BGIOSGA017500

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Revision as of 02:19, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA017500| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA017500, complete gene.| tag = OsI_211...")
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Gene Name

BGIOSGA017500

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA017500, complete gene.

LocusTag

OsI_21109

Ensembl Transcript ID

BGIOSGA017500-TA

Ensembl Protein ID

BGIOSGA017500-PA

Length

4606

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:30091357..30095962

Sequence Coding Region

30095514..30095962,30095076..30095152,30094792..30094861,30094634..30094714,30094237..30094338
,30093656..30093793,30093036..30093101,30092791..30092931,30091623..30091713
,30091357..30091518

Genome Context

<gbrowseImage1> name=IndicaChromosome05:30091357..30095962 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:30091357..30095962 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCTCCTCCAATTCCACCTCCTCCGCTCGCCGTCGCGCCGCGCGCGCTCCGCCTCCTCCTAATTTGGGCGACCTCTCCGGCGTCTCCGCTCCCCTCCCCTCCAAGGGCCTCCACGCCCCCTCAATCTCCACCCACCCTCCCAAAGCGGCAAACCCACATCCCTCGACACCAGGAGCCAGCATCGCCGTCGCCGTCCGCCCCGCAACGCAGCCCGCGAGTCCGGTCTCCGGTGACGCGGGCCCCGAGGCGGAGGCGGAACCTCCACGCGGTGCCCCCCAGGTCCTCGTGCGCCGGCGTTCCGTGCCCTTCTCCCCCGACTCTCCGCTCGCCCCCGGCAGCCGCGGGGGCGGCGAGAGGAGGTCCACGTTCCGGGAGGACGTCAGCCATGCCGCCGCCGAGACGTACCTCGTCACGCGCCTCGCCTTCATCCTCCTCCGATACCTCGGGGTAGGCTACCGGTGGATTTCTCAGCTCGCTGCCCTCATAATATATGCAATTTTACTTATGCCCGGTTTCATAAGAGTTGGGTATTATTATTTCTTTTCAAGACAAGTTTTGAGGAGCGTGATCTATGGGGATCAACCAAGAAATAGGTTGGATCTTTACATACCAAGAGACCCCAAAAAACCCAGTCCAGTTGTTGCATTTGTTACTGGTGGTGCATGGATCATTGGGAATTTTCCTCAAGGAACAATAAGTGACATGGTTAGCGATGCTTCTGATGGGATTTCATTTGTTTGTGAGACTGTTGGTGCCTATGGAGGAGATCCTAATCAGATATACTTAATGGGTCAATCAGCAGGAGCACATATCGCAGCATGCGCTCTTTTGGAACAAGCGGCTAAAGAATCTAGGGGAGAGCAGATTTCATGGAGTGTTACTCAAATAAAAGCATACTTTGGTTTGTCTGGAGGATACAACATTGAAAATTTGGTTGATCATTTCCATGAACGTGGTCTTTACCGTTCAATATTTCTCAGCATAATGGAGGGAAAGAAATCATTGCCACATTTCTCTCCAGAAACTGTTGCCAAGAAATTAAGTCCTGAAACAATAGCTCTTCTTCCTCAGATTGTGCTTTTGCATGGAACGGATGATTATTCTATACCATTTTCTGCTAGTGAAACTTTTGCGGGTGTCCTTAAACAAGCTGGTGCTAAAGCCAAGTTACTACTCTATGAAGGGAAAACACATACTGATGTATTTTTACAGGATCCACTAAGGGGTGGCAGGGACAAACTGGTTGAAGACGTTATTTCTGTTATCCATGCTGATGATGCAGATGCACGTGAGAAGGATGCATTGGCACCTATCCCAGGCCGGCTGGTTTCTGAGTGGCAAATAAAGCTGGCACACCGAATTAGTCCCTTCTGA</cdnaseq>

Protein Sequence

<aaseq>MASSNSTSSARRRAARAPPPPNLGDLSGVSAPLPSKGLHAPSISTHPPKAANPHPSTPGASIAVAVRPATQPASPVSGDAGPEAEAEPPRGAPQVLVRRRSVPFSPDSPLAPGSRGGGERRSTFREDVSHAAAETYLVTRLAFILLRYLGVGYRWISQLAALIIYAILLMPGFIRVGYYYFFSRQVLRSVIYGDQPRNRLDLYIPRDPKKPSPVVAFVTGGAWIIGNFPQGTISDMVSDASDGISFVCETVGAYGGDPNQIYLMGQSAGAHIAACALLEQAAKESRGEQISWSVTQIKAYFGLSGGYNIENLVDHFHERGLYRSIFLSIMEGKKSLPHFSPETVAKKLSPETIALLPQIVLLHGTDDYSIPFSASETFAGVLKQAGAKAKLLLYEGKTHTDVFLQDPLRGGRDKLVEDVISVIHADDADAREKDALAPIPGRLVSEWQIKLAHRISPF</aaseq>

