BGIOSGA017493

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Revision as of 02:19, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA017493| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA017493, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA017493

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA017493, complete gene.

LocusTag

OSJNBA0017N18.5

Ensembl Transcript ID

BGIOSGA017493-TA

Ensembl Protein ID

BGIOSGA017493-PA

Length

4455

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:30163449..30167903

Sequence Coding Region

30167604..30167903,30167410..30167499,30167092..30167151,30166938..30167003,30166120..30166185
,30165952..30166027,30165737..30165801,30165565..30165657,30165293..30165373
,30165130..30165214,30164585..30164631,30164423..30164485,30164284..30164343
,30164065..30164130,30163927..30163986,30163699..30163813,30163449..30163561

Genome Context

<gbrowseImage1> name=IndicaChromosome05:30163449..30167903 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:30163449..30167903 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAGCTTCCGCGGCGAGGAGAGCGGCGGCGAGGATGGGGGGCGGACGGCGTCGGCGTCGGACCTGCGGAAGCCGTTCCTCCACACGGGGAGCTGGTACAAGATGTCGTCGGCGGGCGGCGGCGGCGGGATGGGGTCGCGCCTCGGCTCCTCCGCCTACTCCCTCCGCGACTCCTCCGTCTCCGCCGTCCTCTGCACCCTCATCGTCGCCCTCGGCCCCATCCAGTTCGGCTTCACCTGCGGCTTCTCCTCGCCCACCCAGGACGCCATCATCTCCGACCTCGGCCTCACCCTCTCCGAGTTCTCGCTGTTCGGGTCGCTGTCGAACGTCGGGGCAATGGTGGGCGCCATCGCCAGCGGCCAGATCGCCGAGTACATCGGCCGCAAGGGGTCTCTCATGATCGCGGCAATTCCTAACATTATTGGGTGGCTCGCAATATCTTTTGCAAAGGACTCATCCTTTTTGTTTATGGGCCGATTGCTGGAAGGATTTGGGGTCGGCGTGATATCCTATGTGGTGCCAGTTTATATAGCAGAAATTGCTCCACAAACAATGAGAGGAGCTCTTGGTTCAGTCAATCAGCTTTCTGTTACTATTGGCATATTGCTTGCCTACTTGTTAGGCATGTTTGTTCCCTGGAGAATTCTCTCCGTTCTCGGTATTTTACCATGTTCAATTCTGATACCTGGATTGTTCTTTATCCCTGAATCACCAAGGTGGCTGGCAAAAATGGGAAAGATGGAGGATTTTGAATCCTCGCTGCAAGTATTGCGAGGATTTGAAACAGACATCGCTGTAGAAGTAAATGAAATAAAGAGATCAGTTCAATCATCACGGAGGAGGACGACAATACGATTTGCAGATATCAAGCAGAAGAGATATAGTGTACCTCTAATGATAGGAATTGGTCTCCTTGTACTGCAGCAGTTAAGTGGTGTGAATGGCATTCTATTTTATGCTGCTAGTATCTTCAAAGCCGCCGGTCTTACGAATAGTAATCTAGCAACATTTGGTCTGGGGGTTGTTCAGGTGGTTGCTACTGGAGTGACAACTTGGTTGACTGACAAAGCTGGTCGACGACTCCTCCTCATTATCTCTACTACAGGGATGACCATTACTCTTGTTGTTGTTTCTGTGTCATTTTTTGTGAAGGACAACATAACTAATGGTTCTCATTTATACTCTGTAATGAGTATGCTTTCGCTGGTCGGGCTTGTGGCATTTGTGATTTCATTTTCTCTTGGTTTGGGAGCCATACCATGGATCATAATGTCTGAGATTCTTCCTGTAAATATCAAGAGCCTTGCTGGAAGCGTTGCAACCCTTGCAAACTGGTTGACGGCTTGGCTCATTACGATGACAGCAAGCTTGATGTTAAGCTGGAGCAATGGAGGAACATTTGCTATCTATGCTGCTGTGTGTGCCGGGACCCTCGTTTTCGTATGCCTGTGGGTGCCGGAGACTAAAGGAAGAACACTTGAGGAAATTGCATTTTCTTTCCGGTGA</cdnaseq>

Protein Sequence

<aaseq>MSFRGEESGGEDGGRTASASDLRKPFLHTGSWYKMSSAGGGGGMGSRLGSSAYSLRDSSVSAVLCTLIVALGPIQFGFTCGFSSPTQDAIISDLGLTLSEFSLFGSLSNVGAMVGAIASGQIAEYIGRKGSLMIAAIPNIIGWLAISFAKDSSFLFMGRLLEGFGVGVISYVVPVYIAEIAPQTMRGALGSVNQLSVTIGILLAYLLGMFVPWRILSVLGILPCSILIPGLFFIPESPRWLAKMGKMEDFESSLQVLRGFETDIAVEVNEIKRSVQSSRRRTTIRFADIKQKRYSVPLMIGIGLLVLQQLSGVNGILFYAASIFKAAGLTNSNLATFGLGVVQVVATGVTTWLTDKAGRRLLLIISTTGMTITLVVVSVSFFVKDNITNGSHLYSVMSMLSLVGLVAFVISFSLGLGAIPWIIMSEILPVNIKSLAGSVATLANWLTAWLITMTASLMLSWSNGGTFAIYAAVCAGTLVFVCLWVPETKGRTLEEIAFSFR</aaseq>

