BGIOSGA017466

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Revision as of 02:19, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA017466| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA017466, complete gene.| tag = OsJ_197...")
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Gene Name

BGIOSGA017466

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA017466, complete gene.

LocusTag

OsJ_19723

Ensembl Transcript ID

BGIOSGA017466-TA

Ensembl Protein ID

BGIOSGA017466-PA

Length

4875

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:30643577..30648451

Sequence Coding Region

30648045..30648451,30647308..30647485,30647031..30647206,30646794..30646949,30646519..30646702
,30644884..30645067,30644722..30644774,30644562..30644599,30644059..30644473
,30643577..30643771

Genome Context

<gbrowseImage1> name=IndicaChromosome05:30643577..30648451 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:30643577..30648451 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCACCCGCAAGCGCCTCGCTGGCGCCGCCCTCGTCTGCCTCTCGCTCTTCCTCCTCTCCCGCGCCCTCCTCTTCTCCCAAGACGACCCGGAGCCCGTCAAGCGACCGGACGAGGCGTCCTCAATCTCATTGCCGCCCGACCGCATTGCCATTATTGCTGCTGCACCTGCGCCGAGCCCAGCTACTGCTGCTGCTTCCGATGGCTCGCCGGCGCCGGCCCAGGATGAAGTCCGGTGCGACCTGTTCGACGGCAGCTGGGTGTACGACCCGGCCGGCTATCCGCTCTACGACGCCGGGGAGTGCCCCTTCTTGAGCGACCAGGTCACCTGCCGGAGGAACGGGCGGCCGGACTCCGGCTACGAGCACTGGCGGTGGCAGCCCAGGCGGTGCGCCGCCGCTCTCAGGCTGCGTGGTGGGGAGATGCTGGAGCAGTGCCGGGACAAGCGAGTGGTGCTCGTCGGCGACTCGCTCAACCGCAACATGTGGGAGTCGCTCGCCTGCATCCTCTACGCCGCGGCGCCCGACCGCTCACGCGCCACCGTCGACGACGCCAGCGCCGACCACAAGATCTTCCAAGCATTGGATTACAACTGCACGGTGGAGTTCTACTGGAGCCCGTTCCTGGTGGACCTCGACGACCAGACCAGGGTGCTGAAGCTGGACAGCCTCCCGGCGACGACGTATCGCCGGCTCGCCGCCGCCGACGTGCTGGTGTTCAACACGGGCCACTGGTGGACGCACACCGGCAAGTTCAGGGCGTGGGATCACCTGGAGAGGAACGGGAAGAAGGTGGAGATGGGAGCGGAGGAAGCCTTCAACCGCGCGCTCCGGACATGGACGCGGTGGCTCGATCGAAACGTGGACTCTCACAAGACCATGGTGTTCTTCCGCAGCATCTCCCCCGAGCACAAGAACAAGAACTGGTGCTACAACGAGACGGCTCCGATGGCGAGGGCGGAGGAGTACGTGGAGGCTTTCCCGAGAGGGATGGTGTCGATCGTGGAGAGGAACGTGAGGAGGGCGAGGACGGCGGTGGGGTACCTGGACATCACCCGGCTGTCGGAGCTCCGGCGAGACGCGCACCCGTCGGTGTTCACGCCATCGACAAGAAAGAGGGATGTGAAGAAGCTAGTGCAAGAACATTCACCTTGTCAGCCATCAACTCTACAGGCTGATGCTTATACTACTGGTTTGTCGATGAAGGAAATTGAAAGAAGACGGAAGATTGGTGCAGCGAACAAGGGAAAGGTTCCCTGGACAAAGGGGAGGAAACTAAGCAAAGAGCACAAGGAACTCATCAAGCGAAGGACTACCGAGGCTCTTAGAGATCCCAAGGTTAGGAAGAAAATGCTAGGACATCGACAATTGCATAGACAAGCAAGCAAAGACAAAATAGGTGCTGCATTGAGAAAGATCTGGGAGAGGCGAATGGTGGCTGTCAAAGCAAGACAGGAGGTTCTTCGCATATGGTCAAATAGCATTGCAGAAGCAGCAAAATATGGTGACTACTGCCAAGATAAACTGGATTGGGATAGCTATGACAGGATAAAGTCTGAGATGATATCCATGTTCCTATGGAATAAAGAGAGGGAAAGAATAATGAAGAAGCTTGAAAAGGCAGAGGCGAAAATTGTAGCCAAGAAGCTTCAGGCAGCAGAGAGAAGTAAACTACNAACTAGAGGGATAAAGAAGCTGCAACATCAGAAGTTGGTTCTGCGAAAATCAGATGCTCAGCCGACACGAGTGGTAGTATCTACAAGACCAAAACTCAAGGAGAGATTAACCAAGTGGCATGATCGAAAAAAGGAACTTGAGACCATGATAAGTTCAAGGACAAGGAAAGGAGTTGGATTGCGAAGATCAACGCCGAGGCGAAAGGCAGCAGAAAGGCGAGCAGAAGTGGATTTGGTGGAGGAGCTGCGCATAACTTGCAAAGACAGGCTTCCTCGCGAAATCCACCACCAAGGCGAAACACAGCCCTGA</cdnaseq>

