BGIOSGA017498

From RiceWiki
Revision as of 02:19, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA017498| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA017498, complete gene.| tag = OJ1126_...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA017498

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA017498, complete gene.

LocusTag

OJ1126_B10.9

Ensembl Transcript ID

BGIOSGA017498-TA

Ensembl Protein ID

BGIOSGA017498-PA

Length

3081

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:30102842..30105922

Sequence Coding Region

30105616..30105922,30104552..30104673,30103832..30104028,30103507..30103681,30103142..30103276
,30102842..30103051

Genome Context

<gbrowseImage1> name=IndicaChromosome05:30102842..30105922 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:30102842..30105922 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAAGGAGGGCGGCGGCGATGGAGGGTTCGTGCGGGCAGACCAGATCGACCTCAAGAGCCTGGACGAGCAGCTGGAGCGCCACCTGAGCCGCGCGTGGACCATGGAGAAGCGCAAGGAGGAGGCGGCCGCCGACCAGCGTGGCAGCAAGCCGCCCGCGCTCGCCGCCGCGCACTACTCGCAGAACCGCAGGCAGCGGAGGGAGGAGTGGGAGATCGACCCCGCCAAGCTCGTCGTCAGGGGGGTCATCGCCCGCGGCACCTTCGGCACCGTCCACCGCGGCGTCTACGACGGCCACGACGTCGCAGTGAAATTACTTGACTGGGGAGAGGATGGGCATAGGTCCGAACAAGACATCGCAGCACTAAGAGCAGCTTTTTCACAAGAGGTCTCTGTCTGGCATAAGCTGGACCATCCAAATGTTACAAAGTTTATAGGGGCTATAATGGGCGCCAGGGATCTAGATATTCAAACAGAAAGCGGACATCTTGCCATGCCAAGTAATATCTGCTGTGTTGTTGTGGAGTACCTTGCTGGGGGTTCACTAAAAGGATTTCTGATAAAGAATAGGAGAAAGAAGTTAGCTTTTAAAGTTGTGGTTCAGATAGCTCTTGACCTTGCCAGGGGGTTAAGTTATCTTCACTCAAAGAAGATCGTGCACCGTGATGTAAAGACTGAAAATATGCTTCTTGACAAGACAAGAACTGTGAAAATTGCTGATTTTGGTGTTGCTCGGCTTGAGGCTTCAAATCCCAGTGATATGACAGGGGAAACAGGCACCCTTGGTTACATGGCTCCTGAGGTTCTCAACGGCAGTCCATACAACAGGAAATGCGATGTTTATAGCTTTGGGATTTGTTTATGGGAGATATACTGCTGTGATATGCCATATCCAGATTTGAGCTTCTCAGAGGTCACGTCTGCTGTTGTTCGTCAGAATTTAAGGCCTGAGATGCCACGCTGCTGTCCAAGTTCTCTGGCAAACGTGATGAAACGCTGCTGGGATGCGAACCCTGACAAGCGACCTGAGATGGCCGAGGTGGTGTCTATGTTGGAGGCGATCGATACTTCGAAGGGTGGAGGCATGATCCCTGTAGATCAGCGACAAGGATGCCTTTCATGCTTCAGGCAGTACAGGGGTCCGTGA</cdnaseq>

Protein Sequence

<aaseq>MKEGGGDGGFVRADQIDLKSLDEQLERHLSRAWTMEKRKEEAAADQRGSKPPALAAAHYSQNRRQRREEWEIDPAKLVVRGVIARGTFGTVHRGVYDGHDVAVKLLDWGEDGHRSEQDIAALRAAFSQEVSVWHKLDHPNVTKFIGAIMGARDLDIQTESGHLAMPSNICCVVVEYLAGGSLKGFLIKNRRKKLAFKVVVQIALDLARGLSYLHSKKIVHRDVKTENMLLDKTRTVKIADFGVARLEASNPSDMTGETGTLGYMAPEVLNGSPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEMPRCCPSSLANVMKRCWDANPDKRPEMAEVVSMLEAIDTSKGGGMIPVDQRQGCLSCFRQYRGP</aaseq>