Gene Sequence

<dnaseqindica>1..300#405..494#753..812#901..966#1719..1784#1877..1952#2103..2167#2247..2339#2531..2611#2690..2774#3273..3319#3419..3481#3561..3620#3774..3839#3918..3977#4091..4205#4343..4455#ATGAGCTTCCGCGGCGAGGAGAGCGGCGGCGAGGATGGGGGGCGGACGGCGTCGGCGTCGGACCTGCGGAAGCCGTTCCTCCACACGGGGAGCTGGTACAAGATGTCGTCGGCGGGCGGCGGCGGCGGGATGGGGTCGCGCCTCGGCTCCTCCGCCTACTCCCTCCGCGACTCCTCCGTCTCCGCCGTCCTCTGCACCCTCATCGTCGCCCTCGGCCCCATCCAGTTCGGCTTCACCTGCGGCTTCTCCTCGCCCACCCAGGACGCCATCATCTCCGACCTCGGCCTCACCCTCTCCGAGGTGAGGCAAGCTCTCTCTCTTCTCTTGGAGTATCATGCTTATGCCTAATTAATCTTATCGGATTTGCGTTTAATTGCTCTGTCTCTTCTCTGCTCGCGCTGCAGTTCTCGCTGTTCGGGTCGCTGTCGAACGTCGGGGCAATGGTGGGCGCCATCGCCAGCGGCCAGATCGCCGAGTACATCGGCCGCAAGGGGGTGAGCCTCCGCTGTCCCTTGCTCTTGACACTTGTCTAGATCACGACATTTTTGCGGTTACTGTTTAGCGTTTTCCATATGAACGGAGAAACCGGATCGTGATTTTCAGTCTCGATGGTAGCAGGGGAGTGAAAAGCGGTCGCTTTGTTTGTGAGAATCTGCAAAGAAAAAAAAAAGAGCTGCTTGTGATAATGTTCGGATGAAAAATGGAATTTCACTAGAGTGCTGATTGATGTGCTCTTTGGGTTGATCTTGCAGTCTCTCATGATCGCGGCAATTCCTAACATTATTGGGTGGCTCGCAATATCTTTTGCAAAGGTAAGGTTTTCATGCTCGAGCTGTTACCAGTTAGTTTGATCCGCCCAATGCCAATAGCTTGCGCAACTTCTGAAATTGGTTTATCCAGGACTCATCCTTTTTGTTTATGGGCCGATTGCTGGAAGGATTTGGGGTCGGCGTGATATCCTATGTGGTGAGCAGCTCTTCTTCTCCCTCAAATTACTCTCAACGGATAAGCATTTGTTTTTTCATTCTGGCGTCCTAATGTTTTTCAACTATTCATTCAGGAATTGTAAAACTGTTACCTTCAGATCAAATGATGATATTGTGCTGAGATGCTTTTATTATTAAAAATCTCATATTATTTACTCTTTACATGTTCATGCCAAAGTAACACATCCAAGCCCAACACATGGGAAATGAAACAGTAGAGTCTACTGGAAGTGTCGTAAGCCACATAAGTACCACAGAACTAAACCAAATAATAGGTGTACTTATATGTGAAATTAAGGAAATAAAAGTGTGGAATTAAATATTATTTTGAGGATTTCCCATATCTTAAACATGGTTCCACTCTATTTGTGATTATAGAAGAAAAATATAAATCAACCTAACTCCTTCGTTCTGTGCTATACAGACATGAGTCGAAATTGACCAGAATATAAATCAACATGCCTATAGGAGTGACCATAATATTGTTGTGTGTGGTGAGGTGTGTTATAGATCATTCTCTCATATTAGATATTGAATCTGGGAATTATATACTAATTATGCAATATATTGAACTTCAGTATTTGCCTTGCATGAAAACAACATAGCTAGTAGTACTTCAACTTGTTTTATGTTTTCCAGACTAAGCATCCACTGTTCAACAACACCTTTTTGTTTAAAGAGATATTTTGGCTTTAAAGTATTCTGATTAAAACCTTTGTTTCATGGTCTCAGGTGCCAGTTTATATAGCAGAAATTGCTCCACAAACAATGAGAGGAGCTCTTGGTTCAGTCAATCAGGTCATATTTTGAACAAGAGACAATATCAATCTATTTTCGCTAGTCTGTGCTTTTGTTGCAGGTTTTAACCCTGTTCATAATTTGTTTTTCAGCTTTCTGTTACTATTGGCATATTGCTTGCCTACTTGTTAGGCATGTTTGTTCCCTGGAGAATTCTCTCCGTTCTCGGTAAGCTAGATAAATTATCATGTATTATTGTGTTCAGCTGTCGGCTTATTATGATAGAAAGTGCGTATGCATATCAGTCTGGCTAAGTTGTTAGGTTCGTTGATACAAAATATTGCCTTAAATCTTTACTGTTACTTTTACGTTTCTTAGGTATTTTACCATGTTCAATTCTGATACCTGGATTGTTCTTTATCCCTGAATCACCAAGGTGGCTGGTGAGTGTTGCCCTATATTGCTTTTTTTTTTTTGTTAACAGTTACAGCAGGATCTAAATAGAACAGATTATAATGTTAGGCAAAAATGGGAAAGATGGAGGATTTTGAATCCTCGCTGCAAGTATTGCGAGGATTTGAAACAGACATCGCTGTAGAAGTAAATGAAATAAAGGTAACCATCTGTACCAGGCTTCATTTTATTGTAGTTAAGTGATATGCACCTGGTGCGGACATTTTTATTCTTTATGTTGCACCTGTCAATTACCTCAACCAATACGGACTGTGGGGAATTTATCCTATTTCTGTGTGGCAATGTAACATAAGGAAATGTGATTTATAAATTTTTACACATTTTCTACATAGAGATCAGTTCAATCATCACGGAGGAGGACGACAATACGATTTGCAGATATCAAGCAGAAGAGATATAGTGTACCTCTAATGGTTGGTTGCTTCCAATTATATATTTTTTCTCTGATACCTTATTGTTCCTTTTTTTGCTTACTGTTTTTATCTCTTCAGATAGGAATTGGTCTCCTTGTACTGCAGCAGTTAAGTGGTGTGAATGGCATTCTATTTTATGCTGCTAGTATCTTCAAAGCCGCCGGTATGTTCTGGAGGATATAATGAGACTTCGTTTTAAGAAATGACATGCTTGTACGTGCTAGTTTAGGACACATACCTCAGGACTCTGTGACAAGTGAATGTGTGATAAAAACAAATGTCAAAATCGATTATTGCCAAGGCTCTGCTCTGCTCTGTCATTGCTCTGGATTTTCCAAAGATATTTTTTAGAAAAAAAAATAATAACTAGTTGAACAATCTTTATTGAGCTTTAATAATAAAATACTCGTGGAGTTAGCAAGACTTGCACTGTGCATCTGAACAGGACATTAATTGAAAACCAGCCATAAGTCTTCCGCTTATATAATACCAGTTTAATTTGGATATTTGGAGCTCCTGAGGCAAATGCAAAGCTACCATTTGTTATGTGATTTATGTTTGCATGATGCTCCTATCACAATATTTTACTTTAATACCACAAAAATGGCAGTAGCTTAGAACTTTGTTAAGCATGATATCTTACAAAATTCTTCCTATACAGGTCTTACGAATAGTAATCTAGCAACATTTGGTCTGGGGGTTGTTCAGGTATGCTTTTCCTATGAGTTAAATCCATGTCTCATTTATCAACTTTGTACAAATGTGGACATTCTATTTCATATACTTAACAAAATCTAACCATGTTAGGTGGTTGCTACTGGAGTGACAACTTGGTTGACTGACAAAGCTGGTCGACGACTCCTCCTCATTGTTAGTTGCATCCCCATTAATTTTCAGGCATGCTACTTTCGAAGAATATATAATTTATTTATTTTTATTTTTTTTCCAGATCTCTACTACAGGGATGACCATTACTCTTGTTGTTGTTTCTGTGTCATTTTTTGTGAAGGTATTGTCATTTTGCCACTTAAAAAATTTATTTGGTACTATATTTAATGTTTTGTATTTCGCTGCTTGTCTAGTTTCGTTCAATTAAATCTTGATTGTGTTACCTGATATTATATTCCCTTTGTAACATATTTTACTATCGATCATGAAACAGGACAACATAACTAATGGTTCTCATTTATACTCTGTAATGAGTATGCTTTCGCTGGTCGGGCTTGTGGTTAGTTGAAGTTCTATGTGCATCTCTCTTTTCTCATTGTTGGCAGAAGCGCTTATTGCCTTCTATGTTATATCACAGGCATTTGTGATTTCATTTTCTCTTGGTTTGGGAGCCATACCATGGATCATAATGTCTGAGGTATTGTATAATCCTTCCTGCTAATATTAGCTGAGATTATTACTGAAGGCCTAGAGCAAATTTATTGTTGAATTTGACTGGGAGATTGATGTATTTGCCTTGCATGCCTTCAGATTCTTCCTGTAAATATCAAGAGCCTTGCTGGAAGCGTTGCAACCCTTGCAAACTGGTTGACGGCTTGGCTCATTACGATGACAGCAAGCTTGATGTTAAGCTGGAGCAATGGAGGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTGCATGACGCATGCACACATACACACAATCGAATGCATGGAAAATGCAAGCTTTTCCTTCCAGGCTCATGTCACTATGTATGCTCTTTTTTTTTTTCAGGAACATTTGCTATCTATGCTGCTGTGTGTGCCGGGACCCTCGTTTTCGTATGCCTGTGGGTGCCGGAGACTAAAGGAAGAACACTTGAGGAAATTGCATTTTCTTTCCGGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA017493