BGIOSGA017515

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Revision as of 02:20, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA017515| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA017515, complete gene.| tag = OJ1268_...")
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Gene Name

BGIOSGA017515

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA017515, complete gene.

LocusTag

OJ1268_B08.7

Ensembl Transcript ID

BGIOSGA017515-TA

Ensembl Protein ID

BGIOSGA017515-PA

Length

3492

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:29967108..29970599

Sequence Coding Region

29970366..29970599,29970104..29970277,29969377..29969545,29969193..29969254,29968725..29968849
,29967734..29967851,29967108..29967248

Genome Context

<gbrowseImage1> name=IndicaChromosome05:29967108..29970599 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:29967108..29970599 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAGGCCGTCGCTGCTGAGATACGCCGCGCAGGCGCTCCGCCGCCGCGACTACTCCTCCGCCGCCGCGGCCGCTGAGCGGAAGGTGGCCATCCTCGGGGCGGCGGGCGGGATCGGCCAGCCGCTCGCGCTCCTCATGAAGCTCAACCCGCTCGTCTCGTCCCTCTCCCTCTACGATATCGCCGGAACCCCCGGCGTAGCCGCCGATGTCTCCCACATCAACTCGCCGGCGCTGGTGAAGGGCTTCGTCGGGGAGGAGCAGCTCGGGGAGGCGTTGGAGGGTTCGGACGTCGTAATCATCCCGGCCGGTGTGCCGAGGAAGCCCGGCATGACCAGGGACGACCTCTTCAACATCAACGCCGGCATTGTTAAGGGCCTCTGCACTGCCATCTCCAAGTACTGCCCCAACGCTCTTGTCAATATGATCAGCAACCCTGTCAACTCGACTGTCCCCATCGCAGCGGAGGTGTTCAAGAAGGCTGGTACTTACGATGAGAAGAAACTGTTTGGTGTGACCACGCTTGATGTTGTGCGCGCTAAAACTTTCTATGCTGGAAAGGCTAATGTGCCAGTTACTGAAGTGAATGTCCCTGTGGTTGGTGGCCATGCTGGTATTACTATCCTGCCACTGTTCTCGCAGGCAACCCCTGCAAGTAATGCATTGTCGCATGAGGACATTAAGGCTCTGACCAAGAGGACACAAGATGGTGGGACGGAAGTTGTTGAAGCAAAGGCTGGAAAGGGTTCTGCAACATTGTCTATGGCATATGCTGGTGCGGTATTTGCAGATGCGTGCTTGAAGGGGCTCAATGGAGTTCCTGATGTTGTAGAGTGCTCTTTTGTGCAATCAACAGTAACAGAGCTGCCATTCTTCGCCTCAAAGGTAAGGCTTGGCAAGAACGGAGTGGAGGAAGTACTTGGGCTGGGCCAGCTTTCCGAGTTTGAGAAGGAGGGTCTGGAGAACCTGAAGGGTGAGCTCAAGTCTTCGATTGAGAAGGGCATCAAGTTTGCTCACGCGAACTAG</cdnaseq>

Protein Sequence

<aaseq>MRPSLLRYAAQALRRRDYSSAAAAAERKVAILGAAGGIGQPLALLMKLNPLVSSLSLYDIAGTPGVAADVSHINSPALVKGFVGEEQLGEALEGSDVVIIPAGVPRKPGMTRDDLFNINAGIVKGLCTAISKYCPNALVNMISNPVNSTVPIAAEVFKKAGTYDEKKLFGVTTLDVVRAKTFYAGKANVPVTEVNVPVVGGHAGITILPLFSQATPASNALSHEDIKALTKRTQDGGTEVVEAKAGKGSATLSMAYAGAVFADACLKGLNGVPDVVECSFVQSTVTELPFFASKVRLGKNGVEEVLGLGQLSEFEKEGLENLKGELKSSIEKGIKFAHAN</aaseq>

