BGIOSGA017442

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Revision as of 02:18, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA017442| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA017442, complete gene.| tag = OS05G05...")
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Gene Name

BGIOSGA017442

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA017442, complete gene.

LocusTag

OS05G0594800

Ensembl Transcript ID

BGIOSGA017442-TA

Ensembl Protein ID

BGIOSGA017442-PA

Length

3414

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:30959171..30962584

Sequence Coding Region

30962561..30962584,30961685..30961777,30961489..30961548,30961263..30961301,30961095..30961169
,30960935..30961001,30960789..30960858,30960303..30960421,30960187..30960210
,30960013..30960104,30959854..30959931,30959707..30959761,30959171..30959295

Genome Context

<gbrowseImage1> name=IndicaChromosome05:30959171..30962584 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:30959171..30962584 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGAGCACAGAGCCCCTACAGGATATCATGTGCGAGTTTCGTGCGGGTAAGATGTCCCTTGATGGAACACGAGTGATCCCAGACACACGCAAGGGTCTTGTTCGCATAGGAAGGGGTGAAGAAGGCTTGGTTCATTTTCAATGGCTTGATCGTGGACAGAATCTAGTTGAAGTTGATCAAATTGTCTTCCCTGAGGAGGCTGTCTTTGAGAAGGTAACACAATCTTCTGGAAGGGTTTACATCTTGAAGTTCAGGCACGATAGCAGGAAATTCTTCTTCTGGATGCAGGAGCCAAGTGCTGATGACGACTCACAAATATGTCGCCAAGTTAATGCCTACATAAACCGACCATTAGATGGTGAGGCAGTTTCTATTGAAGCTGAAATGTCACATGAAGACACAGCTGATGATGACATCTCCTCCAGAGCTGGGAATTTAGTTGATCAGAGCATGACTGCTGATTTAGCTGGTGAGGTGACATCTGCTGCTGGGCCAGTACGGTTGGAAGACCTGCAGAGAATACTGAGTGCTATACAGCCATCAGATGCTGTGGCAGACCCTGATGCTGGATTAGGATTAGGAGACATCTTGAAGCCTGATTTGGTGTTACCACTCATGGAAACTTTGCCCATTGAACAGTTGGCATCATATCTTCCAGAGGGCCCATGGACTGCTGGTGATATTCTTGAACTATTGCAAAGTCCTCCTTTGCGGCAGCAAGTAGAAGCGTTTACCCATGTGCTGCGGACTGGGCAAATAGATCTAGCACAATTTGGAGTTGACCCTAGTAAATATAAATTCACAGTAGCTTCGTTCCTGGAGGCTCTTGAAGACTCCGTGGCAAAAGCTTCAGGAGCTGGAGACAAGGATTCAGAGTCCCAGAGAGGCGGTGGAAATGATCCCATGGATGAGAGTTAA</cdnaseq>

Protein Sequence

<aaseq>MESTEPLQDIMCEFRAGKMSLDGTRVIPDTRKGLVRIGRGEEGLVHFQWLDRGQNLVEVDQIVFPEEAVFEKVTQSSGRVYILKFRHDSRKFFFWMQEPSADDDSQICRQVNAYINRPLDGEAVSIEAEMSHEDTADDDISSRAGNLVDQSMTADLAGEVTSAAGPVRLEDLQRILSAIQPSDAVADPDAGLGLGDILKPDLVLPLMETLPIEQLASYLPEGPWTAGDILELLQSPPLRQQVEAFTHVLRTGQIDLAQFGVDPSKYKFTVASFLEALEDSVAKASGAGDKDSESQRGGGNDPMDES</aaseq>

