BGIOSGA017444

From RiceWiki
Revision as of 02:18, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA017444| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA017444, complete gene.| tag = OS05G05...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA017444

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA017444, complete gene.

LocusTag

OS05G0594200

Ensembl Transcript ID

BGIOSGA017444-TA

Ensembl Protein ID

BGIOSGA017444-PA

Length

4178

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:30929738..30933915

Sequence Coding Region

30933634..30933915,30932202..30932269,30931821..30931849,30931317..30931735,30931085..30931225
,30930825..30930941,30930666..30930719,30930146..30930262,30929926..30930019
,30929738..30929778

Genome Context

<gbrowseImage1> name=IndicaChromosome05:30929738..30933915 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:30929738..30933915 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCCAGTGTCGCGGATGATGATGGAGTCGAATACGATGGCCAAGGAGATGGCCGTGCGGCACCACCTCCTTCCGGGGTCTCCTCGCCGCCGCACCGCACACAACCTCTCATCTTCCTCCCTCCGCAAAAGCTCCGACGCCTCCCTCCTCCACAAGGTTCCCTGCGCCGCCCTCCGCTCCCTCCTCGCCAATCTCAACGACGTCCTCCTCACCACCAGGCTCTTCCTCCTCTTCCCCGCCGTCCTCCTCGCCATCGCCGCCACTTACCTCCACTTCGGACAGGTGTGGGTGTTTGTGCTTAGCTTAATCGGCCTCGTTCCTCTTGCTGAGCGACTCAGCTTCCTCACCGAGCAGATTGCATTTTACACCGGTCCTACTGTGGGAGGACTACTGAACGCGACATTTGGGAACGTGACGGAGGTGATAATCGCGCTGTTGGCGCTGCGAGAAGGAAAGATTGAGGTGGTGAAATGCTCCCTGCTGGGATCCATCCTCTCCAACCTGCTGCTTGTCCTCGGCACCTCCCTCTTCCTCGCCGGCATCGCCAACCTCCGCGCCCACCAGCCGTACGACACCAAGCAAGCTCACGTCAACACCGCCCTCCTCATGCTCGCCGTCCTCTGCCACTCCCTGCCGCTCATGCTCAGGTACGCCGTCACCTCCGGCGACCACGCCATCGTCTCCGGCGACGCCGCCCTCCACCTGTCGCGTGCCTGCAGCATCCTCATGCTCATCGCCTACCTGGCCTACCTCTTCTTCCAACTCAACACGCATCGCCAGCTGTTTGAGCCCCAACAGGTTGAGGATGATGATGACGATGATTTAGTGATCGCTCAAGATGATGAGCCAGTACTGGGATTCTCGAGTGCCATGATTTGGCTGGCTCTCATGACTCTCCTGACTGCGCTCTTGTCAGGGTATGTTGTGAGCACAATTGAGGCGGCCTCAGAATCATGGGAACTATCAGTGAGCTTCATTAGCATCATCTTGCTTCCCATCGTTGGGAACGCAGCAGAGCATGCCGGTGCCGTCATATTTGCTCTCAAGAACAAGATGGATATTACTCTCGGAGTGTCTTTGGGCTCTGCCACACAGATCTCCATGTTTGTGGTTCCAGTGAGTGTGATTGTAGCCTGGACTATGGGAATCCCAATGGATCTTGATTTCAACCTGCTGGAGACTGGTTCTCTGTTTCTAGCAATATTAGTGACAGCCTTCACCCTCCAGGAGGGAGAATCACATTATCTGAAGGGATTGATTCTTGTCCTGTGCTACGCTGTCATCAGCGTGTGCTTTTTCGTTATAAGACGGCGTTCTGCAGGAGGGACGGACGGTGTTCACCATCTGGATGTGATTGTGTAG</cdnaseq>

Protein Sequence

<aaseq>MPVSRMMMESNTMAKEMAVRHHLLPGSPRRRTAHNLSSSSLRKSSDASLLHKVPCAALRSLLANLNDVLLTTRLFLLFPAVLLAIAATYLHFGQVWVFVLSLIGLVPLAERLSFLTEQIAFYTGPTVGGLLNATFGNVTEVIIALLALREGKIEVVKCSLLGSILSNLLLVLGTSLFLAGIANLRAHQPYDTKQAHVNTALLMLAVLCHSLPLMLRYAVTSGDHAIVSGDAALHLSRACSILMLIAYLAYLFFQLNTHRQLFEPQQVEDDDDDDLVIAQDDEPVLGFSSAMIWLALMTLLTALLSGYVVSTIEAASESWELSVSFISIILLPIVGNAAEHAGAVIFALKNKMDITLGVSLGSATQISMFVVPVSVIVAWTMGIPMDLDFNLLETGSLFLAILVTAFTLQEGESHYLKGLILVLCYAVISVCFFVIRRRSAGGTDGVHHLDVIV</aaseq>

