BGIOSGA017511

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Revision as of 02:20, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA017511| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA017511, complete gene.| tag = OsI_210...")
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Gene Name

BGIOSGA017511

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA017511, complete gene.

LocusTag

OsI_21092

Ensembl Transcript ID

BGIOSGA017511-TA

Ensembl Protein ID

BGIOSGA017511-PA

Length

3271

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:30004989..30008259

Sequence Coding Region

30006604..30008259,30005594..30006511,30005353..30005511,30004989..30005273

Genome Context

<gbrowseImage1> name=IndicaChromosome05:30004989..30008259 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:30004989..30008259 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCTGAATTTGAGGTACTGGAAGTTCAATTTCATTTTAATGGGGAATTTGTTCTTGATGAGTCAAAGATGTCGTATTGCAATGGGGATTGTGGAGTGTCCCACATAGAGAAGGACAAGATCTCTATCCCTGAACTTGAAGGCCACCTATTGGATCACACAACTTTTCCTCAATCTGTTAGGATGTACTGGTTGCCATTTGGTGCAGAATGGAATAGTGGTATGAGGTTACTTGTAGATGACAAGTCATGTTTGGACATGATTCATGAGCTGGGAACTGCTACAACAGTAGATATATACACCGAATCAGTTGATATGGGTGGGAATGAAGAATCTGGAACACAGTATGCAGATGAGGATGTATTTGCCCTATTTCAAGATGATAATATCATGGATTTGGATCATGCAGAACCTATTGTCAAGGAACAAATTGTCCAAAATAGGGACAAATTTGTTCAGGGCGATAACATGCTGTGTTTGGAAGGTCCAACCCATGGTCAGGATAGTCCGAATGAAGAAGCAGCAGAAGATTTAGAAGCAGAGAGTGATGGCTGTGATGCTACAGGTTTCACAAGTGATGAAGATGATGAAGTTAGAGAGATAAGAACCAAATACAAAGAGTTTATGTCAGAAGTAAAGAAGAGAGGAGATATTCCAATAGACAATCCAATTGAGGTTGATGGCATACAAGGTGGAGATATTCCATTGGGTAATAATCAGGTCTTAGAAGGTGGAGATGGTGCTGAATACTTTGATTCAGATGGTGATGCATCGTACGATGAGGACAGTGATGGTGTCTTTACAAGAAGGAAGTGCAGGTTCCCAATATTTGACAGTTTCGCTGATACTCCACAGTTTGCAGTTGACATGTGCTTTAGAGGAAAGGACCAATTGAAGGATGCTATAGAGAGGTATGCTCTGAAGAAGAAGATAAATATCAGATATGTGAAGAATGAGCAGAAAAGGATTAGGGCTGTTTGTAGGTGGAAAGGTTGTCCTTGGCTTCTATATGCTTCCCATAACTCAAGGAGTGATTGGTTTCAGATTGTAACTTATAATCCCAACCATGCTTGTTGTCCTGAGCTTAAAAATAAAAGGTTATCTACAAGAAGGATATGTGATAGGTATGAGAGTACTATCAAGGCTAATCCATCTTGGAAGGCTAGAGAAATGAAGGAGACAGTACAAGAGGACATGGGAGTGGATGTGTCAATCACAATGATTAAGAGAGCAAAGGCACATGTAATGAAGAAAATAATGGATACTCAGATTGGTGAGTATTCCAAGCTGTTTGACTATGCTCTGGAGTTGCAGCGTAGTAATCCTGGAACTAGTGTGCATGTTGCCCTTGACCCAGAGGAAGAGGACCATGTGTTTCAGAGGTTTTATGTATGTTTTGATGCATGTAGAAGAGGATTTTTAGAAGGATGTAGGAGGATAATTGGGCTTGATGGATGTTTCCTTAAGGGGCCATTGAAAGGTGAGTTGTTATCAGCTATTGGCAGGGATGCAAATAATCAGCTTTATCCAATTGCATGGGCTGTTGTGGAATATGAGAATAAAGACTCGTGGAATTGGTTTCTTGGGCATCTTCAGAAAGACATCAACATACCTGTTGGAGCAGCAGGCTGGGTGTTTATAACAGACCAACAGAAGGGGCTGCTAAGCATAGTATCTACATTGTTTCCATTTGCTGAGCATAGGATGTGTGCACGCCACATATATGCCAATTGGAGAAAGAAACATAGGCTGCAGGAGTACCAAAAGAGGTTTTGGAAGATTGCAAAAGCACCTAATGAGCAGTTGTTTAACCATTACAAGAGAAAGCTTGCTGCAAAAACTCCTCGTGGATGGCAGGATTTGGAGAAAACAAATCCTATTCATTGGTCTCGAGCTTGGTTCAGACTTGGATCAAATTGTGAATCAGTTGACAACAACATGAGTGAATCATTCAATAGTTGGATTATAGAATCAAGGTTCAAGCCTATTATTACTATGCTGGAGGACATTAGGATCCAGGTGACTAGAAGAATCCAAGAAAATAGGAGTAACAGTGAGAGGTGGACTATGACAGTGTGTCCTAACATTATTAGGAAATTCAATAAGATTAGGCATAGGACACAGTTTTGTCATGTCTTGTGGAATGGTGATGCTGGATTTGAAGTGAGAGACAAAAAATGGAGGTTCACAGTAGACCTGACAAGCAAGACATGCTCCTGTAGGTACTGGCAAGTCTCTGGGATTCCATGCCAACATGCTTGTGCTGCCCTATTCAAAATGGCACAAGAGCCTAACAATTGCATACATGAGTGCTTCTCACTTGAGAGATATAAGAAGACATACCAACATGTACTGCAGCCAGTGGAACATGAGTCGGCTTGGCCTGTGTCTCCGAATCCCAAACCATTGCCTCCTAGAGTAAAAAAGATGCCAGGCCGACCAAAGAAAAATAGGAGAAAAGACCCTTCAGAGCCAGTGAAATCTGGAACCAAGTCATCAAAAGTTGGTACTAAAATTAGATGTCGTCGCTGTGGAAATTATGGTCACAACTCGAGGACATGCTGTGTGAAAATGCAGCAAGAACACGCTGAGTCATATAATCCTCCCGCCACCAATGCAAGTCACTCAAGCCCATTGCAAATTGAACCTGCACAGTCGAAGCAAACTAAAGGAAAATCCATAGCGACATCATCAAGTAAGAGTAAGATGCCTGAGGGTTCATCATTTATACAGTCTGGCCATAAGAGAAGACTGGTATCTTTTGGAGAGAGTGCTCAAGCATCTGCGAAGTCAAGTGCTCAAGCATCGGCGAAGGCATCTGCTGGAGGGAGTGCTTCTGTTGTCATTGAAACCAATGCTGGGACTGCTAGCTCATTTGCAAAGGCAACAATCAATGTAAAAGGTGGGCATGCCTCTGCAAAAATCCATTCAACTTCACTTGGTCGTGGATCAGTATCTGCCCAAAGCAGCTCATCACAGAAAAATGGGCTGCTGAATTCCAAGAACAAGATGATGTAG</cdnaseq>

