BGIOSGA017451

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Revision as of 02:18, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA017451| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA017451, complete gene.| tag = P0663C0...")
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Gene Name

BGIOSGA017451

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA017451, complete gene.

LocusTag

P0663C08.13

Ensembl Transcript ID

BGIOSGA017451-TA

Ensembl Protein ID

BGIOSGA017451-PA

Length

3628

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:30889011..30892638

Sequence Coding Region

30892516..30892638,30892362..30892430,30892146..30892273,30891942..30892041,30891419..30891486
,30891143..30891284,30890664..30890780,30890358..30890483,30889366..30889449
,30889195..30889274,30889011..30889107

Genome Context

<gbrowseImage1> name=IndicaChromosome05:30889011..30892638 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:30889011..30892638 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCACACGTTATTGGATCGTGTCTCTTCCCGTGCAGACTCCTGGCTCCACCGCCAATTCTCTCTGGGCGCGCCTCCAGGACTCCATCTCGCGCCACTCCTTCGACACGCCGCTCTACCGGTTCAACGTCCCCGATCTCCGCGTCGGCACGCTCGACTCCCTCCTCGCCCTCAGCGACGATCTCGTCAAGTCCAACGTCTTCATCGAGGGGGTCTCGCACAAGATCCGGAGGCAGATCGAGGAGCTAGAGCGCGCCGGGGGTGTCGAGAGTGGGGCTCTCACCGTTGACGGCGTCCCCGTCGACACCTACCTCACCAGGTTTGTGTGGGATGAGGGCAAATACCCAACGATGTCACCGCTCAAGGAGATTGTCGGCAGCATCCAATCACAGGTCTCCAAGATTGAAGATGACATGAAGGTTCGAGGAGCGGAATACAATAATGTAAGGAGCCAGCTTAGTGCGATCAACAGAAAGCAAACTGGAAGCTTAGCAGTTCGTGATCTTTCCAATCTGGTAAAACCAGAGGATATGGTCACATCAGAACATCTAGTGACACTCCTTGCAGTTGTTCCTAAGTACTCTCAAAAGGATTGGTTGTCAAGCTATGAGTCCCTTGACACATTTGTGGTACCGAGATCGTCTAAAAAACTTTATGAGGACAATGAGTATGCTCTCTACACGGTAACATTGTTTGCTAAGGTTGTTGACAACTTTAAGGTCCGTGCACGTGAAAAAGGTTTCCAGGTTCGCGATTTTGAGTATAGTTCTGAAGCACAGGAAAGTAGGAAGGAAGAGCTGGAAAAGCTAATGCAAGACCAGGAAGCAATGAGGGCATCACTTCTGCAATGGTGCTATGCCAGCTACAGTGAGGTATTCAGTTCCTGGATGCACTTCTGTGCTGTGCGTGTCTTTGTAGAGAGCATTCTTAGATATGGTCTTCCCCCATCATTCCTGTCTGCTGTTCTAGCACCTTCTCAAAAGGGTGAAAAGAAAGTAAGGAGCATCCTGGAGGAACTCTGTGGCAATGTCCATAGTATTTACTGGAAATCTGAAGACGATGTTGGTGTAGCTGGTCTGGGAGGTGAAACCGAGGCTCACCCCTATGTTTCCTTCACAATAAATTTTATCTGA</cdnaseq>

Protein Sequence

<aaseq>MATRYWIVSLPVQTPGSTANSLWARLQDSISRHSFDTPLYRFNVPDLRVGTLDSLLALSDDLVKSNVFIEGVSHKIRRQIEELERAGGVESGALTVDGVPVDTYLTRFVWDEGKYPTMSPLKEIVGSIQSQVSKIEDDMKVRGAEYNNVRSQLSAINRKQTGSLAVRDLSNLVKPEDMVTSEHLVTLLAVVPKYSQKDWLSSYESLDTFVVPRSSKKLYEDNEYALYTVTLFAKVVDNFKVRAREKGFQVRDFEYSSEAQESRKEELEKLMQDQEAMRASLLQWCYASYSEVFSSWMHFCAVRVFVESILRYGLPPSFLSAVLAPSQKGEKKVRSILEELCGNVHSIYWKSEDDVGVAGLGGETEAHPYVSFTINFI</aaseq>

