BGIOSGA017521

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Revision as of 02:20, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA017521| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA017521, complete gene.| tag = OJ1735_...")
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Gene Name

BGIOSGA017521

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA017521, complete gene.

LocusTag

OJ1735_C10.16

Ensembl Transcript ID

BGIOSGA017521-TA

Ensembl Protein ID

BGIOSGA017521-PA

Length

5379

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:29897494..29902872

Sequence Coding Region

29902755..29902872,29901717..29901796,29901312..29901398,29900826..29900876,29900610..29900727
,29900374..29900430,29900211..29900275,29900026..29900109,29899863..29899913
,29899717..29899779,29899588..29899634,29899420..29899498,29899256..29899318
,29899007..29899096,29898868..29898906,29898562..29898789,29898383..29898468
,29898235..29898283,29898068..29898148,29897890..29897983,29897494..29897690

Genome Context

<gbrowseImage1> name=IndicaChromosome05:29897494..29902872 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:29897494..29902872 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAAGTACGTGCTGGTGACGGGCGGGGTGGTGAGCGGCCTCGGGAAGGGGGTGACGGCGAGCAGCATCGGCGTCGTGCTCAAGGACTGCGGCCTCCGCGTCACCTCCATCAAGATCGATCCTTACCTCAACACCGATGCTGGAACCATGTCTCCATTCGAGCACGGTGAAGTGTTTGTTTTGGACGATGGTGGTGAGGTGGACTTGGACCTTGGAAATTATGAGCGATTTCTGGACATCAAGTTGACTCGTGACAACAATATAACCACGGGAAAGATCTATCAGGCTGTTATTGACAAGGAACGAAGAGGAGACTACTTGGGAAAAACTGTTCAGGTTGTACCACACATTACGGATGAAATACAGGAGTGGATTGAACGTGTGGCAATGAATCCAGTTGATGGCACAAATGAGCCAGCTGATGTTTGTGTAATAGAACTTGGTGGCACTATAGGGGATATTGAATCAATGCCTTTTATTGAAGCATTAGGTCAATTTTCATACCGCGTAGGGGCTGGAAACTTTTGCCTAGTTCATGTCAGTCTTGTACCAGTTCTAAATGTAGTTGGTGAACAGAAAACCAAACCTACCCAACATAGTGTCCGTGGACTAAGAGGACTTGGACTGATACCTGATATTTTAGCATGTCGCAGTACTCAGCCACTTGAAGAAAATGTGAAAGTGAAACTCGCACAATTTTGCCACGTTCCGATCTCAAATATTGTCAATCTTCACGATGTTACCAACATCTGGCACATCCCTTTGTTGCTTAGGGACCAGAAGGCTCATGAATCTATTCTGAAAGTTTTAGATCTTCAATGTGTGGGAAAAGTGCCTCGAGCACCTAAGCTGACTGAATGGACTGAAAGAGCCAGCAAATTCGACAAACTGAAAACTCCTGTTAGGATTGCCATGGTTGGAAAGTATACTGGCCTATCAGACTCCTACTTGTCAGTTTTGAAGGCTCTTCTGCATGCATCGGTTGCTTTGGACAGAAAACTTGTGGTGGATTGGGTTCCTTCCTGTGATCTTGAAGATTCTGCAGCCACAGAGACTCCTGATGCATATGAAAAAGCTTGGGATCTACTAAAGGGTGCACATGGTGTACTAGTTCCAGGAGGCTTTGGAGATAGAGGGGTCCAGGGAAAAATTCTTGCTGCAAAATATGCGCGAGAAAACAATGTTCCATATCTTGGTATTTGCCTGGGCATGCAAATTGCAGTGATCGAATTCGCCCGCTCTGTCATGAAGTTGCGTGGTGCTAATAGTACAGAGTTTGATCCAGCTACAACGACGCCATGTGTTATTTTCATGCCAGAGGGCTCTAAAACCCATATGGGGGCAACAATGCGCCTTGGATCAAGGAGGACCTTCTTCCAGGCCAATACATGCAAATCAGCTAAGCTGTATGGCAATGCAAGCTATGTAGATGAAAGGCACCGCCACCGATATGAGGTGAATCCTGAAATGGTTCCAGAATTTGAGAAGGCAGGTCTCTCTTTTGTTGGCAGGGATGAAAGCGGGACACGCATGGAGATAATTGAGCTACCAACTCATAGGTTTTTTGTTGGCGCACAATTTCATCCTGAATTCAAGTCAAGACCTGGAAAGCCATCCCCACTTTTCATGGGATTAATAGCAGCTTCATCAGGACAGCTTGACCATTTACTTCAGCAATCTTGCGGCGTTGTCAGCTCGCCAGTCAGACGTGGCAACTACTGCAACGGAGCCACGAAACAACAGAAGCTATACCAAAATGGACATGTCAAGAACGGCCTGGTGAATGGCTGCTACTATGCAAACGGCAACAGCATTCTTCATACTTAG</cdnaseq>

