BGIOSGA017537

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Revision as of 02:20, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA017537| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA017537, complete gene.| tag = OS05G05...")
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Gene Name

BGIOSGA017537

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA017537, complete gene.

LocusTag

OS05G0569700

Ensembl Transcript ID

BGIOSGA017537-TA

Ensembl Protein ID

BGIOSGA017537-PA

Length

2670

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:29694400..29697069

Sequence Coding Region

29696971..29697069,29696796..29696858,29696673..29696719,29696514..29696583,29696152..29696214
,29695840..29695878,29695531..29695758,29695204..29695289,29695070..29695118
,29694877..29694957,29694686..29694779,29694400..29694521

Genome Context

<gbrowseImage1> name=IndicaChromosome05:29694400..29697069 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:29694400..29697069 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAAGTACGTGGTGGTGATGGGAGGCGTGATCAGCGGCCTCGGCAAGGGGGTGACGGCGAGCAGCATTGGCGTCGTCCTCAAGGCGTGCGGCCTCCGCGTAGCTAACATTTTTACTCTGTATGATGTTTCAAACATCTGGCGTGTTCCTCTGTTATTGCGGGACCAAAAGGCAGATCAAGCTATTCTTAAAGTTTTGAATCTTGAAAGCGTTGCCGAAGAGCCTAACTTGGAGGAATGGATGGCAAGGGCTGATCTATATGACACTTTACATGAAACAGTCAGGATTGCCATGGTTGGAAAATATACCGGTGTATCTGATACATACCTTTCTGTGATGAAGGCACCTGATGCTTACAGCACAGCATGGAGTTTACTGAGGGGTGCAGATGGCATTTTAGTACCTGGTGGCTTTGGAGAAAGAGGTGTTGAGGGGAAAATATTGGCCGCCAAGCACGCCCGCGAAAACGATGTCCCTTTCCTGGGCATATGCCTTGGCATGCAGCTCGCCGTGGTAGAATTCGCATGCCATGTTTTGAAACTGCCTGATGCGAACAGCACAGAGTTTGATGCCAAAACGGAGAACCCATGTGTAATTATAATGCCAGAGTGCTCCAACGAAGGAAAGGGTGGTACCATGCGGCGTGGATCAAAGAGGACATTTTTCAAGGTTGCAAATAGCAAGTCTGCCAAGCTATATGGTAGCGTCAACCACATAGATGAGAGGTTTCGGCACAGATACCAGGTAAATCCCAATGTGGTGCAATTATTTGAGAACAATGGGCTTCAGGTTGTAGGCACAGACAAGACCGGAGAAATTGTGCAGATCGTCGAAATACCCAATCATCGATTTTTCGTTGGCGTTCAATTTCACCCCGAGTTTATGTCGAGACCTTCGAAACCTTCCGCACTTTTTGTCGGACTAATCGCTGCATCGTGTGGGCAACTGGATGGTGTGCTGCAAGATGCGGCTTGTAACCATGAGCCACAGCAGAATCAGCGTGCAGAGAAGCGTCCTGCTGCTAGTGATCTAGGAGATTGA</cdnaseq>

Protein Sequence

<aaseq>MKYVVVMGGVISGLGKGVTASSIGVVLKACGLRVANIFTLYDVSNIWRVPLLLRDQKADQAILKVLNLESVAEEPNLEEWMARADLYDTLHETVRIAMVGKYTGVSDTYLSVMKAPDAYSTAWSLLRGADGILVPGGFGERGVEGKILAAKHARENDVPFLGICLGMQLAVVEFACHVLKLPDANSTEFDAKTENPCVIIMPECSNEGKGGTMRRGSKRTFFKVANSKSAKLYGSVNHIDERFRHRYQVNPNVVQLFENNGLQVVGTDKTGEIVQIVEIPNHRFFVGVQFHPEFMSRPSKPSALFVGLIAASCGQLDGVLQDAACNHEPQQNQRAEKRPAASDLGD</aaseq>