Protein Sequence

<aaseq>MSEFEVLEVQFHFNGEFVLDESKMSYCNGDCGVSHIEKDKISIPELEGHLLDHTTFPQSVRMYWLPFGAEWNSGMRLLVDDKSCLDMIHELGTATTVDIYTESVDMGGNEESGTQYADEDVFALFQDDNIMDLDHAEPIVKEQIVQNRDKFVQGDNMLCLEGPTHGQDSPNEEAAEDLEAESDGCDATGFTSDEDDEVREIRTKYKEFMSEVKKRGDIPIDNPIEVDGIQGGDIPLGNNQVLEGGDGAEYFDSDGDASYDEDSDGVFTRRKCRFPIFDSFADTPQFAVDMCFRGKDQLKDAIERYALKKKINIRYVKNEQKRIRAVCRWKGCPWLLYASHNSRSDWFQIVTYNPNHACCPELKNKRLSTRRICDRYESTIKANPSWKAREMKETVQEDMGVDVSITMIKRAKAHVMKKIMDTQIGEYSKLFDYALELQRSNPGTSVHVALDPEEEDHVFQRFYVCFDACRRGFLEGCRRIIGLDGCFLKGPLKGELLSAIGRDANNQLYPIAWAVVEYENKDSWNWFLGHLQKDINIPVGAAGWVFITDQQKGLLSIVSTLFPFAEHRMCARHIYANWRKKHRLQEYQKRFWKIAKAPNEQLFNHYKRKLAAKTPRGWQDLEKTNPIHWSRAWFRLGSNCESVDNNMSESFNSWIIESRFKPIITMLEDIRIQVTRRIQENRSNSERWTMTVCPNIIRKFNKIRHRTQFCHVLWNGDAGFEVRDKKWRFTVDLTSKTCSCRYWQVSGIPCQHACAALFKMAQEPNNCIHECFSLERYKKTYQHVLQPVEHESAWPVSPNPKPLPPRVKKMPGRPKKNRRKDPSEPVKSGTKSSKVGTKIRCRRCGNYGHNSRTCCVKMQQEHAESYNPPATNASHSSPLQIEPAQSKQTKGKSIATSSSKSKMPEGSSFIQSGHKRRLVSFGESAQASAKSSAQASAKASAGGSASVVIETNAGTASSFAKATINVKGGHASAKIHSTSLGRGSVSAQSSSSQKNGLLNSKNKMM</aaseq>

