Os11g0640000

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Revision as of 09:17, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0640000| Description = NB-ARC domain containing protein| Version = NM_001074878.2 GI:297612257 GeneID:4350997| Length = 1947 bp| Definitio...")
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Gene Name

Os11g0640000

Description

NB-ARC domain containing protein

Version

NM_001074878.2 GI:297612257 GeneID:4350997

Length

1947 bp

Definition

Oryza sativa Japonica Group Os11g0640000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:27158730..27160676

Sequence Coding Region

27158730..27160676

Expression

GEO Profiles:Os11g0640000

Genome Context

<gbrowseImage1> name=NC_008404:27158730..27160676 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:27158730..27160676 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtccactcctgaagctgaagctgaaggtgaaggtggatgcatcctcttctccaagtacatcgacgacggcatcctcacccctctcctctccagcctgcaggtcatcggcgacgccaagagcttccgcggcgctgagagcagctccgacctcgctcagctcgacagcatccgtgacatgatgagagaactccaagctatctttgtcaagatgggcgagaatgagaggcgcatcgtccacctcttcgaccccatcgaggagctcgtcgacgacgtactcaattccctcgccgccggcggcgagatctccacgctccagccgaagctcgccggtgtcggagtacagattggcatcatcagggaggcaatctcaggatcctataagataaagatacaagaggaaccatctccggacagaggaagggatgtggaggattcggcttctgcgccgacgatggcagggataaggagatgtgtccgtgacggcgagcagatggcgcacctgcggcgagccgtgcacggtatggatgagcagttgaggcattgcctcctctgccttgcagccttccccgagggcgccgtcataaaaaagcggctcctcatccactggtggatcggcgaaaagttcgtgtcatccttggaggacggcaatgagttgttccagcagctcgtcgacttgcggttcgtgcgcacagtccgccgccgggggcactgcgacaccgcccacgcgtgcaccgtgcacccgtggatccgcaggatgctcgtggccgttgcaaggagcagcgcgttcttggagattgatccggatggcaatggcgcctccgcctcaaacaacgatttctctaggacgcaccgcgcatgcctgcacgatggcgggctgctccagggctccaggttccacccgcagctctccacgatctacaacgttggccagagctatgtcaagctgagcaccgcgtggttcacctacagatcgcaactcggcacggtgcagctcgggcagtggcgggtggctgacccagtcgaccagattgcctatccaaggaagagccacatcgagctgatcgacgaccaccacctcaaggggatcggggcgtgcaagaacctgaggtacctcagcttgagaggcatatcgagaattatggccatcccggctgccattggagaactggccgagctggtcgtgttggatctcagggcgtgccacgatctgcaggtgctggcaaaggagatcaccaagctgcagaagctccagtatctggatgtctccgagtgctacctgctcgttgatatgcccgagggattcaacaagatgtctcagctccaagtcctcaaagggtttttggtagtaaactctaacaaaagaaacacctgcaatctgggcgagttggtaagcttgagcaaccttcgcaaacttagcatcagtgttagcaagaaactgaagcgtgcagaagatgagctgaaagtgcttgccaattttgccagtctcgcatcactgaagattacatggggaatggtatctccacgagatgctgccgacgaatcagatgctgcaaaatttaaccttgttcttccctctaatctttcaaagctggatctctactgcttcccgtcgagacaatttgggacgattagttctgacagtttaaagaaactgtattttactggtgggaagttgcatagtctggaaattcagaatggggagtgcaaagtagaggtgctgcgcttgagatgcctcaaggatctgcagttttgttgggaggaattgcgtgaactgtatccaatgctggagtttgtcgaagctcagcactgctcaggagtagctaattggccgctagacaacaataaagtatggacgaaggatgctgaaaccagtaatgctgcttctgcacagtctgaagaaccaactgcgcctgatgtttgtcctgaaattgtggaagagggataa</cdnaseq>