Gene Sequence

<dnaseqindica>1..99#212..274#351..397#487..556#856..918#1192..1230#1312..1539#1781..1866#1952..2000#2113..2193#2291..2384#2549..2670#ATGAAGTACGTGGTGGTGATGGGAGGCGTGATCAGCGGCCTCGGCAAGGGGGTGACGGCGAGCAGCATTGGCGTCGTCCTCAAGGCGTGCGGCCTCCGCGTTACGTCCATTAAGATCGGTACCAACACGTGCTTCTTCTTGGCTTTTAGTTAATGATTATTTTCAGCAACTAATTGCTCTAGTTGCTAATGAACTCTTGTGGTCATCGCAGGTAGCTAACATTTTTACTCTGTATGATGTTTCAAACATCTGGCGTGTTCCTCTGTTATTGCGGGTAAACAGCTTTCTTATACACCAGACGAAAATTTTCACCCTTGCACTGTGCTGAATATCTTCCTCCATCGTTTTAGGACCAAAAGGCAGATCAAGCTATTCTTAAAGTTTTGAATCTTGAAAGGTAAAATTTCCATGTGTCATATATATATGTAAGTTGAAGGTGTCATGCTGCTATACGCAATCCTAAATTCTCCTTTATCTCATTTGCAGCGTTGCCGAAGAGCCTAACTTGGAGGAATGGATGGCAAGGGCTGATCTATATGACACTTTACATGAAACAGTCAGCCTCTTTTTCATCCTTTTTTAAATAACGGATTTTTCATAAATCCGGTCTTTATATTTACGAAAGATATACGCATCCAATATTTTTTATCCTCGTGATGGAAACGAAAAGGATATTTGAGATTACATTAAAAAAGGAAAAATATATACGTTCTATTGTTTTTCTTACTAACACTGATGTGTCATGGTGTGAGTACATCTAGATTTATCTAAATCAAACTATTGAGATCATTGTTAGTAAAAGTTCAGTAAGAAAAATTTAGAAAGACCTAAGCAATCTGTGTACTCTTTTTTCAGGTCAGGATTGCCATGGTTGGAAAATATACCGGTGTATCTGATACATACCTTTCTGTGATGAAGGTGGGATGGATGGATCCCTATGGTGTTTTCTTCCTTCAGTCCATTATAAACCTCATCGGTTTTGTCCAACATATTTTTTGATTTGCAATTCTTGTAGGCTCTTCTACATGCTTGTATAGCTTGTGGCAGAAAACTTCTTGTTGATTGGGTTCCTTCCACCGATCTTGAGGATTCAACTGCCAGTGTGGTTTGAAAAACTTACACTATGCATCATATTTTGCTCTGTAGTATATATATTTGTCTCCTTACATGTTTTTTGTTAAATTTTAATAGGCACCTGATGCTTACAGCACAGCATGGAGTTTACTGAGGGTGAGAAGTTTACTCCTGAAATATTTGCTACATGTAGAATTTTTATTATATATGCTTTATCTGAAATATATTTCATTTCAGGGTGCAGATGGCATTTTAGTACCTGGTGGCTTTGGAGAAAGAGGTGTTGAGGGGAAAATATTGGCCGCCAAGCACGCCCGCGAAAACGATGTCCCTTTCCTGGGCATATGCCTTGGCATGCAGCTCGCCGTGGTAGAATTCGCATGCCATGTTTTGAAACTGCCTGATGCGAACAGCACAGAGTTTGATGCCAAAACGGAGAACCCATGTGTAATTATAATGCCAGAGGTAATTAACTGTCAAACCCTCAGTCTATATATATAGATATGATTGTAACATTTATATCCACTCGTGAATATCAATATCAGATTTCTATTTATTGTGTAAAAACGTGTATCTGCCTTTAGTTTTTTTTTTAGAAAAATGTGTTGCATTTAGGTGTATGTACTGGTTAGCTATAAACTTAATTTAGGCCATGAGTTACTTGTTTCCTTAAATAAGTAGCTTAATTTACTTGCATTTCCTTCAGTGCTCCAACGAAGGAAAGGGTGGTACCATGCGGCGTGGATCAAAGAGGACATTTTTCAAGGTTGCAAATAGCAAGTCTGCCAAGCTGTGAGTGATCATGAACACTTACCCTTACTGTAATTGCATTGTTTCTGTTTTAATTTTCTGTGTTAATTACGTTGCAATCACTCAGATATGGTAGCGTCAACCACATAGATGAGAGGTTTCGGCACAGATACCAGGTTTGTTGTTCAATATCTTTATTGTAGTTCATCATAATGTTACTCATGGTGTTTTAATTGCTTTTTTACCTTTTTTTAAAAAAAAGAACTGTGATATTGACTAACTTCCCAGGTAAATCCCAATGTGGTGCAATTATTTGAGAACAATGGGCTTCAGGTTGTAGGCACAGACAAGACCGGAGAAATTGTGCAGGTACAAGCTGAAGAACCCAGCTTGCTCGAACAAATTTCAACTTTTCACTTTTCCATTATTCATGCATGCTGATGTTATTGTTTGTCCAATTTTCTAGATCGTCGAAATACCCAATCATCGATTTTTCGTTGGCGTTCAATTTCACCCCGAGTTTATGTCGAGACCTTCGAAACCTTCCGCACTTTTTGTCGGTAAGCTACTTAAACCTCTGTAAACGACCCAAGGGAAGTTGATATATATCTTTCTTTTGAAAAAAAAAAACAAGTTAGCGATGTAATATCAACATACCGCTTTCTCGAGTACCGTCAAAATTTCTGTCTTTGACAATCTGATCAACATGTATACCGACCTGCAGGACTAATCGCTGCATCGTGTGGGCAACTGGATGGTGTGCTGCAAGATGCGGCTTGTAACCATGAGCCACAGCAGAATCAGCGTGCAGAGAAGCGTCCTGCTGCTAGTGATCTAGGAGATTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA017537