Protein Sequence

<aaseq>MKYVLVTGGVVSGLGKGVTASSIGVVLKDCGLRVTSIKIDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFLDIKLTRDNNITTGKIYQAVIDKERRGDYLGKTVQVVPHITDEIQEWIERVAMNPVDGTNEPADVCVIELGGTIGDIESMPFIEALGQFSYRVGAGNFCLVHVSLVPVLNVVGEQKTKPTQHSVRGLRGLGLIPDILACRSTQPLEENVKVKLAQFCHVPISNIVNLHDVTNIWHIPLLLRDQKAHESILKVLDLQCVGKVPRAPKLTEWTERASKFDKLKTPVRIAMVGKYTGLSDSYLSVLKALLHASVALDRKLVVDWVPSCDLEDSAATETPDAYEKAWDLLKGAHGVLVPGGFGDRGVQGKILAAKYARENNVPYLGICLGMQIAVIEFARSVMKLRGANSTEFDPATTTPCVIFMPEGSKTHMGATMRLGSRRTFFQANTCKSAKLYGNASYVDERHRHRYEVNPEMVPEFEKAGLSFVGRDESGTRMEIIELPTHRFFVGAQFHPEFKSRPGKPSPLFMGLIAASSGQLDHLLQQSCGVVSSPVRRGNYCNGATKQQKLYQNGHVKNGLVNGCYYANGNSILHT</aaseq>

