BGIOSGA017455

From RiceWiki
Revision as of 02:18, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA017455| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA017455, complete gene.| tag = P0663C0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA017455

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA017455, complete gene.

LocusTag

P0663C08.7

Ensembl Transcript ID

BGIOSGA017455-TA

Ensembl Protein ID

BGIOSGA017455-PA

Length

3166

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:30837337..30840502

Sequence Coding Region

30840295..30840502,30839406..30839521,30839096..30839305,30838884..30838988,30838715..30838777
,30837978..30838089,30837810..30837871,30837519..30837701,30837337..30837438

Genome Context

<gbrowseImage1> name=IndicaChromosome05:30837337..30840502 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:30837337..30840502 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGCTCGCGCTGCGCTGCCCCGCCGCTGCCTCGCCGTCGCCAGCCAAGAGCACCTTCCCGCCCTCCTCCTCCCCGCCGCCGTCGAGGCTCCCGAGGAGGCCGCCCGCCAGCTGCAGGTGCTACTACTACGGCGACGGCGGTGGCTTCCGCAAGAACTACGACCACATCCCCAAGCAGTTCCGCGAGGAGAACCTCAAAGATGGCCTGATGGATAATTACAAGAATGTTCCTCAATTCCTTTATGGCTTAAGCCCTGCTCAGATCGAAATGTTTATGAACGATGATAATCCATATGATCGGCAATCACAGAGAGTTACAGAGGAAAGCATTTCTGCTTCTAGGAGCTATGATGAATTTGGCATGTACAACTTGTCCGGTATGCATGAGGGCCCTGCAGGTTACAGCATGGGTATGGGAATGGGCACCATGAGCATGGGCAGGGCAGGGCGAGGATATAGAAGAATGAGAAGTTCAGCTCCAGATCTGCCATCATTGCTATTGGACTCTCGAATTATATTCCTTGGAATGCCTATTGTTCCAGCAGTAACAGAGCTTATTGCTGCGCAATTTCTGTGGCTAGATTATGATGACCGCACCAAGCCAATTTACTTGTATATAAACTCCACAGGAACCATGGATGAAAACAATGGGCTGGTTGCATCTGAAACTGATGCATTTGCAATTGCTGATTTTATCAATCGAAGCAAATCCAAGGTCTACACAATCAATCTTAGCATGGCATATGGTCAGGCTGCAATGCTTCTGTCCCTTGGCGTCAAGGGTAAAAGAGGAGTGCTACCAAATTCAATCACTAAACTGTACCTGCCTAAGGTCCACAAATCTGGTGGAGCTGCTATTGACATGTGGATTAAGGCAAAAGAGTTAGACACGAACACGGATTACTACCTTGAACTGTTGTCAAAAGGAGTTGGAAAACCAAAGGAAGAGCTCGCAGAGTTTCTCAAAGGTCCAAGGTACTTCCGTGCGCAGGAGGCCATCGATTATGGGCTTGCAGATACAATCTTGCACTCTTTGGATGGTTCCTTCAAACCAAAGGATCTGACCGCGCAGTTGGCCAAAGCACAGGAGATGCGGCAATCGGGGAAGCGCCCAGCAGCTGGAGCTGGGCGATGGTCAACTCCAAGTGTCCCTAGATAG</cdnaseq>

Protein Sequence

<aaseq>MALALRCPAAASPSPAKSTFPPSSSPPPSRLPRRPPASCRCYYYGDGGGFRKNYDHIPKQFREENLKDGLMDNYKNVPQFLYGLSPAQIEMFMNDDNPYDRQSQRVTEESISASRSYDEFGMYNLSGMHEGPAGYSMGMGMGTMSMGRAGRGYRRMRSSAPDLPSLLLDSRIIFLGMPIVPAVTELIAAQFLWLDYDDRTKPIYLYINSTGTMDENNGLVASETDAFAIADFINRSKSKVYTINLSMAYGQAAMLLSLGVKGKRGVLPNSITKLYLPKVHKSGGAAIDMWIKAKELDTNTDYYLELLSKGVGKPKEELAEFLKGPRYFRAQEAIDYGLADTILHSLDGSFKPKDLTAQLAKAQEMRQSGKRPAAGAGRWSTPSVPR</aaseq>

