Os11g0639000

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Revision as of 09:17, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0639000| Description = Conserved hypothetical protein| Version = NM_001074873.2 GI:297612253 GeneID:4350992| Length = 4654 bp| Definition ...")
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Gene Name

Os11g0639000

Description

Conserved hypothetical protein

Version

NM_001074873.2 GI:297612253 GeneID:4350992

Length

4654 bp

Definition

Oryza sativa Japonica Group Os11g0639000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:27100514..27105167

Sequence Coding Region

27100578..27100636,27101025..27101092,27102043..27102124,27102233..27102404

Expression

GEO Profiles:Os11g0639000

Genome Context

<gbrowseImage1> name=NC_008404:27100514..27105167 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:27100514..27105167 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgtcgtcgctggggaggctcaaatcctccatctttgacaaggaggagaggaagatgcaataccaatcgcacattcgggggcttaatgcgtatgatcgacacaagaagttcatgaaggattatgttcagttttatggccatgacaagaatgtggataatcgtgcacccatcaagactgataaagatacactgcgagaaggatataggttcatactttctgaggaagacgatgtggattctacttgggagaagaggctggtcaaacgttactatgacaagctttttaaagagtatcctttttggtggtgtgttccttacattcttttcattaagggtacagtgtatatttcttcagaaattttctgtaacatgttctga</cdnaseq>

Protein Sequence

<aaseq>MASSLGRLKSSIFDKEERKMQYQSHIRGLNAYDRHKKFMKDYVQ FYGHDKNVDNRAPIKTDKDTLREGYRFILSEEDDVDSTWEKRLVKRYYDKLFKEYPFW WCVPYILFIKGTVYISSEIFCNMF</aaseq>