Gene Sequence

<dnaseqindica>1..123#209..277#366..493#598..697#1153..1220#1355..1496#1859..1975#2156..2281#3190..3273#3365..3444#3532..3628#ATGGCCACACGTTATTGGATCGTGTCTCTTCCCGTGCAGACTCCTGGCTCCACCGCCAATTCTCTCTGGGCGCGCCTCCAGGACTCCATCTCGCGCCACTCCTTCGACACGCCGCTCTACCGGGTAAGCATCCTCCCCGCCTTCCTTCCTTCCTTCCTTCCTTCCGCCACCACCATCCTCACCCTCCTCCTCCGCCTCCCGCCCGCAGTTCAACGTCCCCGATCTCCGCGTCGGCACGCTCGACTCCCTCCTCGCCCTCAGCGACGATCTCGTCAAGGTAACCCATCTCTTCTCTTCTCCCCGATCTCGATCTCCCTTGCCCCCCCGCTCTCACGCGATTCCTATTATTCCTGCCGCTGCTGCAGTCCAACGTCTTCATCGAGGGGGTCTCGCACAAGATCCGGAGGCAGATCGAGGAGCTAGAGCGCGCCGGGGGTGTCGAGAGTGGGGCTCTCACCGTTGACGGCGTCCCCGTCGACACCTACCTCACCAGGTCGCTCGCTCGCTCCTGCCCCTGCTGCCTCTCAGCTTAGCGATTCCAACTCTTTTGCTAAAGCTCTCTACCTCTTCCTTCCTTTGCTTCTTCTTCTTTTCTAGGTTTGTGTGGGATGAGGGCAAATACCCAACGATGTCACCGCTCAAGGAGATTGTCGGCAGCATCCAATCACAGGTCTCCAAGATTGAAGATGACATGAAGGTGATGACCTTTTTCCCTTGCGACCACATAATCACTAGTCAAGACCCAACCTACATATAGTGCTGTTAATATGTTTCGACCCTAATGCTGTCTCTAGTCATTAATTAACGACACTTGGTGTATTCTTATTCTTCTTGTACATAAGACATAAAGTTTTGCCGTTCAGCGGGAATTGTTTGCTTGCTTTGCAACAAGTAGGCAAGTTTTGACATTATCTCCATAACGTGCAAAGTTCAAGCTAGTGAGCTTTGTTCTCCTGCCAAGTGTGTTTTTACAGGGTCTAGCTTGGTTTCTGTTTTGGTATGTTCTGTTGTTCTAGCCAGCTATCAACACAACCATATTCTTGTGATTAGGCATCCACGTCTCCTTTTTTAGCATTGAGTTATCGCGCACAACACTACAGCGTGACCTGTTGAATTTACAACAGCTGAGCTGAATGTGTTTTTTACCTTCAGGTTCGAGGAGCGGAATACAATAATGTAAGGAGCCAGCTTAGTGCGATCAACAGAAAGCAAACTGGAAGGTAGATTGCATGCCACTGAGTTTTTGGCTTTAAGCCAATTCTTTCTTGTTTTATTTCAAAGGACTCAGAAATGCGAGGGTATGGTTTCATCTTTTGTTAGTCAACTCTAATTAGTTTGTTTTCCTTCTGTATAGCTTAGCAGTTCGTGATCTTTCCAATCTGGTAAAACCAGAGGATATGGTCACATCAGAACATCTAGTGACACTCCTTGCAGTTGTTCCTAAGTACTCTCAAAAGGATTGGTTGTCAAGCTATGAGTCCCTTGACACATTTGTGGTAAGTATATGCTCTTTTATAGTGACATGGTTAGTAATAGACTGTCATTTCAACTATTTATATGATTTTCGTCCTTTCAGCAAGTTGCTTATTTTACTTTTGTAGTTTTTGTTCAATCCAACAATGTTTAGTTTGTTACCACTTGTGGCGTTAATAGTTCTACTAGCAGGAGATGTTACCCCTGTAGAAACCACTTAAAGTAAAGATCTGTTTGACCTGTAAATTCTTTACTCAGATTGTTTTATTTAGCCCTTATAAGGACCTTGTTTTTTTTTCCAGCACTACATGTTGATGTGATTAGTATTCGTAATTGGTTGTTATATTTGAGTGCTTTTTTCCTTGAACTAATTATTGATTTATAGGTACCGAGATCGTCTAAAAAACTTTATGAGGACAATGAGTATGCTCTCTACACGGTAACATTGTTTGCTAAGGTTGTTGACAACTTTAAGGTCCGTGCACGTGAAAAAGGTTTCCAGGTAAATTTGCCGTCCTAACTTTTTCATCAAAAACCTTTGTTTACACTTCACATTTAGCTTTTATCCCTAGAGCCTTAGGAGTTCCAAATAACTTGGGACAGAAATTCAGTCTTGTTTTTCTGTCCCCATCAATCTGGCAATTCTCTGTCACCCATTAACTTGTATTACGTTGAAATACAGGTTCGCGATTTTGAGTATAGTTCTGAAGCACAGGAAAGTAGGAAGGAAGAGCTGGAAAAGCTAATGCAAGACCAGGAAGCAATGAGGGCATCACTTCTGCAATGGTGCTATGCCAGCTACAGTGAGGTGCATGTCTTTTTAGGCTTATTTAATAATCCTGTCAACAATGACATTTCTTTAGAGAAGAACTTTTTTATTCTTATGAATGTCATTTTTGTTTCATGTAAGTTCTATTAAAATTACTACCAATTAATGTTTGATGTTCATTTCATCATTTTGCACCAGAATAGAGATAAATATGTTTTCATCTCCTTTAGTAGCCTGACGGTCTTAATTGTCCTTAAAAGCATCCAATTATGCGGAATCTGAACCAGTAAGAAGATATTGTCTGGTCTCAGTTGCCACTTGCCAGCAATAGATAGATGCCACGCTGTGTTTTATGTTTAAATTTTACATAAGGATTTTAGTAAGTTATAACTTCATGGCATACTGCAAGTTCTTCCTACTGCTGTTATTATCTCACTAGAACCTTATTATTCAGGGATAAATCCTTGTTTCTGGGATGTATTAATAAGCTTGTGTTTATTATCCATAATTGTCTATTTTAATTTGTGCAGAATACCATTTATGTACGTCATGCTAAAGTGCAAAACTTTGTGCTTCTCTATGTGCGTAAAAGAAAATAATTCGTGCTGTTGTTTATCTCTGCTTATGCAGTGAATTGCTGTCATGAAGGATTTGTTTACTGAACTGAGTTAGTTAGAGCCTAGCTCTATAGGCTATAGACATACTTATTACATATTCACTATGTCCCAAAAAAAAAACCAACCTAGTCAAGGATGGGATACAACCTAGTCATGTCCAGATTCGTTGTACTAGGTTGTCTCATCATGTCCTAGTCATTGACGGAGGGAGTAGCACATATGTTTCTTGATTGTTGGGTTTTGTGGTTTGCTTTTTCTTAGATTCATTCCTCGTGAACTTGTGTTTTCATGGTGCTCAGTTGTAATTGCTTACATAAAACTATTCTGCAGGTATTCAGTTCCTGGATGCACTTCTGTGCTGTGCGTGTCTTTGTAGAGAGCATTCTTAGATATGGTCTTCCCCCATCATTCCTGGTAATATATTCTACTGTTACGTAGTATATGACAGTCAAATTTGTACTTTGATGCCTGATCTAATATCATATGCTGTTTATGTTTTCATCAGTCTGCTGTTCTAGCACCTTCTCAAAAGGGTGAAAAGAAAGTAAGGAGCATCCTGGAGGAACTCTGTGGCAATGTCCATAGGTAATTCAGCGTTTGAGTTTGTGTTCATTGCATTGTTAGTCACAACATGCACCTGCTTTTGTCATTAATTGAGCCTCTGAATTGCAGTATTTACTGGAAATCTGAAGACGATGTTGGTGTAGCTGGTCTGGGAGGTGAAACCGAGGCTCACCCCTATGTTTCCTTCACAATAAATTTTATCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA017451

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA017451&oldid=46207"