BGIOSGA017440

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Revision as of 02:18, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA017440| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA017440, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA017440

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA017440, complete gene.

LocusTag

OSJNBA0030I14.10

Ensembl Transcript ID

BGIOSGA017440-TA

Ensembl Protein ID

BGIOSGA017440-PA

Length

2995

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:30975692..30978686

Sequence Coding Region

30977961..30978686,30975995..30976108,30975692..30975847

Genome Context

<gbrowseImage1> name=IndicaChromosome05:30975692..30978686 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:30975692..30978686 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCGCATCTGCAGGTCCAGGCGTCGTGGTGGTGGCGCTGGTGGTGGTGGTGTACCTCATCTTGTTGATCCGGCCGGCTGCGTCATTTCGCGTCAACGTCGGCGTGGGTATCGGCGGCGGCATCGGCATCGGCAACCAGAATCAGAACCAGGACCAGAACCAGAACCAGAATCAGAAGCCGTACTATGATGATAGCAATAACAACAACAATTACGATGAGGGCGAGGGGGAGGGCGGCGATGATCAGGAGGAGGGTCCGGAGGCGGCGGCGCCGGTGGGGCCGGGGCAGTCGTTCACCGGCGGGCGCGGGACGTACAAGTACATGGCGCACGAGTTCCTGGATGCTCACAACAAGGTGCGCGCCCAGTACGGGCTGCAGCCGCTGAAGTGGAGCAACAAGCTGGCCAGGTACGCGCGGCGGTGGTCGGCGGCGAGGCGGTTCGACTGCGTGATGATGCACTCGCCGGAGTCGCCGTACGGGGAGAACGTGTTCTGGGGGACCGGGTGGGGCTGGCGCGCCACGGACGCCGTCAAGAGCTGGGCCGGCGAGTCCTCCGTCTACGACTGGCGCGGGCAGAGCTGCAACCCGGGACAGATGTGCGGACACTTCACCCAGATCGTCTGGAACGACACCAAGCTCGTCGGCTGCGGCCGCTCCGAGTGCGTCGCCGGCGGCGTCTTCATCACCTGCTCCTACGACCCGCCGGGCAACTGGAAGGGAGAGAAGTCATGCTGCTGCTGCTGCTACTGGAGGATTGGACGCCTATATTCAGCTGGATCAGTTGCTACTGTCCGGCGATCCATACCCGTAGGGGTTCTTGCTCGCCCAATTCCACAGTTCCTTCTCAGCTTTGGCAGTTTGAGCGTAAACGATCTCGGCATCTCCAGGCCTTCGTCCAGCAAATACAAGCGGGATTTTCTGTTCAAGTTGGCATTATTATTGTTAGGACGACATCATATGATCAACAAAAGCAAAGGACAAGTTGGGAATTAA</cdnaseq>

Protein Sequence

<aaseq>MAASAGPGVVVVALVVVVYLILLIRPAASFRVNVGVGIGGGIGIGNQNQNQDQNQNQNQKPYYDDSNNNNNYDEGEGEGGDDQEEGPEAAAPVGPGQSFTGGRGTYKYMAHEFLDAHNKVRAQYGLQPLKWSNKLARYARRWSAARRFDCVMMHSPESPYGENVFWGTGWGWRATDAVKSWAGESSVYDWRGQSCNPGQMCGHFTQIVWNDTKLVGCGRSECVAGGVFITCSYDPPGNWKGEKSCCCCCYWRIGRLYSAGSVATVRRSIPVGVLARPIPQFLLSFGSLSVNDLGISRPSSSKYKRDFLFKLALLLLGRHHMINKSKGQVGN</aaseq>