Gene Sequence

<dnaseqindica>1..307#1250..1371#1895..2091#2242..2416#2647..2781#2872..3081#ATGAAGGAGGGCGGCGGCGATGGAGGGTTCGTGCGGGCAGACCAGATCGACCTCAAGAGCCTGGACGAGCAGCTGGAGCGCCACCTGAGCCGCGCGTGGACCATGGAGAAGCGCAAGGAGGAGGCGGCCGCCGACCAGCGTGGCAGCAAGCCGCCCGCGCTCGCCGCCGCGCACTACTCGCAGAACCGCAGGCAGCGGAGGGAGGAGTGGGAGATCGACCCCGCCAAGCTCGTCGTCAGGGGGGTCATCGCCCGCGGCACCTTCGGCACCGTCCACCGCGGCGTCTACGACGGCCACGACGTCGCAGGTGCGCCCGCCCGCGCGCGCCATTTCTCCCAGTTTTTTTACTTGATACCAACCACCGCGATATCCATGCACTCGCTTGCGCCCGTACGGTGTTCGACGAAATCGCGCTGCCAATGCGGCGCTGACGGCGAGTGGAACCGCCGGTCACTGTCTTGGCCTCTTGGGTGCTCCTTTTCTTTACCCCTTTTAGCAAATTGCGGGAGTTGATGCCGCTGCCCCTTTTGGCTTTTCATGGTGTTCCCCCGTGACATCGGTTGGATTGGGCGGCTTTTGACGTGCCCTCGCTCATCAGCAGTTCACTTGGCCATGGTTCTTGTGATCCCTGGCTAGGAATTTCATGGTAAAGTTGCTTTGCGGTTCCAAAGAAAGCCGAAAATGTCGACCTTTTAGTATGGAGGGATGTGCAACCTATAAGTTTGTGTACTTTTTCACCAGATTGAGATTATCCATCGATGCAAACACATGACACGGCAACAGCACAAAAAGAATCCCTTTTGATGATTCATCTATCGGACCTGAGCATGTCTATAAGCAATTGGTTGATGATTAGTTGTTGTACATGCATAGTTTATAGGATGTTCACATTCTATTTTTGAGAAACATATTCCCCAGGGATTGTTAGCTATCTTTCGTCCATTCCCCCATATCAGCATGGATTCCATCATTTTGCATTTTTTTTTTTTGGAAAAGCCCATCAATTTAATTCCCCTACAAAAAGTGGATCTTCCTAAGACCGAAATTGTCTTTGTGTGCCCTTACCAAAAGAGAAGGGACAATTTGATGGTGTAATGGTGGTACCCCTGCTCCTCTCCCAACCTTGGCACCTTTGCTTAGATCAATTCTCAAATCTTGTTTTTATTTGACAGTTTCCAATGGGAAATTGTATGTTCTCATTACAAACATCTCTTTTCAAAATAATTCATTGATTCATATTATTCTCCAGTGAAATTACTTGACTGGGGAGAGGATGGGCATAGGTCCGAACAAGACATCGCAGCACTAAGAGCAGCTTTTTCACAAGAGGTCTCTGTCTGGCATAAGCTGGACCATCCAAATGTTACAAAGGTACTATTTATTTCAACAAGTCATGCTTCTTTCAATTATTTTGGGTTAATTACAGTTCCCTCGACCATAAAATGCATGAAATCAGAACAGATTTATACATAACTGGCATACTTATATTTGACTAAATTTCTAAATGCCTAAATGCTTAAATGCCATATCAAGTGCATTCGAATCATATATTTGATCAGTGTCTATGTGTCAATGTGAGTAACACTAGCGTCCTTAACTAAATATTGAAAGTGATGTCTGTGTAGTGGCATTACCAACTGGATAACAGCCTTATCGTCTTATCTACTCTGCTACCTGTGGTATATAATTCATAGCAGCTGTTAAATTGTTCAGCAAAAAAACGAAGTCCTTACATGTATCGAGGTTTGGATTTGTTGCACCAAAATCAAATGACCTAGCATTCGCAGTGCTTGAAGCATATCTTATAATGTCAAAGTATATGTCTTTTCATATTTCTTCTGTTGTCTATCTATTTGTCATGTACCCTAACAACAGGTTGAAATTCTATATACAGTTTATAGGGGCTATAATGGGCGCCAGGGATCTAGATATTCAAACAGAAAGCGGACATCTTGCCATGCCAAGTAATATCTGCTGTGTTGTTGTGGAGTACCTTGCTGGGGGTTCACTAAAAGGATTTCTGATAAAGAATAGGAGAAAGAAGTTAGCTTTTAAAGTTGTGGTTCAGATAGCTCTTGACCTTGCCAGGGGGTAAGCATCAATTTGATCATTTGCCAGTTTTTCTTCTGGGGCTTTTAACTATTTCACTCACTCTTTATCCTTCAAAACTCTAATTGATTGTCCCTCAAAAAAAAAAGCTCTAATTGATTGGAATAGTTTTGACATTTAACTATTCAATAGGTTAAGTTATCTTCACTCAAAGAAGATCGTGCACCGTGATGTAAAGACTGAAAATATGCTTCTTGACAAGACAAGAACTGTGAAAATTGCTGATTTTGGTGTTGCTCGGCTTGAGGCTTCAAATCCCAGTGATATGACAGGGGAAACAGGCACCCTTGGTTACATGGCTCCTGAGGTATCCGATCTTTGACATGGACTGCTCATTGTTTTTTCCTCAGTTTCTTCATTTCCTCTTTGCCACTACTTGTCTAATTGCAGCACATAATTAATTAAGAAAAAATGTCAATTTTTTTTGCATCAAACAGTTGTGTGTACCTCGGTCCTAGGAAGGGTATTTGATATTTATTGTGTATGTAAGTTACTACCTTGCATGTTATATGCCTTATATTGGCATGTGATATGCAGGTTCTCAACGGCAGTCCATACAACAGGAAATGCGATGTTTATAGCTTTGGGATTTGTTTATGGGAGATATACTGCTGTGATATGCCATATCCAGATTTGAGCTTCTCAGAGGTCACGTCTGCTGTTGTTCGTCAGGTAAAACCCTCTTTTCTAGCTGGCTTATTTTCTGCTTTCTGTCTAGCTGCTGATTTGATTTAATGTGTGCTACAATCCTTGTTTGATTAGAATTTAAGGCCTGAGATGCCACGCTGCTGTCCAAGTTCTCTGGCAAACGTGATGAAACGCTGCTGGGATGCGAACCCTGACAAGCGACCTGAGATGGCCGAGGTGGTGTCTATGTTGGAGGCGATCGATACTTCGAAGGGTGGAGGCATGATCCCTGTAGATCAGCGACAAGGATGCCTTTCATGCTTCAGGCAGTACAGGGGTCCGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA017498