Gene Sequence

<dnaseqindica>65..123#512..579#1530..1611#1720..1891#gctggggagagagaggagaggagaggagagagaggggaggagaggtagaggaggcgagagctcgatggcgtcgtcgctggggaggctcaaatcctccatctttgacaaggaggagaggaagatgtatttgcttttctgcccaatccccgtcccatctcattctgttcctgcaccaaagtttccccctttctttcggatttgtgtgtggcacgaatcgattagaaacctttgttttttctagcttcacatttcttgacgctgatgctgtcaaagtgtgattttgaaggggtatttctgtgctccgttatgtgttgggggtcagtgcgaataggggaagtgatgatgtcgatgaaccctaactttgttggttgcaatctttgcttcgagataggagttaagttaggctgatttgccactcaagggcaatggaatattagatagatgcactgctttttgttagttcgctcgctttatttttcatctgatggatatggattggttgtggatgcaggcaataccaatcgcacattcgggggcttaatgcgtatgatcgacacaagaagttcatgaaggattatggtatgattctttgctggcttcttttccacctcttaagcatttcttgattgttttaaaattttattgggagatctagggctactttcagttcagatttcattggaacaaaatataatgatagtggaatggtaatgtcatgataatatattacagttaatagcactgttttaggaaaatggcacattttaaagttttgcttctgcctttcttcacaatagtcagacaaatggtggttagcttgcactccgatattctggcacaactcccgttatcccagttcaatttgatttttgattcctgatgccaatgcatggaacggatggatcagaaagttgtcctttcacagtgtaaaggaaattgagacgctggcatataacgagttaattatttgctctgtctcagtttccaaaagcaactggatgacgaacagtcccctctactgtagaaagaattgggggctaccttcatccatacatgggctatgcttattgatatataacttcccacctagctttggatgaaacttattctgggtatgcatcttttccatatgggagttgatggtctgatatgccataccagtgacccaatctgttgaacaatgctgtcattgactagcagttcatcttccaactatactatgaatattatagatcagtttaaaatcattataaaagtcaagtgacttggattctattgcttgtgttagtaaagtacaaggaagcttttgttttagatatgtaagtggaaactactatgataaatgaagaaccagaatgtagcctcaccacagcatcctttatcgtggatgtataaataattgtggattggagatcatgttcatgtttacaaaattattgtttcattgattggctctggcattttattggtatctccctcttttcttgatattataagttcccactgaaaaaacaatgtgctgtgaacagttcagttttatggccatgacaagaatgtggataatcgtgcacccatcaagactgataaagatacactgcgagaaggatataggtaagaaacaagtccaataccctttgttatttatttatggtggaatgtgtgtccatgctttatgaaatactcctaaatccttttctttaattatttatccatataaaggttcatactttctgaggaagacgatgtggattctacttgggagaagaggctggtcaaacgttactatgacaagctttttaaagagtatcctttttggtggtgtgttccttacattcttttcattaagggtacagtgtatatttcttcagaaattttctgtaacatgttctgatttgtggagctgaggtgatttggcaagttcatcccattttattctgagcaatactgcaaatgtattgaagactgaagagcttgatataatagactaattgggtatgaactgtagatattatctcacaaactcattagcgtgtctgaaaagataagagttgcagtataaattgtaagatactatgagtgaaattttctcatcaaagaggtagacataacgcatatgtatatggttattctcataggcataactcgtatttactgttgtccgctgcatcagtatatgtctttgagagaatattgcaagttcgttccaaacaaatatagtgcttaacgggttatttcctaagagaaactatttacatgatatgcataaagtttcttgtatttatgccttaaatagttgggccaatattatctgtcagtcagtctcctatagaaacagcatgttttgaagttctgtagtacctattttagaagatgggaacatgaaggatgagagagaaccaggattgctatgtttgatttgaagcacttaagttctgctcctatctttataatctatctatattaaccaagagatgtagtccttgcaccttgaacttgttttgctggctgttttactgttcttgtaatgttcttgaaacttaaatttattgtgcctaggatccttaatttgatacagatactgcattgctgatatgtcccagtacaaaagaggcaaggtatggtgatacaattctatagcaataagccaatagttgttacagtatttatttgtgtcatttactggatacaatgatctcttgaatgatattcttgctgttttttctcctcattgctattaatgcaatagaaaagacgaaaaatgctcctagtatgatttatatctgtaacattgaggatttcaattaaaagaaagaaaagaataatacgaattgttgatttcgtatccgtaatattaagtttgcgtgagcagcatcgacaaagtgatcattcttgtttttggtcatggagttgcattatagtatcaattattgttgcacagagcagcaaaatcactagcacaaccatacttttatatatgttaatgtctgacaggcacacacttgatagtggggacgctaagaaatcctatttacttggttcgttactgaataatatctaagtatcctttagaatttagaacagcactaacaaggatatgctgctcatagatattagaggttttttttaattgataaaaccatcggttttattcttggaagttgagtgcacattctaaggatctcatttatttcagattggattgagatggagaactgaaaaggaggtgatatctggaaaaggtatttccctttataattccatgtgttttcaggtgcactaaactgtcgcaaaatgctaaatgtagtctatacattttttttttcaaatgtgtgctctgttttactaattttcttattggtagatgtgatattcattacatgttgtcttttgcagggcagtttctctgtggcaacaggatttgtgatgagaaaaatggacttggtagttatgaggtatgctcttggtcctttctatcttgtcactgatgctacaatgcatagatccttttgttcattaaagaactccttttctgctatagataactctcccccttgttttcaggtgaacttttcttatattgaagcaggggagcagaaacaagcactagtgaaactggtagcttgccagaggttagttaatccactacttcattttgggattatgtaacccagttgatccactatttcttttcttgtatttatcttgctgatcttggtattcatacattttgcatcccaactattttgctctggcccatcctctctctagtcttctcttgccatttttgttcaaccaaatattcaattgattattgattgttgtacattatgaaagatgtgcagaaaagcttgcttataagaggcaaaaggagaaggaaagagagaaggaaaaagagatttctcgtgaaaaggaaatggagttaaaagaaagggacaagaggaaaaggtacctcttttccccaatagttctttttcctaactttcttggacatttctgttcaaaccttttaccccaggatttttgttacctgactttcttttacatttctgttgaaactgtagagaacgtgagggaagtgaagaaactgaagatacatcggaggatgaatcaactgagaaatatagtagaagaaaaaaaggtaaaaatgattgcattattacctggaacagtggatcttttttcgtgtttatgaagtcaaacactaccagtatgtagtagtttactttattttcgtcggaatttaaactgtcaaaacttttgtatattattaacaagaaaaattattctatgcaaaatcctgcagatcgcaaacgatcatcaagaaaatcgagcaacaatgatgaaggcttcgaggagttccttgaaggcatgttcccttgatctggcctttatgtcaaaatcatcatcagaaggggaagcggcacctgtttaatcttccatgacatgttaatactgaacgtgattaattgtaactttgtatatgatggtgtattactgctagttgttccatttctagcctctaggtctcttgtgagttctgagatgtgagaactgccaggtgttgtctaactaatgaatttgtcaccacctgctcttaatctgtgatagcttgaagcaccttgaatgttatttatatgtggatattgtgtgttat</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0639000, RefSeq:Os11g0639000