Gene Sequence

<dnaseqindica>1..1656#1749..2666#2749..2907#2987..3271#ATGTCTGAATTTGAGGTACTGGAAGTTCAATTTCATTTTAATGGGGAATTTGTTCTTGATGAGTCAAAGATGTCGTATTGCAATGGGGATTGTGGAGTGTCCCACATAGAGAAGGACAAGATCTCTATCCCTGAACTTGAAGGCCACCTATTGGATCACACAACTTTTCCTCAATCTGTTAGGATGTACTGGTTGCCATTTGGTGCAGAATGGAATAGTGGTATGAGGTTACTTGTAGATGACAAGTCATGTTTGGACATGATTCATGAGCTGGGAACTGCTACAACAGTAGATATATACACCGAATCAGTTGATATGGGTGGGAATGAAGAATCTGGAACACAGTATGCAGATGAGGATGTATTTGCCCTATTTCAAGATGATAATATCATGGATTTGGATCATGCAGAACCTATTGTCAAGGAACAAATTGTCCAAAATAGGGACAAATTTGTTCAGGGCGATAACATGCTGTGTTTGGAAGGTCCAACCCATGGTCAGGATAGTCCGAATGAAGAAGCAGCAGAAGATTTAGAAGCAGAGAGTGATGGCTGTGATGCTACAGGTTTCACAAGTGATGAAGATGATGAAGTTAGAGAGATAAGAACCAAATACAAAGAGTTTATGTCAGAAGTAAAGAAGAGAGGAGATATTCCAATAGACAATCCAATTGAGGTTGATGGCATACAAGGTGGAGATATTCCATTGGGTAATAATCAGGTCTTAGAAGGTGGAGATGGTGCTGAATACTTTGATTCAGATGGTGATGCATCGTACGATGAGGACAGTGATGGTGTCTTTACAAGAAGGAAGTGCAGGTTCCCAATATTTGACAGTTTCGCTGATACTCCACAGTTTGCAGTTGACATGTGCTTTAGAGGAAAGGACCAATTGAAGGATGCTATAGAGAGGTATGCTCTGAAGAAGAAGATAAATATCAGATATGTGAAGAATGAGCAGAAAAGGATTAGGGCTGTTTGTAGGTGGAAAGGTTGTCCTTGGCTTCTATATGCTTCCCATAACTCAAGGAGTGATTGGTTTCAGATTGTAACTTATAATCCCAACCATGCTTGTTGTCCTGAGCTTAAAAATAAAAGGTTATCTACAAGAAGGATATGTGATAGGTATGAGAGTACTATCAAGGCTAATCCATCTTGGAAGGCTAGAGAAATGAAGGAGACAGTACAAGAGGACATGGGAGTGGATGTGTCAATCACAATGATTAAGAGAGCAAAGGCACATGTAATGAAGAAAATAATGGATACTCAGATTGGTGAGTATTCCAAGCTGTTTGACTATGCTCTGGAGTTGCAGCGTAGTAATCCTGGAACTAGTGTGCATGTTGCCCTTGACCCAGAGGAAGAGGACCATGTGTTTCAGAGGTTTTATGTATGTTTTGATGCATGTAGAAGAGGATTTTTAGAAGGATGTAGGAGGATAATTGGGCTTGATGGATGTTTCCTTAAGGGGCCATTGAAAGGTGAGTTGTTATCAGCTATTGGCAGGGATGCAAATAATCAGCTTTATCCAATTGCATGGGCTGTTGTGGAATATGAGAATAAAGACTCGTGGAATTGGTTTCTTGGGCATCTTCAGAAAGACATCAACATACCTGTTGGAGCAGCAGGCTGGGTGTTTATAACAGACCAACAGAAGGTAAATTTCTATCTATTTTTGTCCATTTTATGTAGAGGCTTTTTTAATCATTAAAATAAAATGGTTAAATCATTTGTGTCCATTTTATGCAGGGGCTGCTAAGCATAGTATCTACATTGTTTCCATTTGCTGAGCATAGGATGTGTGCACGCCACATATATGCCAATTGGAGAAAGAAACATAGGCTGCAGGAGTACCAAAAGAGGTTTTGGAAGATTGCAAAAGCACCTAATGAGCAGTTGTTTAACCATTACAAGAGAAAGCTTGCTGCAAAAACTCCTCGTGGATGGCAGGATTTGGAGAAAACAAATCCTATTCATTGGTCTCGAGCTTGGTTCAGACTTGGATCAAATTGTGAATCAGTTGACAACAACATGAGTGAATCATTCAATAGTTGGATTATAGAATCAAGGTTCAAGCCTATTATTACTATGCTGGAGGACATTAGGATCCAGGTGACTAGAAGAATCCAAGAAAATAGGAGTAACAGTGAGAGGTGGACTATGACAGTGTGTCCTAACATTATTAGGAAATTCAATAAGATTAGGCATAGGACACAGTTTTGTCATGTCTTGTGGAATGGTGATGCTGGATTTGAAGTGAGAGACAAAAAATGGAGGTTCACAGTAGACCTGACAAGCAAGACATGCTCCTGTAGGTACTGGCAAGTCTCTGGGATTCCATGCCAACATGCTTGTGCTGCCCTATTCAAAATGGCACAAGAGCCTAACAATTGCATACATGAGTGCTTCTCACTTGAGAGATATAAGAAGACATACCAACATGTACTGCAGCCAGTGGAACATGAGTCGGCTTGGCCTGTGTCTCCGAATCCCAAACCATTGCCTCCTAGAGTAAAAAAGATGCCAGGCCGACCAAAGAAAAATAGGAGAAAAGACCCTTCAGAGCCAGTGAAATCTGGAACCAAGTCATCAAAAGTTGGTACTAAAATTAGATGTCGTCGCTGTGGAAATTATGGTCACAACTCGAGGACATGCTGTGTGAAAATGGTGTTTACTGAATTTAATTTTTCCCCTTGCTGCACTATATTCATTCCTTACTCATTTTACTAACTTGGTATGTACTGTACAGCAGCAAGAACACGCTGAGTCATATAATCCTCCCGCCACCAATGCAAGTCACTCAAGCCCATTGCAAATTGAACCTGCACAGTCGAAGCAAACTAAAGGAAAATCCATAGCGACATCATCAAGTAAGAGTAAGATGCCTGAGGGTTCATCATTTATACAGGTTAGTAATAATTACGACATGTCCATGCTATAGCCTAAGTAATTTGTATATTTGCCTAAATTGGCTTTGTTGTTTACAGTCTGGCCATAAGAGAAGACTGGTATCTTTTGGAGAGAGTGCTCAAGCATCTGCGAAGTCAAGTGCTCAAGCATCGGCGAAGGCATCTGCTGGAGGGAGTGCTTCTGTTGTCATTGAAACCAATGCTGGGACTGCTAGCTCATTTGCAAAGGCAACAATCAATGTAAAAGGTGGGCATGCCTCTGCAAAAATCCATTCAACTTCACTTGGTCGTGGATCAGTATCTGCCCAAAGCAGCTCATCACAGAAAAATGGGCTGCTGAATTCCAAGAACAAGATGATGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA017511