Protein Sequence

<aaseq>MATRKRLAGAALVCLSLFLLSRALLFSQDDPEPVKRPDEASSISLPPDRIAIIAAAPAPSPATAAASDGSPAPAQDEVRCDLFDGSWVYDPAGYPLYDAGECPFLSDQVTCRRNGRPDSGYEHWRWQPRRCAAALRLRGGEMLEQCRDKRVVLVGDSLNRNMWESLACILYAAAPDRSRATVDDASADHKIFQALDYNCTVEFYWSPFLVDLDDQTRVLKLDSLPATTYRRLAAADVLVFNTGHWWTHTGKFRAWDHLERNGKKVEMGAEEAFNRALRTWTRWLDRNVDSHKTMVFFRSISPEHKNKNWCYNETAPMARAEEYVEAFPRGMVSIVERNVRRARTAVGYLDITRLSELRRDAHPSVFTPSTRKRDVKKLVQEHSPCQPSTLQADAYTTGLSMKEIERRRKIGAANKGKVPWTKGRKLSKEHKELIKRRTTEALRDPKVRKKMLGHRQLHRQASKDKIGAALRKIWERRMVAVKARQEVLRIWSNSIAEAAKYGDYCQDKLDWDSYDRIKSEMISMFLWNKERERIMKKLEKAEAKIVAKKLQAAERSKLXTRGIKKLQHQKLVLRKSDAQPTRVVVSTRPKLKERLTKWHDRKKELETMISSRTRKGVGLRRSTPRRKAAERRAEVDLVEELRITCKDRLPREIHHQGETQP</aaseq>