Gene Sequence

<dnaseqindica>1..726#2579..2692#2840..2995#ATGGCCGCATCTGCAGGTCCAGGCGTCGTGGTGGTGGCGCTGGTGGTGGTGGTGTACCTCATCTTGTTGATCCGGCCGGCTGCGTCATTTCGCGTCAACGTCGGCGTGGGTATCGGCGGCGGCATCGGCATCGGCAACCAGAATCAGAACCAGGACCAGAACCAGAACCAGAATCAGAAGCCGTACTATGATGATAGCAATAACAACAACAATTACGATGAGGGCGAGGGGGAGGGCGGCGATGATCAGGAGGAGGGTCCGGAGGCGGCGGCGCCGGTGGGGCCGGGGCAGTCGTTCACCGGCGGGCGCGGGACGTACAAGTACATGGCGCACGAGTTCCTGGATGCTCACAACAAGGTGCGCGCCCAGTACGGGCTGCAGCCGCTGAAGTGGAGCAACAAGCTGGCCAGGTACGCGCGGCGGTGGTCGGCGGCGAGGCGGTTCGACTGCGTGATGATGCACTCGCCGGAGTCGCCGTACGGGGAGAACGTGTTCTGGGGGACCGGGTGGGGCTGGCGCGCCACGGACGCCGTCAAGAGCTGGGCCGGCGAGTCCTCCGTCTACGACTGGCGCGGGCAGAGCTGCAACCCGGGACAGATGTGCGGACACTTCACCCAGATCGTCTGGAACGACACCAAGCTCGTCGGCTGCGGCCGCTCCGAGTGCGTCGCCGGCGGCGTCTTCATCACCTGCTCCTACGACCCGCCGGGCAACTGGAAGGGAGAGGTGCCGCTAACCTAACCCATTCCATTCCATTCCTCCACCCACACGCGTTCCTGCACACTAGCTAGCTACCTGTCATTTCTTCATTTCTTTCTAGCTAGTGCCAGATCGATTTACTTTTAATTTCCTTCTGGAGTAGCATATATATACGTATTTCAGTTTTTTTTCTTTTGCATATATATGTTTCTTAATTTGTTAAAAACAATATTGAGTTTGAATTTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATACAGTGCAATTTCTTTTTACTGTTTTAGTAGCTTGTTTTTAGAGAGAAGATTACACACAACACACAAGGCGCCCTTCTTTATCGATCAACACGTTCGTTGCCACCGATCGAACCTCCCGTGTATAGATACGATGTAAAAGTTGTACAAGATCATTCATCCCAAATCACAAATTAACTAAGTAGATGATGTACATATTTATGCTCCTAACTTTAGTGATGATATGAATGGCAAAAGTTGCCTCAAGGCCAATAATTCAGATTGACGCGGGTATAATCTCCGTCTCATAGCCGGTTCGAAAGGTTATCTACATGAGCCAAGGCTGAGTTCCAAATAACTATTCGGTTCGGGCTACCTTTTCATTTTTAGGAGCACGTTTCTTTAAACCACTAGAGTGCAAAAACTTGGATCTATAATAAAAATTTATTGAAACAATCAAATGAATTTATTATTTATAGTTAACATTCAATTAATCATGCATCAATTACCCATTTCGTTTTATGTGCAACTAATTAGCTCAGCCAATAGCTAACCATACCCATAGGCAATTCCAAGGGGGGTGGTCCAAGTAGTCCCTAGACCACCCTCCATTTTCGCTTAATAGGGATCCCCTCCTCTTAAATTCAGATCATATATATCTACTCTATAGACAACGTATTCCATAGCATTATCATCTCTAATGGTGATCGGACCACAAGGTATCTGGTAAGATCGTGATATGAGTATGACCGGTATTTGTGGTTTTGTTTGTGCTTCACTTATCACTTTACAGTTTTGTGGCTAGTTGTCATGTATGTTGCAAATGTAGTAAAGTTGGGCCTATTGTGTCTGTAGCAAGCCCTGTAAGTAAGGTTTGGAATAAGTTCACTTTAGGTCTCTTATCTTGACGTTCAGTTTGAATCACATCCTTGAACCACCATACTAGATATAGTACATCACTCATTTTTTAAAACCGGTACATATATAGTCCTAAGATAGTATTATAGGCTGCTTTAGCTGACATGGCACCAGAAAAAAATAGTTTGGGTACTCTATATCTTCTGGTGTAGTAGGTCAAGGATGGAATTCAGATTCAACGTCAACAGGAGTGACCTAAAGTGAACTTATATCGCAAGCTTTGTATTTTACATGGGCCTGCAGAGACACAAACGGATCGAAGATTCGGAGATGGTCTGGCTGGCCCGTTTATCTTGTTGGGATGGATACGGAAATCATAAAGGTATGTCCTGACGGAAAAACACCCAAGATCAACTTTAGGTACTTTTAAGGCCCAATTCAACTTGTGCAATGTGACTTGAAGAAGATGGGCGTGCACATACATACACGTCTTTGCACGAATCGACGCGACAATGAATCAACAAATCATCATGATTCTATTATATAGTTCTTCCACGGTGGGCAAAATTTATTTCTACCATAAATATGGAGATTATATTAGAGGCCTCCTAAGGAGACTGATGATGAAGCTGCTGGACCCCTACAAGCCCCCTATACAATGCGGTCCATCAGATGGGATTAGTAGTAGTAGTAGTAGTAACTCAACAAGTCCGAATTCTTTGTTTCTTCATTCTTTATGATTATATATATATATGTATAGAAGTCATGCTGCTGCTGCTGCTACTGGAGGATTGGACGCCTATATTCAGCTGGATCAGTTGCTACTGTCCGGCGATCCATACCCGTAGGGGTTCTTGCTCGCCCAATTCCACAGGTCCCTGCACATCTCCTCTACCCCGTATTTTGCCCTGGTGTGAAGAGAGTACATGATGATTTTAATATTTCATTTCATTACAGTACAGATGAAATGATGTGAGATGCTATATATATATATATATCCTGATACTTACTTCCATTTCAGTTCCTTCTCAGCTTTGGCAGTTTGAGCGTAAACGATCTCGGCATCTCCAGGCCTTCGTCCAGCAAATACAAGCGGGATTTTCTGTTCAAGTTGGCATTATTATTGTTAGGACGACATCATATGATCAACAAAAGCAAAGGACAAGTTGGGAATTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA017440