGCACGCACTGTTTCAGTCTTCAGTTAATAATGCTGAATGTGTTGCGTGCAGAGAACTTCATGACCGGGCTCAAGGTCGTCTTCAACCGTGAGAAATCCGTCCTGGGCTGGCAAAAGTTCGACTGTAAGTTACCTCATTCATCTCGATCCCCTGCAGCTAGCAAGAATTAACGATGACATTTTTTCTTTCTGCATCTGATCGATCACTGGCTCACTGCTGCGAATGACTGAAATTGAATTTGTTCAGGTTACAAGGACGAGAAGATGACAGACGACGGGTCGAGCGTCGGGAGCCCGAGCCCATCGCCGGGGCCAACCACTCACGTCTTCCCGCAGCCGCAGGAGAGCGACTCGCCGGCGGGCAGAACGCCCATCCCCGGCGCGGCGCCGGTGCCGCGGTCGAGCAGCGCGGCAGCTGGCGGCCGTGCAGGCTTCCGGCTCCTGTCGTCCATGGCGCTCCTGCTGCTGGCTGCTGCTGCTGCAGCTGTTTTCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA023617