Gene Sequence

<dnaseqindica>1..208#982..1097#1198..1407#1515..1619#1726..1788#2414..2525#2632..2693#2802..2984#3065..3166#ATGGCGCTCGCGCTGCGCTGCCCCGCCGCTGCCTCGCCGTCGCCAGCCAAGAGCACCTTCCCGCCCTCCTCCTCCCCGCCGCCGTCGAGGCTCCCGAGGAGGCCGCCCGCCAGCTGCAGGTGCTACTACTACGGCGACGGCGGTGGCTTCCGCAAGAACTACGACCACATCCCCAAGCAGTTCCGCGAGGAGAACCTCAAAGATGGCCGTGAGCTCACTTTCCCCCCTCTTCACTTCCCAAACAGGGAGCTCTATCCACAATAAGATCTTGCTAGGTTTCGCCACATGGCTTGGGCTGTTGGGCATCAGCATATTCATGCAAACTACTATCAAAATTAGTGAGCAACCAGTGCGCATTTCTTCTTACGAATTAGCCTGAAGATGACCAATACTTTTTTTTTTGTGCTTTCTTCTTCTAATCTACAGTGTTAGTTGACATTTGAGCGTTATGAAACCACAGTTTGCATTCAATCAGCAACAAAGCCAAATCTTTACCGATGAATTATGCTGTACTGTTTGAACCTATATTAATGACATACTGCCTTGTTAACAGTTTTGACGCAATTTCAACGTTCATACATGAAAAAAACTGATGTCAAGAACTGAACAAAGCCATGTAAACTGATTATCACTACGCACTGTATAGTTTGTGGTTTCTTCAGTAAAAAAAGGAACAACATCCCTCTCGCTTTTGTTTTAGCATTTCGGTAATCCAACACTAGGACTAGGAGGAGAGTCCGTTGAAGTTATTACCATGGATGGTCTATAGTCAAATGATAGACTTTATTGATTTTTGGTCCAAGATAAAATGACACTTTATGCATGAATACAGAAGGCAAGAGTTACCCTAGTTTTTATGGTGAGGTGACCATTTCTATCGTGTCTTAGTTTTACTATTTCTCGCACTTTATCACCTTATCTCTGACACTCTCATCAACCTTTATTTGTAACACTTCTTTCATGTTTGGTGCTTTCTTGCAGTGATGGATAATTACAAGAATGTTCCTCAATTCCTTTATGGCTTAAGCCCTGCTCAGATCGAAATGTTTATGAACGATGATAATCCATATGATCGGCAATCACAGAGAGTTACAGAGGTTAGTTTTGTATAGAGATGTCATTATTGTCCTTTCTTGAATTTGTGCTATGAAATTGACACAACAAAATCGATGTGATATTTTCCTGCGTGAACTGCAGGAAAGCATTTCTGCTTCTAGGAGCTATGATGAATTTGGCATGTACAACTTGTCCGGTATGCATGAGGGCCCTGCAGGTTACAGCATGGGTATGGGAATGGGCACCATGAGCATGGGCAGGGCAGGGCGAGGATATAGAAGAATGAGAAGTTCAGCTCCAGATCTGCCATCATTGCTATTGGACTCTCGAATTATATTCCTTGGAATGCCTGTGAGTCAAACTTTATGCCTTCATCATTATCCATGGCATAATATTTCAATGTTTAAATGAAATTGTTAATAACTTTGTTCCTTCTATTCTTATTGTTCTGCCGGTAGATTGTTCCAGCAGTAACAGAGCTTATTGCTGCGCAATTTCTGTGGCTAGATTATGATGACCGCACCAAGCCAATTTACTTGTATATAAACTCCACAGGAACCATGGTAAGCTGTTATCTTGAGAATTGATAATAGGTAAGCAACATGTGATGTGAACTTGTACCAAAATTATTAAAAGATGCTTATCTATATTTTTCCTGTGTTGTGACAGGATGAAAACAATGGGCTGGTTGCATCTGAAACTGATGCATTTGCAATTGCTGATTTTATCAATGTAAGCCCTTATCTTTTGTTCCTCTGATTTAGTGGAAGTTCAATACGGCATAAAAATGCTATACACGTTTTGTGTCAGTATTTTCATACAAGGTTACATCCATGAAACTGATTTCATTAGTGTGCTTATGGTGCAAAACTACTTGCTTGCAATCAATTGATTGATATTGAGCCATAGAGCCTGGTTCTTACAACCAGATTAGGGGAAATGGCACCTGTTGGGATGTGAGTCTAGAGCGGTATATTCTGCGTATTAAAATTTTTCTTGAATATACTATGAAAGATATAAGTATTTTTTGTCTTGTTAGAGTTGTATTTGCTAGTGGAGATGCTAGTACTATTTACAACTTTGCTTGCACAGTTTCGCTTTTCTAAGGTTAGTACACTTGAATCAATTTCAGTTATGTGATTGGTCAACCATGGCAACTGAATCTAGAGAAGATGGCCAGCCTGATGTTTTACACATTAACACAAAAATTTCATGGATATAAACATTAAAGTGACTGAATCAATAACATATGGCCAGGAATTCTAAAATTGAATGAAACACAGTTTAAGCATGGACACAATGGCTTTGAGGTAGAGTGACAACTGACAGGTGCTCTTTTTTTTGGGGGGTCTTGTAGCGAAGCAAATCCAAGGTCTACACAATCAATCTTAGCATGGCATATGGTCAGGCTGCAATGCTTCTGTCCCTTGGCGTCAAGGGTAAAAGAGGAGTGCTACCAAATTCAATCAGTATGTTATTTTTCTAAGTTTCATTGTTTCCTTTTTGCAATTGAACGTGTGCATGTTTTTTTTGTGACTGACCTTGTGGTCTGAAAACATCATTGTCATGCTTCAGCTAAACTGTACCTGCCTAAGGTCCACAAATCTGGTGGAGCTGCTATTGACATGTGGATTAAGGTCACATCCACCTCTTCTTTTCAGTATCTATCTCAGTATCTGACACACTACATGCACTACGGGCCTTGCGAATTGCGAGGACTGAATGTTTTACTATTCTGTGCTCAGGCAAAAGAGTTAGACACGAACACGGATTACTACCTTGAACTGTTGTCAAAAGGAGTTGGAAAACCAAAGGAAGAGCTCGCAGAGTTTCTCAAAGGTCCAAGGTACTTCCGTGCGCAGGAGGCCATCGATTATGGGCTTGCAGATACAATCTTGCACTCTTTGGATGGTTCCTTCAAACCAAAGGTACTTTTTGGTCCATCATTCATGTGTTGTGGTACGTCTGCATAGGTAGCTTTCCCCTGACTAAATCCTTCCTGGAATAGGATCTGACCGCGCAGTTGGCCAAAGCACAGGAGATGCGGCAATCGGGGAAGCGCCCAGCAGCTGGAGCTGGGCGATGGTCAACTCCAAGTGTCCCTAGATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA017455