Gene Sequence

<dnaseqindica>1..449#811..887#1102..1171#1249..1329#1625..1726#2170..2307#2862..2927#3032..3172#4250..4340#4445..4606#ATGGCCTCCTCCAATTCCACCTCCTCCGCTCGCCGTCGCGCCGCGCGCGCTCCGCCTCCTCCTAATTTGGGCGACCTCTCCGGCGTCTCCGCTCCCCTCCCCTCCAAGGGCCTCCACGCCCCCTCAATCTCCACCCACCCTCCCAAAGCGGCAAACCCACATCCCTCGACACCAGGAGCCAGCATCGCCGTCGCCGTCCGCCCCGCAACGCAGCCCGCGAGTCCGGTCTCCGGTGACGCGGGCCCCGAGGCGGAGGCGGAACCTCCACGCGGTGCCCCCCAGGTCCTCGTGCGCCGGCGTTCCGTGCCCTTCTCCCCCGACTCTCCGCTCGCCCCCGGCAGCCGCGGGGGCGGCGAGAGGAGGTCCACGTTCCGGGAGGACGTCAGCCATGCCGCCGCCGAGACGTACCTCGTCACGCGCCTCGCCTTCATCCTCCTCCGATACCTCGGGTAACGTAATCTGATACTGTACCGATCGCCATTCGGCAACACGCCCTCGTCGTCTTTGGTCTCACTCCTCCTCACGGACATACCAATAATGACCTATAAGAAATTAGGAAATCCCCATTGTTAAAACAGATTATTGCATCAAAGCACCTTGCATTTTCAACTAATTCACTTGGATGGCAAGCTAACTCTAGCACTGATGAACTGAATTTTATTATCTTGTGAAGTCATGCTTCAAAACGCCTAATATACATTGCGTTATCTTCCCACCAAAATCTCCAAAAAAAAAAAAATCCAAATGCATATACAATATATTTTCATCTTTGCTGTATAGACGTCCCTGATGTTCTTTCTATTTTTCCAGGGTAGGCTACCGGTGGATTTCTCAGCTCGCTGCCCTCATAATATATGCAATTTTACTTATGCCCGGTTTCATAAGAGGTAGATAAAAAAAAGAAAATCATGTTTACCTTTGGCCTCGTTGACCTTACCTTTTATTACAGATTTCTATGTTGAACATGATGGTTAGTCAATGTTATGATTGTACCAATAAGTGTTCTGGCAAATTAGCTCTTCTTGGTTCCCTTTTTACGGAATTGAAAGCATGGCCATGATTGTACATCTACCAACTAATTTATTATTTATTGATTGCCAGTTGGGTATTATTATTTCTTTTCAAGACAAGTTTTGAGGAGCGTGATCTATGGGGATCAACCAAGAAATAGGTATAGAAACTATCTGCTATATAAACGGAAGAATCTGATTTTGGACTTTGCTAGAGACTCAATTTCACACTATACAGGTTGGATCTTTACATACCAAGAGACCCCAAAAAACCCAGTCCAGTTGTTGCATTTGTTACTGGTGGTGCATGGATCATTGGGTGAGTAAAATTCTTCTGATGATGTATTATAAGGGTCTTCTGCCATGATTTGCCCTTTTGATGACCTCAGTTATATCTAGTTACAAGGCGTGGGGTGCTCTTCTTGGAAGGAGGTTAGCAGAGCGAGGAATTATAGTTGCATGCATTGATTACAGGTGCTCATACTTTGCATGGATTCCTCATATATGATTCTTATAATTCTTTTTTGGTAGATTTTTTTTTACTGATAAGAATTTACTGATTGATCGATTTCTTTTTGCTTGCTTGATGATATATAAAAGCATATGTTTTGCAGGAATTTTCCTCAAGGAACAATAAGTGACATGGTTAGCGATGCTTCTGATGGGATTTCATTTGTTTGTGAGACTGTTGGTGCCTATGGAGGAGATCCTAATCAGTAAGTGATACTTTATCAAATCACAACACCCTAATAAAGTTACTACTGAAAAAAAGTTTCATGTATACATGAAGTTTTTCTAAACGGTTTTCTTGAATGAACAATGTACATGATTTGAATGATTATATTTGAAGTCCATGCTGGTGGTTATTGAATGAGGACAAGCACATAGAAGTTTTTTTAAAAGGTTTTCTGGGCATGCTTCTGTTCCGACATAAATTGTGTAAGATATAGAAATATGTGTCTTATTGAATGGAAAGCTAAAATGCACAGTATATGTTATACTTGCATCTAGACTTAACCACATTCATTTCTGGAACTGATGACTGTATTATTCCCATGCATCCTAATAATTTCGTAGTTTTCCATTATTCTTGCTTTGTTTTTTTTTTTACTGATGATTTTAGTGAAAGACTTACCATTCATCGTGTTAAATCCTGCAGGATATACTTAATGGGTCAATCAGCAGGAGCACATATCGCAGCATGCGCTCTTTTGGAACAAGCGGCTAAAGAATCTAGGGGAGAGCAGATTTCATGGAGTGTTACTCAAATAAAAGCATACTTTGGTTTGTCTGGAGGGTGGGATAGCTTTATCATCTAATTTTGATTGATTATATGTCTGTATGGTTATCATCATTATTAAAGAATTGCTTCTCCTGAGTCTTGATTAGTTTTCTATACCATGCACGTTTTGGTCTAATATAAAACACTAAACCTGCTATCATGGCAACATCGCATGATTTCTTTATGTGTTCATTTAAGTGATCTTCTATTGATTCTACTCCTGTGTTAGTCTGATTTTGATTGTGAAGAAAGTCGGATTTCGGCAATTGTTTAGTTTACATGATGATTGACTTATAAACTCCGATGTTGTGAAACTGGGGCTAGTCCTGCTAAAAAGCAATAGATATCTACCATTTGGTGTTTTGAGTGCTTGTTTTAGATTTGTACCTCATGAAGTGTTTTAGTAGCTGAGAAAACATATGGTGCCTTTTAGAATTTTGAACCAACTTCTGCAGTCTCACTTTGGCATTTGGATGCAACAGAATGTGTAATGAGATACTAAATAATCAGAGCTAGTGATTCTATGTTTACATGACATATATTCTCATTGCTCAAATTGCTGTTTGCAGATACAACATTGAAAATTTGGTTGATCATTTCCATGAACGTGGTCTTTACCGTTCAATATTTCTCAGGTAACAGTGTAACTGTACTTTTGATATGGAAGTGTTGCTTCTACTTTCCTTAATTCTTAATTAGAACTATACAAAACTCAGGAACTTATGAAATGCCTTTTCAGCATAATGGAGGGAAAGAAATCATTGCCACATTTCTCTCCAGAAACTGTTGCCAAGAAATTAAGTCCTGAAACAATAGCTCTTCTTCCTCAGATTGTGCTTTTGCATGGAACGGATGATTATTCTATACCATTTTCTGCTAGGTATGATTATATTTTATTTCCAGGGGAATTAATAATTCTCTACTAGGTTTGATTATCTTTTCTGTTATGTTGTTTTGGGGTTCCTCTCTTTTACAAGATATATGCGTCAAATTAAAACATCAAGTTCCATACAAGCTGTCTTTCTGGACATATTATTGTAGGCAAACACTGCCTATTACTTATTAATTTCTCACTTCTATTTTTATATGCTTCTACATTCTGTAGGCGCGTGTTTGGTTTTGGGACTATGTGGGATGGGATGACACAATCCCTGATTTTAGGGATGGAGTGATCCTACTTGCTTGTTTGGTTTATAGGATGGAATGATCCCAATTTTTTGTTTGGTAGAAGGGATGGGGTAGGGATGTGATGAACAGCGTTTGCACCACGTTACTCCCAGCGAGAAAAGGTCTCGCAGCTCGCAGCTTGCAGAGGAAGGAGCGGTGATCGGCGGCGCGGGCGGAAGGAGGAGCGGCGCGACATCGGAGACAATGACGATGTGGACGTGGTGGCCAGAGCTAGAGGCATCGGTCCACGGCGACGAGGTCGGAGGCGCGGCTGGTTCCGGCAAGCCCCGACCTCAAGGAGGCCAGATCCGGTGGCCCCCGACCTCTAGGCAACCTGATTCGGCAGCGCGGATGTGACGAGGAGGTCGGGGGGGGGGGGGGGGTGCGTGGCTTGGACCGGCCTCCAGGCAGAGGAGGAGGTCAGGGCGCGTGGTGACAGCCCGCCATCGCCGCCAGCTATAGCTGCTCCCGATGGCGATACACACGATGCGCGGTGAAGTGGCGCAACTCACGCTGTGCGCTCGTCCTAGGTGGGACAAGCTCATCCGACCGATTTTGCTGGATGGCTTGGTCCCGGATCTAAGAGGAATATTCCTCTCCATGGACCTACCCCTCACTCACCACTAAACCAAACACCCCTAAAAGTGGGTTTGCCCTATCCCATCCTTGCAACCAAACACTACCTAGGTGTTACACCGTTATTTGATCCATCTTTCTATACAAGTTAATCCATTCATGTTGTATGTTCAAGCTGCTAAGAACTCTTTAACTCCGTATATCACATATGCAGTGAAACTTTTGCGGGTGTCCTTAAACAAGCTGGTGCTAAAGCCAAGTTACTACTCTATGAAGGGAAAACACATACTGATGTATTTTTACAGGTTAGTCATTTTGAATATGAAGGCTGGAATAGTTACACCAGGATTCAGGATGGCCCTCTGTGCACAAATTTGCTGGGGAACCCTAACATATCGTTCCGTTGTAGGATCCACTAAGGGGTGGCAGGGACAAACTGGTTGAAGACGTTATTTCTGTTATCCATGCTGATGATGCAGATGCACGTGAGAAGGATGCATTGGCACCTATCCCAGGCCGGCTGGTTTCTGAGTGGCAAATAAAGCTGGCACACCGAATTAGTCCCTTCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA017500

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