Gene Sequence

<dnaseqindica>1..24#808..900#1037..1096#1284..1322#1416..1490#1584..1650#1727..1796#2164..2282#2375..2398#2481..2572#2654..2731#2824..2878#3290..3414#ATGGAGAGCACAGAGCCCCTACAGGTAAACTCCTCACTTTGCCTTCTAGTGTTTCTGCAAGTATTGGTTTTTTCAAATACCGAATTTCCTGTTAGTGTTTAACTGCGATGATCGGTTGCTGTTGATTTGAGATCATGATTTAGCTGCTGCAAGTTCCATCTAAAATGACATTATGGGCTGTTTGGTTGGTATCAACACTTTGCCAAAAGGATAATTGAGGTTGTCTTTTGTGGTGGACAAATTCTCAACTATTCGCAAATCTTGCCAAGTAATTGAGTGTATGACAAGTGAGCCAGCTGGTTAAAGAAAGCCTGACAGAAAATGGCATTGGTAGTACCATGTTAATGGGCTGTTTTGTGTGTAATATGTACAAAGGCCTGAACCATGTTTGGACCAGTTTTTCATCGTACATGATACAAAAAAAGAAAAAAAAACATAGATGTCTCTTTTGTATACTAGGCAGTTTGTTTCTTTATGTTTTAGTTCTTTTCAGAAAACTGGGATAGAACTTCTGTTAATCTTTGCCTGCACTCTAAAAGGCCAAAATATTTAGCTAGCAATTTGTAGCAAGAAAATCTTCTGATAAGAAATGTAGGTTGTGTATAGTGAGCTTTCAGTAGTTCAGTGAACTGAGTTAATTTTCTGTTGCAGTGCATGGTGCTTATTGATCTATCTCAAATTAAGATCTTGTGCTTATTCAGAATCTTAATGACCTATATATTTATTTTTGCCATCTCATTTATCTCTGCTATGATATAACAAGGTGTTGAGCTTCTATTTAAAAACAATCTCTCATGTGTTTGTCAGGATATCATGTGCGAGTTTCGTGCGGGTAAGATGTCCCTTGATGGAACACGAGTGATCCCAGACACACGCAAGGGTCTTGTTCGCATAGGAAGGGTATGCATGCTAAAAGTCATACTTATCTTGAATTGAAGTTCTGTACTTCTATTTGTCCAGTATAACTTATAAGCCATTTGCATTCTCATATTTTATGGGGATTTGCAGTGCAGTTAACATATCCACTTGTTTGTAGGGTGAAGAAGGCTTGGTTCATTTTCAATGGCTTGATCGTGGACAGAATCTAGTTGAAGTTGTATCCTCTCGAGCATAGATAGTAGTTAGTAGTCATCGTGCACTCATTTTTTAATCTGCAAATACTGTACTTGTATGACTCGTATGTTTGAACTTTGAACTTGGCTGTGTCTGTTTCTCCTGATTTCCATTGTGTATATCCTAGGAAATTATCGTACTTTTGTATATCCTTGATTCCCTTTTCACAGGATCAAATTGTCTTCCCTGAGGAGGCTGTCTTTGAGAAGGTATTGAATATAGGTTCAAGTTTATTTTCTTCTGCAAGACCATCTTAGTGAACCTCTTGGGCTTCATTGATGATTGTAATTCAACTTAATCAGGTAACACAATCTTCTGGAAGGGTTTACATCTTGAAGTTCAGGCACGATAGCAGGAAATTCTTCTTCTGGATGCAGGTCAGTTGAGTGTGTGTGTGTGTATCTGTTTGAAAACCACAGAAGTCCTTCCACCAGCTAAAATTTACTTGTGTTTTGCTCTTTACTGTGCAGGAGCCAAGTGCTGATGACGACTCACAAATATGTCGCCAAGTTAATGCCTACATAAACCGACCATTAGGTATGCTGAACGTTGGGATCTCAACTCTTAATTATGCGCTCATTTTTCTTGTGTCTTAAGTTGTATGGGCGTGCAGATGGTGAGGCAGTTTCTATTGAAGCTGAAATGTCACATGAAGACACAGCTGATGATGACATCTCCTCCAGGTAATTTTAACGAACTGCAAGATGCAATGTGCAGCACAGAAAAACCTAGACGTTTGCATTGCAATCTTTATTTTTCAATGGGGCCGTCAGAGTAACAGATGGATGCACGTTCATTATAAACCACAAGTATATTCACTCCAATTTCATGCATAAGTTAACACTATCTATGTCTAGCTGAGTTTATTGTGCACTGCCTTTCATTCTTCCTATTTTCACACTGATATTTTTCCTGCTAAATATATATGAAAGTGTGGCCTCAATTTGTTCCTGATATGGCATTCATGCATGCGTGTTGAGTTTTGGGTATAATGAATTAATGACCATTTAATAATTCTAACCCCTTTGTTTCCTTCTTTCTTCTCATCAGAGCTGGGAATTTAGTTGATCAGAGCATGACTGCTGATTTAGCTGGTGAGGTGACATCTGCTGCTGGGCCAGTACGGTTGGAAGACCTGCAGAGAATACTGAGTGCTATACAGCCATCAGGTATCAGCTGAAAAATCATGTCACTTTTGAAATGTTCTTCCATTTGACCACCTTCTCATTTTATTTTACTTGCATTCGCCTTGTAATTTCAGATGCTGTGGCAGACCCTGATGCTGGTAATTACAGTACAATACTCTATTGATTCACTTTTCTTCAATGATTTGCTGTATGTATCAGTACTTTTAACCGCTGTAACAGGATTAGGATTAGGAGACATCTTGAAGCCTGATTTGGTGTTACCACTCATGGAAACTTTGCCCATTGAACAGTTGGCATCATATCTTCCAGAGGTTTGTAACTTTGTATTTGTCATCCTGGTTCTTACTTCAATTGACTCTTCCACTCATTTTATTGTGCTTGCTTAATTCCAGGGCCCATGGACTGCTGGTGATATTCTTGAACTATTGCAAAGTCCTCCTTTGCGGCAGCAAGTAGAAGCGTTTACCCATGTTAGTAATTCATCTTTCTATTGAACATCTTGGTGAATCGTGACACAATGCTTCAAATGTTATTTTTATTCTGATATTTGCATGTATGGCAGGTGCTGCGGACTGGGCAAATAGATCTAGCACAATTTGGAGTTGACCCTAGTAAATGTAATCCTTCTCATCTTCACTTATATTGACAACCAAATTTCTCGTTTATTTGCACTGAACAGTAAAGTTAAATGCAGCATGTAGCAGGCTCCTTTTTTTTTTCATTCGCAAATACACGGTAGATAATTTGTGCATGTGGCTGAAACTTTTATTTATGTATTGAAAAAACACAAATTCTGCAACTGATACCTCAATGACCATGATATTTACCTTGCTAGTCTAGCTTTTACTTTCAATGGCTTATGGAGGTGACCCCTGCCCAAAATATGAGCGTTGTTTTTCTGCTAGACGACAAACATCCTTGATGCTAGTTGGTCAAGTCTGAAAATGATTTATTTAGTATTTGTAAAATCTGGAGATGGAGTGAGATGTTTTCGGAAAACTTATTTGATGGGTGTCTTTGTGGCACAGATAAATTCACAGTAGCTTCGTTCCTGGAGGCTCTTGAAGACTCCGTGGCAAAAGCTTCAGGAGCTGGAGACAAGGATTCAGAGTCCCAGAGAGGCGGTGGAAATGATCCCATGGATGAGAGTTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA017442