Protein Sequence

<aaseq>MSTPEAEAEGEGGCILFSKYIDDGILTPLLSSLQVIGDAKSFRG AESSSDLAQLDSIRDMMRELQAIFVKMGENERRIVHLFDPIEELVDDVLNSLAAGGEI STLQPKLAGVGVQIGIIREAISGSYKIKIQEEPSPDRGRDVEDSASAPTMAGIRRCVR DGEQMAHLRRAVHGMDEQLRHCLLCLAAFPEGAVIKKRLLIHWWIGEKFVSSLEDGNE LFQQLVDLRFVRTVRRRGHCDTAHACTVHPWIRRMLVAVARSSAFLEIDPDGNGASAS NNDFSRTHRACLHDGGLLQGSRFHPQLSTIYNVGQSYVKLSTAWFTYRSQLGTVQLGQ WRVADPVDQIAYPRKSHIELIDDHHLKGIGACKNLRYLSLRGISRIMAIPAAIGELAE LVVLDLRACHDLQVLAKEITKLQKLQYLDVSECYLLVDMPEGFNKMSQLQVLKGFLVV NSNKRNTCNLGELVSLSNLRKLSISVSKKLKRAEDELKVLANFASLASLKITWGMVSP RDAADESDAAKFNLVLPSNLSKLDLYCFPSRQFGTISSDSLKKLYFTGGKLHSLEIQN GECKVEVLRLRCLKDLQFCWEELRELYPMLEFVEAQHCSGVANWPLDNNKVWTKDAET SNAASAQSEEPTAPDVCPEIVEEG</aaseq>

Gene Sequence

<dnaseqindica>1..1947#atgtccactcctgaagctgaagctgaaggtgaaggtggatgcatcctcttctccaagtacatcgacgacggcatcctcacccctctcctctccagcctgcaggtcatcggcgacgccaagagcttccgcggcgctgagagcagctccgacctcgctcagctcgacagcatccgtgacatgatgagagaactccaagctatctttgtcaagatgggcgagaatgagaggcgcatcgtccacctcttcgaccccatcgaggagctcgtcgacgacgtactcaattccctcgccgccggcggcgagatctccacgctccagccgaagctcgccggtgtcggagtacagattggcatcatcagggaggcaatctcaggatcctataagataaagatacaagaggaaccatctccggacagaggaagggatgtggaggattcggcttctgcgccgacgatggcagggataaggagatgtgtccgtgacggcgagcagatggcgcacctgcggcgagccgtgcacggtatggatgagcagttgaggcattgcctcctctgccttgcagccttccccgagggcgccgtcataaaaaagcggctcctcatccactggtggatcggcgaaaagttcgtgtcatccttggaggacggcaatgagttgttccagcagctcgtcgacttgcggttcgtgcgcacagtccgccgccgggggcactgcgacaccgcccacgcgtgcaccgtgcacccgtggatccgcaggatgctcgtggccgttgcaaggagcagcgcgttcttggagattgatccggatggcaatggcgcctccgcctcaaacaacgatttctctaggacgcaccgcgcatgcctgcacgatggcgggctgctccagggctccaggttccacccgcagctctccacgatctacaacgttggccagagctatgtcaagctgagcaccgcgtggttcacctacagatcgcaactcggcacggtgcagctcgggcagtggcgggtggctgacccagtcgaccagattgcctatccaaggaagagccacatcgagctgatcgacgaccaccacctcaaggggatcggggcgtgcaagaacctgaggtacctcagcttgagaggcatatcgagaattatggccatcccggctgccattggagaactggccgagctggtcgtgttggatctcagggcgtgccacgatctgcaggtgctggcaaaggagatcaccaagctgcagaagctccagtatctggatgtctccgagtgctacctgctcgttgatatgcccgagggattcaacaagatgtctcagctccaagtcctcaaagggtttttggtagtaaactctaacaaaagaaacacctgcaatctgggcgagttggtaagcttgagcaaccttcgcaaacttagcatcagtgttagcaagaaactgaagcgtgcagaagatgagctgaaagtgcttgccaattttgccagtctcgcatcactgaagattacatggggaatggtatctccacgagatgctgccgacgaatcagatgctgcaaaatttaaccttgttcttccctctaatctttcaaagctggatctctactgcttcccgtcgagacaatttgggacgattagttctgacagtttaaagaaactgtattttactggtgggaagttgcatagtctggaaattcagaatggggagtgcaaagtagaggtgctgcgcttgagatgcctcaaggatctgcagttttgttgggaggaattgcgtgaactgtatccaatgctggagtttgtcgaagctcagcactgctcaggagtagctaattggccgctagacaacaataaagtatggacgaaggatgctgaaaccagtaatgctgcttctgcacagtctgaagaaccaactgcgcctgatgtttgtcctgaaattgtggaagagggataa</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0640000, RefSeq:Os11g0640000