Gene Sequence

<dnaseqindica>1..407#967..1144#1246..1421#1503..1658#1750..1933#3385..3568#3678..3730#3853..3890#3979..4393#4681..4875#ATGGCCACCCGCAAGCGCCTCGCTGGCGCCGCCCTCGTCTGCCTCTCGCTCTTCCTCCTCTCCCGCGCCCTCCTCTTCTCCCAAGACGACCCGGAGCCCGTCAAGCGACCGGACGAGGCGTCCTCAATCTCATTGCCGCCCGACCGCATTGCCATTATTGCTGCTGCACCTGCGCCGAGCCCAGCTACTGCTGCTGCTTCCGATGGCTCGCCGGCGCCGGCCCAGGATGAAGTCCGGTGCGACCTGTTCGACGGCAGCTGGGTGTACGACCCGGCCGGCTATCCGCTCTACGACGCCGGGGAGTGCCCCTTCTTGAGCGACCAGGTCACCTGCCGGAGGAACGGGCGGCCGGACTCCGGCTACGAGCACTGGCGGTGGCAGCCCAGGCGGTGCGCCGCCGCTCTCAGGTGCGTGGCCACTGCTACCTACCTTGCATCTCTTCTGCCTTTTTGAAATTTCTCTTCATTTTGTTTTAAATCCTGGACAGACAAACTAAAGCTGGTCTCTTTAGTAGATTCTGAATCTGATTTGTTTTTGAAATGCGCATGAATCGTTCATGAATGCTCTCCGTTGTGTGTGTGTATCCCCTGTGACACAGTCGTAATCGATGGCTAAAATGAACAGCCCGTGCAAGTCGCACTGTCTCAGGGCCCGTTCTTGGATACAAAAGGTAAATGAAAAGTGGGTAAAGTTGTCAACTTGTGACGATGTGCGTTGCTTTTGAGTTGGGAACACAGCTCTGACAGTGCCCTGTGCATAGTACTACTAGTGTTATGGCAGTAATTAATTATTTTTCACTTTGAAACACATAGTTGACACTAGTTGCACACATGACAACCAACCACGGTCACTGTTCCTGATTCCTCCGGTGCATCATTCCGACCGGAATAATCGTGTTGATTCTCCATGAGTAATCCTCTGCAAATCGCACACGTCGCACTGAATAATGCTTCACTTTTTTATCAGGCTGCGTGGTGGGGAGATGCTGGAGCAGTGCCGGGACAAGCGAGTGGTGCTCGTCGGCGACTCGCTCAACCGCAACATGTGGGAGTCGCTCGCCTGCATCCTCTACGCCGCGGCGCCCGACCGCTCACGCGCCACCGTCGACGACGCCAGCGCCGACCACAAGATCTTCCAAGCATTGGTAACTAAAGACAAACCAAAAAAAAAACTTTTGCATTTTACTACTACTCATCAGCAAATCAAACCGAAATTCAGTTGAACTTTTTTTGCGATCACGGACAGGATTACAACTGCACGGTGGAGTTCTACTGGAGCCCGTTCCTGGTGGACCTCGACGACCAGACCAGGGTGCTGAAGCTGGACAGCCTCCCGGCGACGACGTATCGCCGGCTCGCCGCCGCCGACGTGCTGGTGTTCAACACGGGCCACTGGTGGACGCACACCGGCAAGTTCAGGGCGTAAGGCTTCTCAGCTCCAGACCTCATCAAAATCATCCGCGTCCATGGCTTGACACAGACTTGACGACTACTGCATTGCAGGTGGGATCACCTGGAGAGGAACGGGAAGAAGGTGGAGATGGGAGCGGAGGAAGCCTTCAACCGCGCGCTCCGGACATGGACGCGGTGGCTCGATCGAAACGTGGACTCTCACAAGACCATGGTGTTCTTCCGCAGCATCTCCCCCGAGCACAAGAAGTTCGTAAACTCGATCGAATTTCAACTGATTATCAGCTTAATTACTTGATCTTAACATTGGAAAACAATGACATGATTGGCATTGGCACAGCAAGAACTGGTGCTACAACGAGACGGCTCCGATGGCGAGGGCGGAGGAGTACGTGGAGGCTTTCCCGAGAGGGATGGTGTCGATCGTGGAGAGGAACGTGAGGAGGGCGAGGACGGCGGTGGGGTACCTGGACATCACCCGGCTGTCGGAGCTCCGGCGAGACGCGCACCCGTCGGTGTTCACGGTCAGGGGAGGGAAGCTGCTGACGCCGGAGCAGAGGCGGCAGCCGGGATCGTACGCCGACTGCAGCCACTGGTGCCTGCCCGGGCTGCCTGACACGTGGAACCTTCTCCTCTTTGCCTCCTGGACCTCGCTTCGATCCTGAGATCATCTCTTCTTCTCCATTGTCGATGCGCCATTGATGCATCATGCATGTATATATAGGATTAATTGTTGCTGAAACTCCTCGTTTTTTGTCTTGTGAATTTTTGTGTGCTGAACGAACTCAACACCACAAAACACGAGCAGTGACGCCGGTGAGCTCCTGTTTCAGCAAATCCGATCCAGTGGGCCGCCTTTGTAGTAGGCCCATCCTCTTGTGGGCCGACAATGTAGCAAGGAGGCCCATCCTCTTGTGGGCCGACAATGTAGCTAGTAGGCCCATCATCTCGTGGGCTTAGACGAGCACACGAACGAGGAGAAGGGATAAGGTCATCGTCCTCTCATCCCCATTCGCACTCGCGCACCTTCTTTCTTGGTCGACGATGTGGCTGCTCTCCTCCTCTCCTCCCTGCTCGCTTCATCCCACATCTCTCCCGCCCTCACTTGATTTGTTCTTTTGTTCTTTTTGAAGCATCTTCCCATCCCAGGTGATTCGAAACAGCAAGAGAGTGCTGCGGTGCAAGGCCGCAAAACCATGGCGGCGGCCGTCCATTGTGCTAGGTAATGCCCATGGCTTTCTAATGTCATCTCTTTTTTTCGCCTATTTTTGTCCAATGTGGTAATGTGGCATAGCTCAGGTGAGCGTTTTCGAGAAATTGGCCCTAATCAATAACGCATCTGGCACTAGAAACAACTCACTCTAAGTCTGTAACATTTTATACTACTTCAGTGCACGATGCCAATATTTCCATCTGCATTAGGAGTTCTGTTCCATTCGAAATTTTGATCCAATACCACATAAATGCAGCTAATAAATCGTAAAACTCATTTGGGTTCCACATTGTATGTGAAGCAATTTATAAATTTATAGAAAGCTTGAAAAAAATGTTTTTTTTTGGGGGTGGGGGTATTTAGCTCATGTTACACTCACAGATAGGAGTATCATGTATTCATGTTGATTGATTAATCTTTTCCCTAGTTTTCCAGTTTACACGGTCCTTACTGCAAGTTAACATTCAATCCTGTAGATCAAAGCTAACATTCACTTCTGTAAATAAAATTTGTATATACAGGGTGGTGCCTTCTATGACCTCTGAGTATGGTGCTGGCTCATCTTCAAGAATCAAATTCTCATACTATAAGTACTGTGCAGCGTTGGAGTTAGTTCTACAACAAAACAGATTTCGAGAACACAATCGATTAATCCACTATCGGGAATTCATTTTGCCGCGGTCATCATTGAAACAAGAAGCTTACAAACATTTGGTCCATGACATGGATGAACACTGTTCCCATCATTCCTCTTGCTTACAGCCATCGACAAGAAAGAGGGATGTGAAGAAGCTAGTGCAAGAACATTCACCTTGTCAGCCATCAACTCTACAGGCTGATGCTTATACTACTGGTTTGTCGATGAAGGAAATTGAAAGAAGACGGAAGATTGGTGCAGCGAACAAGGGAAAGGTTCCCTGGACAAAGGGGAGGAAACTAAGCAAAGGTATGACCAAGCTCTTTCTGTCCTTTTTGCCTCAGTACATTTAACATTAGAATGAGTGGATACGCAGTCTCTTATTACAATACAATGAGAGTCTCTCATTCACCTGTAGAGCACAAGGAACTCATCAAGCGAAGGACTACCGAGGCTCTTAGAGATCCCAAGGTGATGTCATGTAAGAAACCTTCACATGACACTTGTATCTGCCAAAGGCCTACTTGGCTATGGACTGTGAATTTTCTACATAAATTCAATTCAAGTTATTTTGTTTTCTTTAATATTCCCAGGTTAGGAAGAAAATGCTAGGACATCGACAATTGCATAGGTAAATGCGTGTTTCTGCTACCTAGATGGATGCATATAAAACATGTCTATGCATACTCTGAAGCAATCGATGGCTGATCCTGTTTCAGACAAGCAAGCAAAGACAAAATAGGTGCTGCATTGAGAAAGATCTGGGAGAGGCGAATGGTGGCTGTCAAAGCAAGACAGGAGGTTCTTCGCATATGGTCAAATAGCATTGCAGAAGCAGCAAAATATGGTGACTACTGCCAAGATAAACTGGATTGGGATAGCTATGACAGGATAAAGTCTGAGATGATATCCATGTTCCTATGGAATAAAGAGAGGGAAAGAATAATGAAGAAGCTTGAAAAGGCAGAGGCGAAAATTGTAGCCAAGAAGCTTCAGGCAGCAGAGAGAAGTAAACTACNAACTAGAGGGATAAAGAAGCTGCAACATCAGAAGTTGGTTCTGCGAAAATCAGATGCTCAGCCGACACGAGTGGTAGTATCTACAAGACCAAAACTCAAGGAGAGATTAACCAAGGTAACGGCCATGCCCTAAAATTGATTGCACTGCATGAACAAGCCCACATATGCAGAAATTTGCATCCTATTGCTAATATTTGTGCTACTCTTCTTCGCATAGCTAAGGCAACAATTTGGGCACTAGTGTCATAATAATTCAAAGCAATATCGTTCCCAAATAAAGTCCCAGATGTGGTTCCCATTCACTGTTTTGACTTTGTTTCTTGCAATCTTCCACATGCTTTAATATGCTGCTACCTGAATTGACATTAACTTGAAGTACTTATTCTGTCTTCATGGCTAAAGTGGCATGATCGAAAAAAGGAACTTGAGACCATGATAAGTTCAAGGACAAGGAAAGGAGTTGGATTGCGAAGATCAACGCCGAGGCGAAAGGCAGCAGAAAGGCGAGCAGAAGTGGATTTGGTGGAGGAGCTGCGCATAACTTGCAAAGACAGGCTTCCTCGCGAAATCCACCACCAAGGCGAAACACAGCCCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA017466