Gene Sequence

<dnaseqindica>1..118#1077..1156#1475..1561#1997..2047#2146..2263#2443..2499#2598..2662#2764..2847#2960..3010#3094..3156#3239..3285#3375..3453#3555..3617#3777..3866#3967..4005#4084..4311#4405..4490#4590..4638#4725..4805#4890..4983#5183..5379#ATGAAGTACGTGCTGGTGACGGGCGGGGTGGTGAGCGGCCTCGGGAAGGGGGTGACGGCGAGCAGCATCGGCGTCGTGCTCAAGGACTGCGGCCTCCGCGTCACCTCCATCAAGATCGGTAACTCCCGCCGCTCCCGCCTCCGCCGCCGCCCGTTTTTCTCTCTCCCCCGAAACGCCGCCGTACTTGGCGGGTGCCGTTTAATTATTTTTTTCCTCGGTCAAAAATAGGCCGCAGCGTAATGGGTGGCCACGTGATCGCACAGAGCACGAACGCCACGCATCCCCGTACATACTAGACTGCACTTCTAACCATATACTAATACCGAATCATTTTTCTTTCATTTGGTTAAACTAGCTAGCTACTCCTCGAGATCACTAAACTGGAGAAAACACAGTTAAAATTCTTGTTTTTTTATAAAAAAATTGTTTTAAAGATGATGGGCTCTTGGATGGATGGATGGATAAAGCTCTGATCTTTCTTGTTAACGGGAATGGAAGTGCTAACCTTTCTGCAATCTCAACAGTGCCATGTTGCACTTTTAGTGATCTTGTTTCCTCACTTCTCTTTCGCTGTAGTTCATCTTTTATTATTATTATTATTTTGGGACTAACAAAGTCGTTCCCTCCTCCTCCTTTTGAACCAACCATTTCATGTTTCATTTCTTTTGAACTGTAATTATACTCGTCGTTGCTCACTGATGAGGTGGCCATCTGATACTGTGTCAGTGTCACTGTCTTGGTTCCTTGAAACAGATGAGTTTCTATATTTTATATGGGTGTAGTAATACAGGTCAAATTTGTCATCTCGTGCTATGAAAATTTGTCTTAACTGATAGCTTTGTCTCTTCATCCAGAGGCCAGGTGCTGCGCACCTTTCTTGGGTCTAGTACTTAAACTATTATTTTTCTTGTCTCGTCACTTGCAACCTCCTTGACTGTTTGTGTTCATTTTTTAGGTACTAAGTCTGTACAGTATGTTAGTAAATTAGTGAACAAGTTTATGAAATAGTTTTGGCTTTGTCATGTGATGATCGATGACCCTTCTGATCTTTTACCTTTGTTACTGCTTTGCTGCAGATCCTTACCTCAACACCGATGCTGGAACCATGTCTCCATTCGAGCACGGTGAAGTGTTTGTTTTGGACGATGGTGGTGAGGTAGCAGCTCTGCTTCACCATCTCCTTTCGGCTTTCACTTAGCTATTTCATTATGAGATAGTCGCAGAGAGTGCACCATAGGTTACAAAATGCACGCCAGAAACTGCACTGCACTGACTCGAGCATATTCTCCTCATGCTTGGCTTGAATTATCATGGACTAGCAGTTGGTCACTAGCAGCATTCCATGCACTTGTCCTGTTGTCCACTTGTTTGTAGAAAGGAGGTTCCATTGTAGAGTGTGTGTTTTTGTGATAACTACAAAATTTTCTTTCTTTGACTAAACTGAACTTCATTTCGTTCTCTCTTTTTGTCTAAGGTGGACTTGGACCTTGGAAATTATGAGCGATTTCTGGACATCAAGTTGACTCGTGACAACAATATAACCACGGGAAAGATCTATCAGGTAATTGGAATAAAGAGTCTCTATCTGAGTGCGCACAAGACTTTCAGTATGACTTGCTTTCTAGTCCAAAGTTGTGGTTTATATCTCACACCACAGATCTTTTTCTATTCCGTTTTATGTTACATCCCAAGATCTCCTACAGTTCAATTATACATGTGGACAATATCCTGGTTCTGTAGTCTAAAGGCTGGTGATAGACATGTCGATATTGAACCTGTCATAGGGTAGATTCACCGTGAGCAGTTTGAATGTCAAGCTGCAGCTGTTTGCTATCATGCAACTGTCGGTATTTCAGGACCTCTTGAGTATTATATGCTTCTATGAGCATAGATACCCTGCTAATTATACCTATTTTTCTAAGAGTAAATTTAAACTTAACAAGAATTTATCGTCTACTAATTATTAATATTTTTTCTTGTAATTCCCAAACTGCAGGCTGTTATTGACAAGGAACGAAGAGGAGACTACTTGGGAAAAACTGTTCAGGTGAGAATTGGTAATTAGAATTTCATCTCTTGTTTTTTCTGTTCTATAACTTAGTTGATGATGAATTTGCTGAATTCTGAGTTAATTCACTTTATCAGGTTGTACCACACATTACGGATGAAATACAGGAGTGGATTGAACGTGTGGCAATGAATCCAGTTGATGGCACAAATGAGCCAGCTGATGTTTGTGTAATAGAACTTGGTGGCACTATAGGTGAAAAACAGACTACTGAAGCAAACCACATCATTTTTTAGAAAATAATAACACTGCACAGTTTTGAGCACCACAGAATATACTATTCTCTGCTCAATTGTTCCCATAGTTGTTCTAGTATTCCGATGCAGGAGACAAAATCTTTTCGCCACATAACGACAGTGGCATTCTTGATGCAGGGGATATTGAATCAATGCCTTTTATTGAAGCATTAGGTCAATTTTCATACCGCGTAGGTGAGAAAACAGTGGTCTCCATAGCTATTTATTTCTATTTTCTTTCATTTGCAAACAGAATTTAACTCCTACTGATCATTTTCCAATTTGTGTTTCAGGGGCTGGAAACTTTTGCCTAGTTCATGTCAGTCTTGTACCAGTTCTAAATGTAGTTGGTGAACAGGTACTTATTCCTCATGTGGAGGCACCACAATTCATCTAAATACAGTGTCACAGTCATAAAAATATGCATTTTTCTTGACTTTTCCTATGAATCTTTTGTAGAAAACCAAACCTACCCAACATAGTGTCCGTGGACTAAGAGGACTTGGACTGATACCTGATATTTTAGCATGTCGCAGTACTCAGGTACTCAATCATGCAGTAGTAGCACTTGTTTTTGTATTTACGTTTCCTTCAAAAGTGTTGTTTTCGGTCTGATGGTGGCTTTATACATTGCTTGCTTTGTGCTTTCTGACAGCCACTTGAAGAAAATGTGAAAGTGAAACTCGCACAATTTTGCCACGTTCCGGTAACAATGTTGCTTTCACCAAGTATTTCTAAATGTATTTTGCTCCGGGCAACCTGAATTCTTAGTTTGATTTCATATTGCAGATCTCAAATATTGTCAATCTTCACGATGTTACCAACATCTGGCACATCCCTTTGTTGCTTAGGGTATGTCACATAAAACTTGTCCCAGTACATGGATGGTATTATTTTTAAAATAATCTCAGTAACAACTTGTGCTTTCTTATAGGACCAGAAGGCTCATGAATCTATTCTGAAAGTTTTAGATCTTCAATGGTATGTCTGCTGGCCAAAGATACGATGAACTCAACACCTGGAGTCATTTCTTTTCATGACTTAAATGTATTCTTGGTTGTGACATGTAGTGTGGGAAAAGTGCCTCGAGCACCTAAGCTGACTGAATGGACTGAAAGAGCCAGCAAATTCGACAAACTGAAAACTCCTGTTAGTCTCATTTTACTCTGAACTTTTGCTTTTAGATATACATCAGTACATGTACATGATCAATAATTTGGTGCTCATAGTCACTGCGAACATATTTGCAGGTTAGGATTGCCATGGTTGGAAAGTATACTGGCCTATCAGACTCCTACTTGTCAGTTTTGAAGGTGACTTTTCTGACTGACTTGGACATGTATTTGTGCATCAGTCAACAGCTGTTCAGTTGCTGCTAGACATGCTTCCGAGCTTGTTGGTGTTAGCAATACATTGGATATATCCCTTTCAACTAGATTTTGGGGCATTACCTAGTTCAGTATTCCTTTCAGGCTCTTCTGCATGCATCGGTTGCTTTGGACAGAAAACTTGTGGTGGATTGGGTTCCTTCCTGTGATCTTGAAGATTCTGCAGCCACAGAGGTCAGTTTTATGCATTTTGTTTTTGATTCTGTTCAATTCTGATTCCCACATTGTAGAGTGCATAGTTTACTGATGCTTGGGGAATGGTTGCCTTGTGCAGACTCCTGATGCATATGAAAAAGCTTGGGATCTACTAAAGGTAAGTACAGCACATATTACCAGGTGATGAGGTGATCCATTCTGCAGAACTTTGAAGGATGTTCCTCTTCCTCCTCAGGGTGCACATGGTGTACTAGTTCCAGGAGGCTTTGGAGATAGAGGGGTCCAGGGAAAAATTCTTGCTGCAAAATATGCGCGAGAAAACAATGTTCCATATCTTGGTATTTGCCTGGGCATGCAAATTGCAGTGATCGAATTCGCCCGCTCTGTCATGAAGTTGCGTGGTGCTAATAGTACAGAGTTTGATCCAGCTACAACGACGCCATGTGTTATTTTCATGCCAGAGGTAATTCCATTTCCAGTTATTGAATTTGGAAAATGCTCTTTATTTTCATAATTAACTTAATGTTTTCCCTGTACTTTGGCAATGATTCTGCAGGGCTCTAAAACCCATATGGGGGCAACAATGCGCCTTGGATCAAGGAGGACCTTCTTCCAGGCCAATACATGCAAATCAGCTAAGCTGTAAGGGAACTCTTACCCTCATCATGCACTAATGTCTTTAAAACAGTTTCAAAATTTGTGTTTATCTAAATAATCGTTACAAAATCTGGACTGGATTAGGTATGGCAATGCAAGCTATGTAGATGAAAGGCACCGCCACCGATATGAGGTTTGTTGAGTAGAATCATCCCACGTTAGAAATTTCCTTTTATTCTCAGTTCAGTTTGCTGACAAAAACATCTTGTTATCTTTTAGGTGAATCCTGAAATGGTTCCAGAATTTGAGAAGGCAGGTCTCTCTTTTGTTGGCAGGGATGAAAGCGGGACACGCATGGAGGTAAAACTTACTGAACTTTTTTTGTTATTAGAACCCGTCAATATATTCACCACTTGCTAATGTATAATGTTTTACTGGATGCAGATAATTGAGCTACCAACTCATAGGTTTTTTGTTGGCGCACAATTTCATCCTGAATTCAAGTCAAGACCTGGAAAGCCATCCCCACTTTTCATGGGTAAATCAGCCTTTCACCTCTACCTCATCTTGCCTGAAACATATATGCTATTTATTTATCTTTTCAAGCCAAATGATCAATTTCGTTTGCAAAGCCGAATAGTTAAACTAAACAATATGCCTGAATTTCAAGCCAAATGATCAATTTTGCTGGCAAAGCTGAATACTTAAACTAAACTAAATGCCTGAATGATTAACAGGATTAATAGCAGCTTCATCAGGACAGCTTGACCATTTACTTCAGCAATCTTGCGGCGTTGTCAGCTCGCCAGTCAGACGTGGCAACTACTGCAACGGAGCCACGAAACAACAGAAGCTATACCAAAATGGACATGTCAAGAACGGCCTGGTGAATGGCTGCTACTATGCAAACGGCAACAGCATTCTTCATACTTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA017521