BGIOSGA017474

From RiceWiki
Revision as of 02:19, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA017474| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA017474, complete gene.| tag = OSJNBA0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA017474

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA017474, complete gene.

LocusTag

OSJNBA0009C07.11

Ensembl Transcript ID

BGIOSGA017474-TA

Ensembl Protein ID

BGIOSGA017474-PA

Length

1866

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:30520598..30522463

Sequence Coding Region

30522302..30522463,30520807..30520994,30520598..30520691

Genome Context

<gbrowseImage1> name=IndicaChromosome05:30520598..30522463 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:30520598..30522463 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCACGGGTAGCGCTGCGCCGCGCGTTCTCGGCGGCGGTGGCGGCCTCGCCGTCTCCGGGTCTGGGTGCGACGGCTTCACCGGTAGGGTTTCAGCACGGACCCCTCCTCCGGCGCCTCATCAACTCTGATGCATCTGCTGCCCTAAAGAACAACAAGCATGGCTTTTCTTCAGAATCTAGGGATGCTCGAATGGATATCAAGAGGCGTTGTGAGCTGAAGGAACATGAATTTTTCCATCTAGTTGAAGAGGCCTTGAAAACCGCTGATCCAGTAAAGGCACGCCTTGTTTTTGAGAAGAGAAAAGAGTTATCTGACCTGGTTCGTGAGTACAAGGCCAACTCAGGGCTCAAGACAGCAAACAGACGTTTGAACTTGGCTGTGATTATTTCAGCCGTTGTTTCAGGCTACTTCGTTGCCGGCATGATCGCGTCGAATTGA</cdnaseq>

Protein Sequence

<aaseq>MAARVALRRAFSAAVAASPSPGLGATASPVGFQHGPLLRRLINSDASAALKNNKHGFSSESRDARMDIKRRCELKEHEFFHLVEEALKTADPVKARLVFEKRKELSDLVREYKANSGLKTANRRLNLAVIISAVVSGYFVAGMIASN</aaseq>

Gene Sequence

<dnaseqindica>1..162#1470..1657#1773..1866#ATGGCGGCACGGGTAGCGCTGCGCCGCGCGTTCTCGGCGGCGGTGGCGGCCTCGCCGTCTCCGGGTCTGGGTGCGACGGCTTCACCGGTAGGGTTTCAGCACGGACCCCTCCTCCGGCGCCTCATCAACTCTGATGCATCTGCTGCCCTAAAGAACAACAAGGTACCCCCACTTAATGCATGCTCTATCTGTTACTACAATCCAAACCATGCTTGAAATCCAACTGTAGAGCAATTGGATTGGTAATTTAAATTGGTTGGCTCCTTCCTTGAAAGTACAAATGCATGTAGCTAACTTGTGTGCTTGAAAGAGTGATAGACATGTTAGTAATTTCAATCAGGGCCTAATCTCCTCAAACTAGCTTGCAATGATGATACTGAGAAGGGAGTATTTGCATTTTTAGCAGTAGTGTGTAAGTGTCAACTCTAAACCAGTTAAGTATACAATGTTATTTTCTTTTAGATTGCGTCCTGAATTTTTTGGATAAGAACCTGCCAGAAAATCATGTTCGTCTTAAAAGATTGACAGCCTCATCGTTTGTCATATTTTCTAAATATGCCAAATGGCATATTTGCAAACGAAAATCAATTTGTAAATAAAACTTTTATATATGTGTTCTTAGCGATCTAAAAGCAAAGGCTGAAAAATAAACTTCGATGAAAAAACCCTAAAATCAGCTCCAAATTTAATGTTGAAAATTCAAATTTTAGCTGATAAGCATATGAATATGTCAAACGATGAGGCCCTGAAGTTATCTGGACACAAGATTCCCAAATGAACATTGTTGATTGGTAAATTCATAGAGCCTCCAAAATTACCTTTTCTTCTACTACCAAATTCTGTTTTTCGTAATTTGGTGCATTGAAAATAGGAAACAATTGACCTGTCTTATATATTTCTTAATGCACAATTTCATATCGAGTATCTATCATTCCTTGTTAGCTTCAAGTTTAAATATGGCAGCAGTACATTCGGATGCTTGAACTAGCAGACCTGCACAATGGGATAACAGCTCAGTAAGATTATTTAATTCCTCTAAGGTGGCACTTCCAACATGTCTTTAAATTTTTCATCACCTGGCAACATGACAGAATCGTATTTGGATGCTTTATTTGATCAGCCCCCCTCCTCCTTGTAAAGCCTTGCACCTGATGGCAGATATTCACTGGGTAACAGTAAACCATGCCATTAGATAGGCTGTGTACTGTATAGTCACCGAGCAGATTACTCTTCCTTGTGTGTAGAACTTTTGTACCTCTGGTGTGTCAGCCAGTATGTATGCAGTCAGACCCTACCATCTAGGGCCTAGGGGTGCGCAAAAGAGCTGTCACACACAGTGATTTGCTTGACTCACATGCTTGTATATTGATTATCTGTTTTTTTGGGCTTAGCTTGGTATGATGCATAGTTTATGTATCGAACGCGAAGGCCAATGGAATGTTAACATAATCTACCATGTTATTCCGCAGCATGGCTTTTCTTCAGAATCTAGGGATGCTCGAATGGATATCAAGAGGCGTTGTGAGCTGAAGGAACATGAATTTTTCCATCTAGTTGAAGAGGCCTTGAAAACCGCTGATCCAGTAAAGGCACGCCTTGTTTTTGAGAAGAGAAAAGAGTTATCTGACCTGGTTCGTGAGTACAAGGCCAACTCAGGGTATATATACATATTCCAACTATCTATATACTTTGATAACGTCTCCTCTATGATATATATGCTGACTATATTCATTTTGCTGCCCCTGCCTTTATGTGACATATAACAACTTAAGGCTCAAGACAGCAAACAGACGTTTGAACTTGGCTGTGATTATTTCAGCCGTTGTTTCAGGCTACTTCGTTGCCGGCATGATCGCGTCGAATTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA017474