Gene Sequence

<dnaseqindica>1..282#1647..1714#2067..2095#2181..2599#2691..2831#2975..3091#3197..3250#3654..3770#3897..3990#4138..4178#ATGCCAGTGTCGCGGATGATGATGGAGTCGAATACGATGGCCAAGGAGATGGCCGTGCGGCACCACCTCCTTCCGGGGTCTCCTCGCCGCCGCACCGCACACAACCTCTCATCTTCCTCCCTCCGCAAAAGCTCCGACGCCTCCCTCCTCCACAAGGTTCCCTGCGCCGCCCTCCGCTCCCTCCTCGCCAATCTCAACGACGTCCTCCTCACCACCAGGCTCTTCCTCCTCTTCCCCGCCGTCCTCCTCGCCATCGCCGCCACTTACCTCCACTTCGGACAGGTACCCTCCTCATCCATCTCTCTCCAATTTACGTTGCTCGTCCATTCTTATGACAAGCCACAAGCATGCTCATATCAATACTAGTACTAGGCAAGGAACTGTGGTCGATAATCCCAGCCCTTTTTTTTTTTTTACGGATGCGCAAAAGAATTACACGTCAATATATTAGAAGAAAAAAGTATAATTACACAACACAATCAGCCAGACCGGCTTATACTAGAGTAAGAGAGAAAAAACAAAATAAAAAGCTAAAGCTTAAAAAAACTACGGGGCTAAACACAAAAAAACTCCAATTGTTGGCCAAGCCCTATAATCCCTACCCATGGCGCCCATCGTATCGTTAGGCAGTGAAGGTCGTGAGTCTTAGCTCTTGAACATTTATGTTACCGCAAGATAAACTGCATTTGTCTCATGGGTTTCAACGATGTTTGGTTTGTTCGTTAGATTCGAGATAAGAAAGATGTGAGTAGTGCGTACTGTGTCGCTGAGAAATATGTTTGGGGCCATGTTCATCAAGAGATGCACTAAATTACGTCAAACCAAAGTAAATTAGGAGGGTATTTTAAACTTAGCATAACAGGTTTTTTTTTATAATTTTCCAAAAAAAAAAAACACTCCACCAACAACACATGACGAATACAAGATCGAGCCGGATGATGGCGATTAGATTAATTTGTACTAGCTGAGTGCATGTGCTCGCGCATGTGGTGAAGTTGCCTGCAGCCTGTGAAACCCTATTAAAATACAAACAGATGGAATCATGGAATTGCAACAATTAAGCAAGTTGACACTTGACACACCCATCACATGCATGGCCAGGCTAATATTAATCCCCCTCCTCACGGTCACGGATTTTTCGTCGTCGCATCTCAGCCATATGGCAACGGTGCGTCCTAGATACACTCCACTAGTACTGTACTAACCAAAAACTACTGTAACATCCCTAAGCTAAAGGCCTGTTTAGATCCCTGTGAAATTTTTCACCCTGTCACATCAAATGTTTGGACATATACATGAAGTATTAATATAAAAAAAATAACTAATTACACAGATTGTGTGTAAATTACGAGACAAATCTTTTAAGCCTAATTATTTCATGATTTGACAATGTGATGCTACAGTAAACATTTACTAATGATAGATTAATTAGGCTAATAAATTTATCTCACAGTTTACATGCGGAATCTGTCATTTGTTGTTTTGTTATTAGTCTACGTTTAATACTTCAAATATGTGTTCGTATATCCGATACGCCAAAACTTTTCACCTCTAGATCTAAACACAACCTAAGTACAAACTAAATAATCAACCATTCAAAAAAAAAACTAAATGATCAACCAGCTTTCTTACAGTATTAATTGCAGGTGTGGGTGTTTGTGCTTAGCTTAATCGGCCTCGTTCCTCTTGCTGAGCGACTCAGCTTCCTCACCGAGTAAGCTCCCTTAACTAATTCCTACCATGCTCAGATAATGTACATCATGCATGCATGCAACCATATACTCTTCTGATCATAAGTCGTTCTGATTTTTTTCTAAATTAATCTTCTTTAGTTTTAATTAACTTTATAATAATATTTTTAACATAAAACAAGAAAAAATATAAAATATATTGAATGTTAGTTTTAATAAAATTAATTTAATGCTGTAAATATTAATATATTTTTTTATAAACTTGATCGAACTTTTAGAAAAGTCAAAGTGACTTATAAGTATAAATGGGGGAGAGTAATTATAATAGTGATCTTGAATTTTGTGACAATTAATTGGTTGCGTGTATGCATGCAGGCAGATTGCATTTTACACCGGTCCTACTGGTAAGTGAATTCCATGCATGCTAGCTATTCGTTTCGATCAGGATCAAGTGGAAATGCATCAAGTGAAGTGCATGCATGGTTGCAGTGGGAGGACTACTGAACGCGACATTTGGGAACGTGACGGAGGTGATAATCGCGCTGTTGGCGCTGCGAGAAGGAAAGATTGAGGTGGTGAAATGCTCCCTGCTGGGATCCATCCTCTCCAACCTGCTGCTTGTCCTCGGCACCTCCCTCTTCCTCGCCGGCATCGCCAACCTCCGCGCCCACCAGCCGTACGACACCAAGCAAGCTCACGTCAACACCGCCCTCCTCATGCTCGCCGTCCTCTGCCACTCCCTGCCGCTCATGCTCAGGTACGCCGTCACCTCCGGCGACCACGCCATCGTCTCCGGCGACGCCGCCCTCCACCTGTCGCGTGCCTGCAGCATCCTCATGCTCATCGCCTACCTGGCCTACCTCTTCTTCCAACTCAACACGCATCGCCAGCTGTTTGAGCCCCAACAGGTACGTCCCGTCTGTGATTGATCGATGCATGTCCTGTACTACGTTCGATCCCACCAACACCAAATGGTAATTATTATATTTTTCTAATTAGGTTGAGGATGATGATGACGATGATTTAGTGATCGCTCAAGATGATGAGCCAGTACTGGGATTCTCGAGTGCCATGATTTGGCTGGCTCTCATGACTCTCCTGACTGCGCTCTTGTCAGGGTATGTTGTGAGCACAATTGAGGTACAGTATATATATATATCATCCTAGTACCATTTACATATATGCTGCTGTACTGTACTGTATTAATCTTCAGTGAATTGGCAAGATGCATGCATAATGAAGCTAGCTAAACCACCTTTTGTACGTATCTTGTGAATGTACAGGCGGCCTCAGAATCATGGGAACTATCAGTGAGCTTCATTAGCATCATCTTGCTTCCCATCGTTGGGAACGCAGCAGAGCATGCCGGTGCCGTCATATTTGCTCTCAAGAACAAGATGGTACTCCATATAATTAAGCAGCACACACATACAGTATATATATATATATATGCAGCAGAGTATTGGTCTTTCTTATCATTAATTTGTTGTGACTTGTGACGACAGGATATTACTCTCGGAGTGTCTTTGGGCTCTGCCACACAGATCTCCATGTTTGTGGTATGTAGGAGTAGCTAGTACGTAGTACTAGTAATTTACTAACCTCGCTCTATACATTGATACTCTCTCCATTTCATAATATAAGACACAACCACTTTTTTTTAGATGTTCCATAATGTAAGACATACATACACATGCATGCCATTAACTATGACAATTCTCCATTAAATTACTATTTTTTTTAAAATCCTTCACTCTCACATTCTCTAACTCTATTGGATGCATGCATTACATTTATTAGGATGATCCAAACTACAAGGTGATAATAACTATTTCTTGGTCTTTGGGTTAAGGGTGGTTGTGTCTTATATTTTGGAATGGAGGGAATAGTTATTAGTGGAGTATGTATGTAGACATGCGTGTTAGTATGTTGTTGTGATGGAAGTGATGAACTGTGCGGCAGGTTCCAGTGAGTGTGATTGTAGCCTGGACTATGGGAATCCCAATGGATCTTGATTTCAACCTGCTGGAGACTGGTTCTCTGTTTCTAGCAATATTAGTGACAGCCTTCACCCTCCAGGTAAGTACTAGCTAGTAAAAGCTGAAATTATTGGTTCGATCTTGTTCAGAATCAAAGTGAAATACAGTAGTACAGTAAAACTCTTAAGATTGTCGGTATTTTATTAGAAGTATATATATGTTTCAGGAGGGAGAATCACATTATCTGAAGGGATTGATTCTTGTCCTGTGCTACGCTGTCATCAGCGTGTGCTTTTTCGTTATAAGACGGCGTTCTGCAGGTATATGTTATGTTATGTACTTTCTACTACAGTATGTAGGAAGCACTACTAGACAGTAGAGTAGAGTAGTAATTTGGCATTTGATAGTGTGGTCGATCGCCGGCCGACTGATCATATATATACGTGTGCGTGTGTGTGTGTATGTAGGAGGGACGGACGGTGTTCACCATCTGGATGTGATTGTGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA017444