Gene Sequence

<dnaseqindica>1..234#323..496#1055..1223#1346..1407#1751..1875#2749..2866#3352..3492#ATGAGGCCGTCGCTGCTGAGATACGCCGCGCAGGCGCTCCGCCGCCGCGACTACTCCTCCGCCGCCGCGGCCGCTGAGCGGAAGGTGGCCATCCTCGGGGCGGCGGGCGGGATCGGCCAGCCGCTCGCGCTCCTCATGAAGCTCAACCCGCTCGTCTCGTCCCTCTCCCTCTACGATATCGCCGGAACCCCCGGCGTAGCCGCCGATGTCTCCCACATCAACTCGCCGGCGCTGGTACGTCTCCACCCACCCGCCTGCATCCCTCTCCTGGCTGGATCTAGCCGTGTGACGATGCTGGGTTTTGGATTCTGCTCCTCCGCAGGTGAAGGGCTTCGTCGGGGAGGAGCAGCTCGGGGAGGCGTTGGAGGGTTCGGACGTCGTAATCATCCCGGCCGGTGTGCCGAGGAAGCCCGGCATGACCAGGGACGACCTCTTCAACATCAACGCCGGCATTGTTAAGGGCCTCTGCACTGCCATCTCCAAGTACTGCCCCAACGTAAGCACCCTAACTTTGATTTACACTGTAGAGTTTAGATATGCAGTGAGGTTCATGGATCTGGTTGTGAAGCATGCTGATTGCGCTGGTCACGGCTTGGGGATTGCACTTCATTGCCCATCGTGTAGATCTAGCGTTTATTTGTGGTCTCGGATCGTACACTGACATAAAACTGATGATGGAGACTAAAATAGCTGGTTGCCCCCAAAATTCAGTGAGAATTTAATAGTGACAAGGACTTGATGGGAATAGAAATGGACGTTTTGCCCAAATTCATTGAGATTTAATACTATAGGAAGGTGAGGTGCTAGTTGCCTGCCTCAATGTTGTGTGGTGTCGCTCGAGGCTGCCTCAATGTTGTGTGGTGTCTCACTCGAGGAGGCTCGCTCTCACCAGGCCTTGTTTTGCTCCATTTAATCGCATACCGCTGAGAACGAATGGGATGTTAGATTGTGTTCTGTGCATGTCTACTCCAATATATCAGCTGACCATTATGAAGTTTATTGTGCTCACTATATATGAATACAATTGTTAATCTTTTGATTGTATGCTTTTTAGGCTCTTGTCAATATGATCAGCAACCCTGTCAACTCGACTGTCCCCATCGCAGCGGAGGTGTTCAAGAAGGCTGGTACTTACGATGAGAAGAAACTGTTTGGTGTGACCACGCTTGATGTTGTGCGCGCTAAAACTTTCTATGCTGGAAAGGCTAATGTGCCAGTTACTGGTATGACCTTGATCTTTTACTCATAATTTTAGGGGACATTGACATTAAATATAGCTGTGGATTTTATGATAAAATTTTATCTCCGCTTTTCTAATCTTTGTGATTGCTGTGATCTTCTGCAGAAGTGAATGTCCCTGTGGTTGGTGGCCATGCTGGTATTACTATCCTGCCACTGTTCTCGCAGGTATCATAGCTTACGATCTTGTTTTTTGCAATTTCCTTCCGTGGTTACCCACTTTGAGCTCAATATACATATACAGAGTGTAAATACTCGATGATGATGATGATAGAACCTCATAGAATAGGTGTTGGAATCCTGCATGTTTTAAGCTTGCTGTATAAACATGCATTTTTTATTCAATGAAGAGGTTGTGCTTTGTGGATTGGAGTCAATACAGAATGGTTATCTTCATTTGACAATCACGAAAACAATATGCAATTGATGTCATGGAATTTTTTCAAAAAATCAAAGTGCATTTATGGCGTGTGGCCTACCTCCTAACGGACTAATTTTTTGTGTGATGTAGGCAACCCCTGCAAGTAATGCATTGTCGCATGAGGACATTAAGGCTCTGACCAAGAGGACACAAGATGGTGGGACGGAAGTTGTTGAAGCAAAGGCTGGAAAGGGTTCTGCAACATTGTCTATGGCGTAAGTCTTCATATCAACCTTAACCAACTATATCCTTAGTTTACTAGTTAGTCTGTCAATATTAGTATGCTACTATGCCTATTTGTGATATTCTTGATAAAACATCAGGAAAAAGTTCTCATAATTTGCAACCAACCGATCCCTTGGATGTTCTTGCCATCCTTTAGATATGCATGCTTCAAAGTACATTGCCTCTAGGTTCAACATATTGGCTTCAGAGTACATATATGCTTGGTTCTGTCCATTGGATGTTAGCTGGTTATATATTTTCCTTTAAAAGTCCTGTCCACTTGCTTCCAGACTGTCGCGGAGTTGTTTTTTCTATTCTTTATAGATCCTACTCCATCTATGAGATGTTAGTTGGTATATATTTGCCTATTGCACTATTGCCCGCTGGCTTTAAAAAAAAACAGTAGCAACATATCAGCAAAATTCAGTTCTAACTTCTTGCTGTTCCCATGCCCATTTGATTTTCATTGCAGCAAAGCTTTACTGTCATAATTGGATATATTTAGGTTGCAATGCTGCCAATAATAGATGGAAACCAAAATTTTTCCATCCCATGATTATACACTTTTTATAAACAGTTGGCATATCTGAGCTTGTTTTCAGTTCTTGTATGCAATGCAATTGTACAAACTAATTTATCCAAATGAATTTCCCCTTCTGCCTTATAACTCTCTGTTATTGCTTTCATGTGAGCACACATGCATTCAAATCTCGGAAACATATTTGTGCTCATTTGGCTCATTGTGCTGGAGTACTATCTGGAACTGGAATGAATAGGCCACTTGGATCCATGTAGATAAACTGTGATTTTATGGCTTTGCAAGTTTGTATACTTCGCCCTGACATACTTCTCCTTTTCCCTAGATATGCTGGTGCGGTATTTGCAGATGCGTGCTTGAAGGGGCTCAATGGAGTTCCTGATGTTGTAGAGTGCTCTTTTGTGCAATCAACAGTAACAGAGCTGCCATTCTTCGCCTCAAAGGTGTTTTTCTTGCTTCTTTATGGCATTGTTATGTTGCTACCAGATTTCTATCGCTAGATCTTCACAGCTCTTGCTTTTTCTTTCTTTTCCCACTATTATTTCCGTAAACAGGTTATGGATGCAACATACAATGTGTTATAGACAGTTCTACTATATGTCTTCTCACATTTATTGACTGAAGTATAGAACTATTGCAGCTTGTGTTCATTTGTTAATAGCAGCTGTTCTATGGTCATAGTTTGAAGATTTGAATGGAATAGTTTGTAGTAGCAATAGATATGTTTACCACCAGGGACTAAGCTTTTACAATATTTGTTGTGTTCCGCTGCCTTTTCAGTTAGTTGCAAGTTGCAACAGATCATCTCTTATCTTTGGTTGGATCAAAATAGCTTTTAAGACACCTTTTTATTTAAATGTGCTGTTCTATCGTTGTACTGTTGTCTTGGCTGTGGTTTGAACACTGTTTCGTTACTTGTATCCTTCAGGTAAGGCTTGGCAAGAACGGAGTGGAGGAAGTACTTGGGCTGGGCCAGCTTTCCGAGTTTGAGAAGGAGGGTCTGGAGAACCTGAAGGGTGAGCTCAAGTCTTCGATTGAGAAGGGCATCAAGTTTGCTCACGCGAACTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA017515